RNA–Protein interactions for RNA: ENST00000558474.1

VPS18-202, Transcript of VPS18, CORVET/HOPS core subunit, humanhuman

TSL 3 BASIC

Gene VPS18, Length 873 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS18-202ENST00000558474 ZSWIM9Q86XI8 627 aa14.92□□□□□ -0.02
VPS18-202ENST00000558474 LMNTD2Q8IXW0 634 aa14.92□□□□□ -0.02
VPS18-202ENST00000558474 TTC30BQ8N4P2 665 aa14.92□□□□□ -0.02
VPS18-202ENST00000558474 MDGA1Q8NFP4 955 aa14.92□□□□□ -0.02
VPS18-202ENST00000558474 RPLP0P6Q8NHW5 317 aa14.92□□□□□ -0.02
VPS18-202ENST00000558474 SCG3Q8WXD2 468 aaKnown RBP14.92□□□□□ -0.02
VPS18-202ENST00000558474 CFAP36Q96G28 342 aa14.92□□□□□ -0.02
VPS18-202ENST00000558474 SGSM3Q96HU1 749 aa14.92□□□□□ -0.02
VPS18-202ENST00000558474 CYTH2Q99418 400 aa14.92□□□□□ -0.02
VPS18-202ENST00000558474 TMEM109Q9BVC6 243 aa14.92□□□□□ -0.02
VPS18-202ENST00000558474 ACSS3Q9H6R3 686 aa14.92□□□□□ -0.02
VPS18-202ENST00000558474 LMAN1LQ9HAT1 526 aa14.92□□□□□ -0.02
VPS18-202ENST00000558474 ZFYVE1Q9HBF4 777 aa14.92□□□□□ -0.02
VPS18-202ENST00000558474 CD248Q9HCU0 757 aa14.92□□□□□ -0.02
VPS18-202ENST00000558474 RAD18Q9NS91 495 aa14.92□□□□□ -0.02
VPS18-202ENST00000558474 NLE1Q9NVX2 485 aaPredicted RBP14.92□□□□□ -0.02
VPS18-202ENST00000558474 SARDHQ9UL12 918 aa14.92□□□□□ -0.02
VPS18-202ENST00000558474 SPO11Q9Y5K1 396 aa14.92□□□□□ -0.02
VPS18-202ENST00000558474 ZNF106Q9H2Y7 1883 aaKnown RBP14.91□□□□□ -0.02
VPS18-202ENST00000558474 TCRBV9S1A1TA0A576 114 aa14.91□□□□□ -0.02
VPS18-202ENST00000558474 RGSL1A5PLK6 1076 aa14.91□□□□□ -0.02
VPS18-202ENST00000558474 H7C0S8 307 aa14.91□□□□□ -0.02
VPS18-202ENST00000558474 PSMD11O00231 422 aa14.91□□□□□ -0.02
VPS18-202ENST00000558474 SLC7A4O43246 635 aa14.91□□□□□ -0.02
VPS18-202ENST00000558474 AP1G1O43747 822 aa14.91□□□□□ -0.02
VPS18-202ENST00000558474 CD72P21854 359 aa14.91□□□□□ -0.02
VPS18-202ENST00000558474 TARSP26639 723 aaKnown RBP14.91□□□□□ -0.02
VPS18-202ENST00000558474 VIPR1P32241 457 aa14.91□□□□□ -0.02
VPS18-202ENST00000558474 ABL2P42684 1182 aa14.91□□□□□ -0.02
VPS18-202ENST00000558474 MAGEA9P43362 315 aa14.91□□□□□ -0.02
VPS18-202ENST00000558474 RPS9P46781 194 aaKnown RBP14.91□□□□□ -0.02
VPS18-202ENST00000558474 DGKEP52429 567 aa14.91□□□□□ -0.02
VPS18-202ENST00000558474 ZXDAP98168 799 aa14.91□□□□□ -0.02
VPS18-202ENST00000558474 SEPT6Q14141 434 aa14.91□□□□□ -0.02
VPS18-202ENST00000558474 CDKN3Q16667 212 aa14.91□□□□□ -0.02
VPS18-202ENST00000558474 LONRF1Q17RB8 773 aa14.91□□□□□ -0.02
VPS18-202ENST00000558474 PDPK2PQ6A1A2 396 aa14.91□□□□□ -0.02
VPS18-202ENST00000558474 FBXL19Q6PCT2 694 aa14.91□□□□□ -0.02
VPS18-202ENST00000558474 ERN2Q76MJ5 926 aaKnown RBP14.91□□□□□ -0.02
VPS18-202ENST00000558474 DPPA4Q7L190 304 aa14.91□□□□□ -0.02
VPS18-202ENST00000558474 PARS2Q7L3T8 475 aaKnown RBP14.91□□□□□ -0.02
VPS18-202ENST00000558474 MMAAQ8IVH4 418 aaKnown RBP14.91□□□□□ -0.02
VPS18-202ENST00000558474 SIX5Q8N196 739 aa14.91□□□□□ -0.02
VPS18-202ENST00000558474 CBARPQ8N350 705 aaPredicted RBP14.91□□□□□ -0.02
VPS18-202ENST00000558474 CDKL2Q92772 493 aa14.91□□□□□ -0.02
VPS18-202ENST00000558474 FAM131CQ96AQ9 280 aa14.91□□□□□ -0.02
VPS18-202ENST00000558474 CLDN23Q96B33 292 aa14.91□□□□□ -0.02
VPS18-202ENST00000558474 ARRDC3Q96B67 414 aa14.91□□□□□ -0.02
VPS18-202ENST00000558474 ZNF669Q96BR6 464 aaPredicted RBP14.91□□□□□ -0.02
VPS18-202ENST00000558474 MFSD3Q96ES6 412 aa14.91□□□□□ -0.02
VPS18-202ENST00000558474 GPR63Q9BZJ6 419 aa14.91□□□□□ -0.02
VPS18-202ENST00000558474 CDH19Q9H159 772 aa14.91□□□□□ -0.02
VPS18-202ENST00000558474 PLAC1Q9HBJ0 212 aa14.91□□□□□ -0.02
VPS18-202ENST00000558474 POLMQ9NP87 494 aaPredicted RBP14.91□□□□□ -0.02
VPS18-202ENST00000558474 NSMCE4AQ9NXX6 385 aa14.91□□□□□ -0.02
VPS18-202ENST00000558474 RABGEF1Q9UJ41 708 aa14.91□□□□□ -0.02
VPS18-202ENST00000558474 PKP3Q9Y446 797 aa14.91□□□□□ -0.02
VPS18-202ENST00000558474 PRUNE2Q8WUY3 3088 aa14.91□□□□□ -0.02
VPS18-202ENST00000558474 C1orf232A0A0U1RR37 186 aa14.9□□□□□ -0.02
VPS18-202ENST00000558474 ANTXRLA6NF34 631 aa14.9□□□□□ -0.02
VPS18-202ENST00000558474 FAM170BA6NMN3 283 aa14.9□□□□□ -0.02
VPS18-202ENST00000558474 STX7O15400 261 aaKnown RBP14.9□□□□□ -0.02
VPS18-202ENST00000558474 RPP40O75818 363 aaKnown RBP14.9□□□□□ -0.02
VPS18-202ENST00000558474 DNTTP04053 509 aa14.9□□□□□ -0.02
VPS18-202ENST00000558474 ALPIP09923 528 aa14.9□□□□□ -0.02
VPS18-202ENST00000558474 ADRB3P13945 408 aa14.9□□□□□ -0.02
VPS18-202ENST00000558474 CTPS1P17812 591 aa14.9□□□□□ -0.02
VPS18-202ENST00000558474 NMBRP28336 390 aa14.9□□□□□ -0.02
VPS18-202ENST00000558474 WASP42768 502 aa14.9□□□□□ -0.02
VPS18-202ENST00000558474 PSMD8P48556 350 aa14.9□□□□□ -0.02
VPS18-202ENST00000558474 ZNF140P52738 457 aaPredicted RBP14.9□□□□□ -0.02
VPS18-202ENST00000558474 RPS14P62263 151 aaKnown RBP14.9□□□□□ -0.02
VPS18-202ENST00000558474 MGAT5Q09328 741 aa14.9□□□□□ -0.02
VPS18-202ENST00000558474 FZD5Q13467 585 aa14.9□□□□□ -0.02
VPS18-202ENST00000558474 ARHGEF7Q14155 803 aa14.9□□□□□ -0.02
VPS18-202ENST00000558474 RASA2Q15283 850 aa14.9□□□□□ -0.02
VPS18-202ENST00000558474 CRY1Q16526 586 aa14.9□□□□□ -0.02
VPS18-202ENST00000558474 TJAP1Q5JTD0 557 aa14.9□□□□□ -0.02
VPS18-202ENST00000558474 CRTC1Q6UUV9 634 aa14.9□□□□□ -0.02
VPS18-202ENST00000558474 USP30Q70CQ3 517 aa14.9□□□□□ -0.02
VPS18-202ENST00000558474 KBTBD6Q86V97 674 aa14.9□□□□□ -0.02
VPS18-202ENST00000558474 OR13J1Q8NGT2 312 aa14.9□□□□□ -0.02
VPS18-202ENST00000558474 CALML6Q8TD86 181 aa14.9□□□□□ -0.02
VPS18-202ENST00000558474 DTX3LQ8TDB6 740 aa14.9□□□□□ -0.02
VPS18-202ENST00000558474 FBF1Q8TES7 1133 aa14.9□□□□□ -0.02
VPS18-202ENST00000558474 CERS2Q96G23 380 aa14.9□□□□□ -0.02
VPS18-202ENST00000558474 FCRL3Q96P31 734 aaPredicted RBP14.9□□□□□ -0.02
VPS18-202ENST00000558474 RUFY1Q96T51 708 aa14.9□□□□□ -0.02
VPS18-202ENST00000558474 PCDH12Q9NPG4 1184 aa14.9□□□□□ -0.02
VPS18-202ENST00000558474 ZDHHC4Q9NPG8 344 aa14.9□□□□□ -0.02
VPS18-202ENST00000558474 KCTD5Q9NXV2 234 aa14.9□□□□□ -0.02
VPS18-202ENST00000558474 IL17CQ9P0M4 197 aa14.9□□□□□ -0.02
VPS18-202ENST00000558474 SLC24A2Q9UI40 661 aa14.9□□□□□ -0.02
VPS18-202ENST00000558474 PLAAQ9Y263 795 aa14.9□□□□□ -0.02
VPS18-202ENST00000558474 ARL5AQ9Y689 179 aa14.9□□□□□ -0.02
VPS18-202ENST00000558474 NFS1Q9Y697 457 aa14.9□□□□□ -0.02
VPS18-202ENST00000558474 SCN8AQ9UQD0 1980 aa14.9□□□□□ -0.02
VPS18-202ENST00000558474 F5P12259 2224 aa14.9□□□□□ -0.02
VPS18-202ENST00000558474 NPIPB15A6NHN6 443 aaPredicted RBP14.89□□□□□ -0.03
VPS18-202ENST00000558474 FAM159BA6NKW6 160 aa14.89□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 9.6 ms