RNA–Protein interactions for RNA: ENST00000558103.1

CLPX-202, Transcript of caseinolytic mitochondrial matrix peptidase chaperone subunit, humanhuman

TSL 5

Gene CLPX, Length 605 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPX-202ENST00000558103 TMEM9BQ9NQ34 198 aa6.36□□□□□ -1.39
CLPX-202ENST00000558103 TMEM30AQ9NV96 361 aa6.36□□□□□ -1.39
CLPX-202ENST00000558103 INTS13Q9NVM9 706 aa6.36□□□□□ -1.39
CLPX-202ENST00000558103 CDH9Q9ULB4 789 aa6.36□□□□□ -1.39
CLPX-202ENST00000558103 CHST2Q9Y4C5 530 aa6.36□□□□□ -1.39
CLPX-202ENST00000558103 ZSCAN21Q9Y5A6 473 aaPredicted RBP6.36□□□□□ -1.39
CLPX-202ENST00000558103 SRPRBQ9Y5M8 271 aaKnown RBP6.36□□□□□ -1.39
CLPX-202ENST00000558103 CLIC4Q9Y696 253 aa6.36□□□□□ -1.39
CLPX-202ENST00000558103 MORC2Q9Y6X9 1032 aaPredicted RBP6.36□□□□□ -1.39
CLPX-202ENST00000558103 NYNRINQ9P2P1 1898 aaKnown RBP6.36□□□□□ -1.39
CLPX-202ENST00000558103 MUC22E2RYF6 1773 aaPredicted RBP6.36□□□□□ -1.39
CLPX-202ENST00000558103 GON4LQ3T8J9 2241 aa6.35□□□□□ -1.39
CLPX-202ENST00000558103 ITPR1Q14643 2758 aa6.35□□□□□ -1.39
CLPX-202ENST00000558103 BAHCC1Q9P281 2608 aa6.35□□□□□ -1.39
CLPX-202ENST00000558103 ZNF840PA6NDX5 716 aa6.35□□□□□ -1.39
CLPX-202ENST00000558103 F8VP50 259 aa6.35□□□□□ -1.39
CLPX-202ENST00000558103 SGK1O00141 431 aa6.35□□□□□ -1.39
CLPX-202ENST00000558103 KIAA0391O15091 583 aaKnown RBP6.35□□□□□ -1.39
CLPX-202ENST00000558103 TEX33O43247 280 aa6.35□□□□□ -1.39
CLPX-202ENST00000558103 TOP3BO95985 862 aaKnown RBP6.35□□□□□ -1.39
CLPX-202ENST00000558103 RAP2AP10114 183 aa6.35□□□□□ -1.39
CLPX-202ENST00000558103 CEACAM1P13688 526 aa6.35□□□□□ -1.39
CLPX-202ENST00000558103 FPR1P21462 350 aa6.35□□□□□ -1.39
CLPX-202ENST00000558103 BDNFP23560 247 aa6.35□□□□□ -1.39
CLPX-202ENST00000558103 HOXD13P35453 343 aa6.35□□□□□ -1.39
CLPX-202ENST00000558103 P2RY2P41231 377 aa6.35□□□□□ -1.39
CLPX-202ENST00000558103 SLC16A1P53985 500 aa6.35□□□□□ -1.39
CLPX-202ENST00000558103 CACNA2D1P54289 1103 aa6.35□□□□□ -1.39
CLPX-202ENST00000558103 RNASE9P60153 205 aaKnown RBP6.35□□□□□ -1.39
CLPX-202ENST00000558103 MRPS21P82921 87 aaKnown RBP6.35□□□□□ -1.39
CLPX-202ENST00000558103 MYO1EQ12965 1108 aa6.35□□□□□ -1.39
CLPX-202ENST00000558103 KLF10Q13118 480 aa6.35□□□□□ -1.39
CLPX-202ENST00000558103 RESTQ13127 1097 aa6.35□□□□□ -1.39
CLPX-202ENST00000558103 CUL4AQ13619 759 aa6.35□□□□□ -1.39
CLPX-202ENST00000558103 MAPRE1Q15691 268 aaKnown RBP6.35□□□□□ -1.39
CLPX-202ENST00000558103 FAM102AQ5T9C2 384 aaPredicted RBP6.35□□□□□ -1.39
CLPX-202ENST00000558103 RRAGBQ5VZM2 374 aa6.35□□□□□ -1.39
CLPX-202ENST00000558103 RHOUQ7L0Q8 258 aa6.35□□□□□ -1.39
CLPX-202ENST00000558103 MRGPREQ86SM8 312 aa6.35□□□□□ -1.39
CLPX-202ENST00000558103 CBWD2Q8IUF1 395 aa6.35□□□□□ -1.39
CLPX-202ENST00000558103 WDR49Q8IV35 697 aa6.35□□□□□ -1.39
CLPX-202ENST00000558103 RHOT1Q8IXI2 618 aa6.35□□□□□ -1.39
CLPX-202ENST00000558103 SYCP3Q8IZU3 236 aa6.35□□□□□ -1.39
CLPX-202ENST00000558103 ALLCQ8N6M5 410 aa6.35□□□□□ -1.39
CLPX-202ENST00000558103 IL17RCQ8NAC3 791 aa6.35□□□□□ -1.39
CLPX-202ENST00000558103 MYCBPAPQ8TBZ2 947 aa6.35□□□□□ -1.39
CLPX-202ENST00000558103 HPDLQ96IR7 371 aa6.35□□□□□ -1.39
CLPX-202ENST00000558103 ANKRD36BP1Q96IX9 119 aa6.35□□□□□ -1.39
CLPX-202ENST00000558103 C8orf48Q96LL4 319 aa6.35□□□□□ -1.39
CLPX-202ENST00000558103 TEKT5Q96M29 485 aa6.35□□□□□ -1.39
CLPX-202ENST00000558103 FNBP1Q96RU3 617 aa6.35□□□□□ -1.39
CLPX-202ENST00000558103 MRPL45Q9BRJ2 306 aaKnown RBP6.35□□□□□ -1.39
CLPX-202ENST00000558103 TMEM74BQ9NUR3 256 aa6.35□□□□□ -1.39
CLPX-202ENST00000558103 ZIM2Q9NZV7 527 aa6.35□□□□□ -1.39
CLPX-202ENST00000558103 ZNF180Q9UJW8 692 aa6.35□□□□□ -1.39
CLPX-202ENST00000558103 RALYQ9UKM9 306 aaKnown RBP6.35□□□□□ -1.39
CLPX-202ENST00000558103 ACTL7AQ9Y615 435 aa6.35□□□□□ -1.39
CLPX-202ENST00000558103 CPQQ9Y646 472 aa6.35□□□□□ -1.39
CLPX-202ENST00000558103 PKD1L2Q7Z442 2459 aa6.35□□□□□ -1.39
CLPX-202ENST00000558103 VPS37CA5D8V6 355 aaPredicted RBP6.34□□□□□ -1.39
CLPX-202ENST00000558103 ZNF185O15231 689 aa6.34□□□□□ -1.39
CLPX-202ENST00000558103 TACC1O75410 805 aa6.34□□□□□ -1.39
CLPX-202ENST00000558103 KAT7O95251 611 aa6.34□□□□□ -1.39
CLPX-202ENST00000558103 TNNC2P02585 160 aa6.34□□□□□ -1.39
CLPX-202ENST00000558103 SLPIP03973 132 aa6.34□□□□□ -1.39
CLPX-202ENST00000558103 IDEP14735 1019 aa6.34□□□□□ -1.39
CLPX-202ENST00000558103 DDCP20711 480 aa6.34□□□□□ -1.39
CLPX-202ENST00000558103 ANXA13P27216 316 aa6.34□□□□□ -1.39
CLPX-202ENST00000558103 STAT6P42226 847 aa6.34□□□□□ -1.39
CLPX-202ENST00000558103 PTGER3P43115 390 aa6.34□□□□□ -1.39
CLPX-202ENST00000558103 PPP3CCP48454 512 aa6.34□□□□□ -1.39
CLPX-202ENST00000558103 DHPSP49366 369 aaPredicted RBP6.34□□□□□ -1.39
CLPX-202ENST00000558103 CHN2P52757 468 aa6.34□□□□□ -1.39
CLPX-202ENST00000558103 IRX4P78413 519 aa6.34□□□□□ -1.39
CLPX-202ENST00000558103 TAF10Q12962 218 aa6.34□□□□□ -1.39
CLPX-202ENST00000558103 MTM1Q13496 603 aa6.34□□□□□ -1.39
CLPX-202ENST00000558103 PIN1Q13526 163 aaPredicted RBP6.34□□□□□ -1.39
CLPX-202ENST00000558103 ODF1Q14990 250 aa6.34□□□□□ -1.39
CLPX-202ENST00000558103 MDH1BQ5I0G3 518 aa6.34□□□□□ -1.39
CLPX-202ENST00000558103 FAM173BQ6P4H8 233 aa6.34□□□□□ -1.39
CLPX-202ENST00000558103 RHBDF2Q6PJF5 856 aa6.34□□□□□ -1.39
CLPX-202ENST00000558103 CCDC73Q6ZRK6 1079 aa6.34□□□□□ -1.39
CLPX-202ENST00000558103 SEM1Q6ZVN7 128 aa6.34□□□□□ -1.39
CLPX-202ENST00000558103 EPM2AIP1Q7L775 607 aaPredicted RBP6.34□□□□□ -1.39
CLPX-202ENST00000558103 TRAPPC11Q7Z392 1133 aa6.34□□□□□ -1.39
CLPX-202ENST00000558103 RAVER1Q8IY67 606 aaKnown RBP6.34□□□□□ -1.39
CLPX-202ENST00000558103 CCDC33Q8N5R6 958 aa6.34□□□□□ -1.39
CLPX-202ENST00000558103 FRMD1Q8N878 549 aa6.34□□□□□ -1.39
CLPX-202ENST00000558103 RLN3Q8WXF3 142 aa6.34□□□□□ -1.39
CLPX-202ENST00000558103 HDAC10Q969S8 669 aa6.34□□□□□ -1.39
CLPX-202ENST00000558103 USP28Q96RU2 1077 aa6.34□□□□□ -1.39
CLPX-202ENST00000558103 PNKPQ96T60 521 aa6.34□□□□□ -1.39
CLPX-202ENST00000558103 ZNF518BQ9C0D4 1074 aa6.34□□□□□ -1.39
CLPX-202ENST00000558103 ELOVL4Q9GZR5 314 aa6.34□□□□□ -1.39
CLPX-202ENST00000558103 DPEP3Q9H4B8 488 aa6.34□□□□□ -1.39
CLPX-202ENST00000558103 ZDHHC4Q9NPG8 344 aa6.34□□□□□ -1.39
CLPX-202ENST00000558103 PANK4Q9NVE7 773 aa6.34□□□□□ -1.39
CLPX-202ENST00000558103 GEMIN8Q9NWZ8 242 aaKnown RBP6.34□□□□□ -1.39
CLPX-202ENST00000558103 EHD2Q9NZN4 543 aa6.34□□□□□ -1.39
CLPX-202ENST00000558103 SLC23A1Q9UHI7 598 aa6.34□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms