RNA–Protein interactions for RNA: ENST00000558065.1

SEMA4B-204, Transcript of semaphorin 4B, humanhuman

TSL 1 (best)

Gene SEMA4B, Length 3,751 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4B-204ENST00000558065 TCN1P20061 433 aaPredicted RBP11.07□□□□□ -0.64
SEMA4B-204ENST00000558065 EIF1P41567 113 aaKnown RBP11.07□□□□□ -0.64
SEMA4B-204ENST00000558065 NSMFQ6X4W1 530 aa11.07□□□□□ -0.64
SEMA4B-204ENST00000558065 SYDE1Q6ZW31 735 aaPredicted RBP11.07□□□□□ -0.64
SEMA4B-204ENST00000558065 CHSY3Q70JA7 882 aa11.07□□□□□ -0.64
SEMA4B-204ENST00000558065 ZBTB33Q86T24 672 aa11.07□□□□□ -0.64
SEMA4B-204ENST00000558065 LINC00523Q86TU6 105 aa11.07□□□□□ -0.64
SEMA4B-204ENST00000558065 TRAF3IP1Q8TDR0 691 aaPredicted RBP11.07□□□□□ -0.64
SEMA4B-204ENST00000558065 DDX1Q92499 740 aaKnown RBP11.07□□□□□ -0.64
SEMA4B-204ENST00000558065 FBXL20Q96IG2 436 aa11.07□□□□□ -0.64
SEMA4B-204ENST00000558065 NTPCRQ9BSD7 190 aaKnown RBP11.07□□□□□ -0.64
SEMA4B-204ENST00000558065 RTKNQ9BST9 563 aa11.07□□□□□ -0.64
SEMA4B-204ENST00000558065 FAM126AQ9BYI3 521 aaPredicted RBP11.07□□□□□ -0.64
SEMA4B-204ENST00000558065 TRIM8Q9BZR9 551 aa11.07□□□□□ -0.64
SEMA4B-204ENST00000558065 RSAD1Q9HA92 442 aa11.07□□□□□ -0.64
SEMA4B-204ENST00000558065 NMUR1Q9HB89 426 aa11.07□□□□□ -0.64
SEMA4B-204ENST00000558065 XYLBO75191 536 aa11.06□□□□□ -0.64
SEMA4B-204ENST00000558065 PIAS1O75925 651 aa11.06□□□□□ -0.64
SEMA4B-204ENST00000558065 TNNI3P19429 210 aa11.06□□□□□ -0.64
SEMA4B-204ENST00000558065 OXTRP30559 389 aa11.06□□□□□ -0.64
SEMA4B-204ENST00000558065 KCNJ5P48544 419 aa11.06□□□□□ -0.64
SEMA4B-204ENST00000558065 GBX2P52951 348 aaPredicted RBP11.06□□□□□ -0.64
SEMA4B-204ENST00000558065 ZNF91Q05481 1191 aa11.06□□□□□ -0.64
SEMA4B-204ENST00000558065 PTPN11Q06124 597 aaPredicted RBP11.06□□□□□ -0.64
SEMA4B-204ENST00000558065 DRAP1Q14919 205 aaPredicted RBP11.06□□□□□ -0.64
SEMA4B-204ENST00000558065 PTPRRQ15256 657 aa11.06□□□□□ -0.64
SEMA4B-204ENST00000558065 IKBIPQ70UQ0 350 aa11.06□□□□□ -0.64
SEMA4B-204ENST00000558065 OR6C4Q8NGE1 309 aa11.06□□□□□ -0.64
SEMA4B-204ENST00000558065 SLCO4A1Q96BD0 722 aa11.06□□□□□ -0.64
SEMA4B-204ENST00000558065 UHRF1Q96T88 793 aaPredicted RBP11.06□□□□□ -0.64
SEMA4B-204ENST00000558065 SLC52A2Q9HAB3 445 aa11.06□□□□□ -0.64
SEMA4B-204ENST00000558065 KCNQ5Q9NR82 932 aa11.06□□□□□ -0.64
SEMA4B-204ENST00000558065 COL20A1Q9P218 1284 aa11.06□□□□□ -0.64
SEMA4B-204ENST00000558065 IFT80Q9P2H3 777 aaPredicted RBP11.06□□□□□ -0.64
SEMA4B-204ENST00000558065 TNPO3Q9Y5L0 923 aaKnown RBP11.06□□□□□ -0.64
SEMA4B-204ENST00000558065 COL4A3BPQ9Y5P4 624 aa11.06□□□□□ -0.64
SEMA4B-204ENST00000558065 MARF1Q9Y4F3 1742 aaKnown RBP11.06□□□□□ -0.64
SEMA4B-204ENST00000558065 LMTK3Q96Q04 1460 aa11.06□□□□□ -0.64
SEMA4B-204ENST00000558065 LOC102724428A0A0B4J2F2 783 aa11.06□□□□□ -0.64
SEMA4B-204ENST00000558065 WDPCPO95876 746 aa11.06□□□□□ -0.64
SEMA4B-204ENST00000558065 COX4I1P13073 169 aa11.06□□□□□ -0.64
SEMA4B-204ENST00000558065 UCHL3P15374 230 aa11.06□□□□□ -0.64
SEMA4B-204ENST00000558065 SYN1P17600 705 aa11.06□□□□□ -0.64
SEMA4B-204ENST00000558065 KCNA5P22460 613 aa11.06□□□□□ -0.64
SEMA4B-204ENST00000558065 GLDCP23378 1020 aa11.06□□□□□ -0.64
SEMA4B-204ENST00000558065 SIK1P57059 783 aa11.06□□□□□ -0.64
SEMA4B-204ENST00000558065 RAB14P61106 215 aa11.06□□□□□ -0.64
SEMA4B-204ENST00000558065 MERTKQ12866 999 aa11.06□□□□□ -0.64
SEMA4B-204ENST00000558065 MPP7Q5T2T1 576 aa11.06□□□□□ -0.64
SEMA4B-204ENST00000558065 IZUMO3Q5VZ72 239 aa11.06□□□□□ -0.64
SEMA4B-204ENST00000558065 LAMTOR1Q6IAA8 161 aa11.06□□□□□ -0.64
SEMA4B-204ENST00000558065 C11orf63Q6NUN7 778 aa11.06□□□□□ -0.64
SEMA4B-204ENST00000558065 CNNM4Q6P4Q7 775 aa11.06□□□□□ -0.64
SEMA4B-204ENST00000558065 POLNQ7Z5Q5 900 aa11.06□□□□□ -0.64
SEMA4B-204ENST00000558065 GPALPP1Q8IXQ4 340 aa11.06□□□□□ -0.64
SEMA4B-204ENST00000558065 MPP5Q8N3R9 675 aa11.06□□□□□ -0.64
SEMA4B-204ENST00000558065 ATG4AQ8WYN0 398 aa11.06□□□□□ -0.64
SEMA4B-204ENST00000558065 PROX1Q92786 737 aa11.06□□□□□ -0.64
SEMA4B-204ENST00000558065 NFASCO94856 1347 aa11.06□□□□□ -0.64
SEMA4B-204ENST00000558065 SCN4AP35499 1836 aa11.06□□□□□ -0.64
SEMA4B-204ENST00000558065 PEAK1Q9H792 1746 aa11.06□□□□□ -0.64
SEMA4B-204ENST00000558065 CNTNAP1P78357 1384 aa11.06□□□□□ -0.64
SEMA4B-204ENST00000558065 B4GAT1O43505 415 aa11.06□□□□□ -0.64
SEMA4B-204ENST00000558065 HS6ST1O60243 411 aa11.06□□□□□ -0.64
SEMA4B-204ENST00000558065 KRT19P08727 400 aa11.06□□□□□ -0.64
SEMA4B-204ENST00000558065 ERP29P30040 261 aaKnown RBP11.06□□□□□ -0.64
SEMA4B-204ENST00000558065 DPP6P42658 865 aa11.06□□□□□ -0.64
SEMA4B-204ENST00000558065 RGS1Q08116 209 aa11.06□□□□□ -0.64
SEMA4B-204ENST00000558065 SLAMF1Q13291 335 aa11.06□□□□□ -0.64
SEMA4B-204ENST00000558065 SMAD2Q15796 467 aaKnown RBP11.06□□□□□ -0.64
SEMA4B-204ENST00000558065 ABRAXAS1Q6UWZ7 409 aa11.06□□□□□ -0.64
SEMA4B-204ENST00000558065 BTN2A1Q7KYR7 527 aa11.06□□□□□ -0.64
SEMA4B-204ENST00000558065 RHOUQ7L0Q8 258 aa11.06□□□□□ -0.64
SEMA4B-204ENST00000558065 SLC44A2Q8IWA5 706 aaPredicted RBP11.06□□□□□ -0.64
SEMA4B-204ENST00000558065 CTAGE3PQ8IX95 158 aa11.06□□□□□ -0.64
SEMA4B-204ENST00000558065 OFCC1Q8IZS5 231 aa11.06□□□□□ -0.64
SEMA4B-204ENST00000558065 DYNC2LI1Q8TCX1 351 aa11.06□□□□□ -0.64
SEMA4B-204ENST00000558065 MARK4Q96L34 752 aa11.06□□□□□ -0.64
SEMA4B-204ENST00000558065 SLIRPQ9GZT3 109 aaKnown RBP11.06□□□□□ -0.64
SEMA4B-204ENST00000558065 THAP2Q9H0W7 228 aa11.06□□□□□ -0.64
SEMA4B-204ENST00000558065 TLK1Q9UKI8 766 aa11.06□□□□□ -0.64
SEMA4B-204ENST00000558065 SPATA31D1Q6ZQQ2 1576 aa11.06□□□□□ -0.64
SEMA4B-204ENST00000558065 PIK3C2BO00750 1634 aa11.06□□□□□ -0.64
SEMA4B-204ENST00000558065 STX16-NPEPL1H3BU86 382 aa11.05□□□□□ -0.64
SEMA4B-204ENST00000558065 KRT18P05783 430 aaKnown RBP11.05□□□□□ -0.64
SEMA4B-204ENST00000558065 YBX3P16989 372 aaKnown RBP eCLIP11.05□□□□□ -0.643e-6■■□□□ 12.9
SEMA4B-204ENST00000558065 GTF2E2P29084 291 aaKnown RBP11.05□□□□□ -0.64
SEMA4B-204ENST00000558065 CSKP41240 450 aa11.05□□□□□ -0.64
SEMA4B-204ENST00000558065 MFAP3P55082 362 aa11.05□□□□□ -0.64
SEMA4B-204ENST00000558065 CSNK2BP67870 215 aa11.05□□□□□ -0.64
SEMA4B-204ENST00000558065 SEMA3BQ13214 749 aa11.05□□□□□ -0.64
SEMA4B-204ENST00000558065 MFSD10Q14728 455 aa11.05□□□□□ -0.64
SEMA4B-204ENST00000558065 GPAT3Q53EU6 434 aa11.05□□□□□ -0.64
SEMA4B-204ENST00000558065 TXNDC11Q6PKC3 985 aa11.05□□□□□ -0.64
SEMA4B-204ENST00000558065 ZBTB49Q6ZSB9 765 aa11.05□□□□□ -0.64
SEMA4B-204ENST00000558065 CDHR3Q6ZTQ4 885 aa11.05□□□□□ -0.64
SEMA4B-204ENST00000558065 MAVSQ7Z434 540 aa11.05□□□□□ -0.64
SEMA4B-204ENST00000558065 SVOPQ8N4V2 548 aa11.05□□□□□ -0.64
SEMA4B-204ENST00000558065 SLC7A6Q92536 515 aa11.05□□□□□ -0.64
SEMA4B-204ENST00000558065 SERAC1Q96JX3 654 aa11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms