RNA–Protein interactions for RNA: ENST00000557884.5

USP3-205, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 3

Gene USP3, Length 958 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-205ENST00000557884 KIF19Q2TAC6 998 aa14.38□□□□□ -0.11
USP3-205ENST00000557884 FAXCQ5TGI0 409 aa14.38□□□□□ -0.11
USP3-205ENST00000557884 ZSCAN30Q86W11 494 aa14.38□□□□□ -0.11
USP3-205ENST00000557884 SLC25A41Q8N5S1 370 aa14.38□□□□□ -0.11
USP3-205ENST00000557884 PRELID2Q8N945 189 aa14.38□□□□□ -0.11
USP3-205ENST00000557884 TMEM145Q8NBT3 493 aa14.38□□□□□ -0.11
USP3-205ENST00000557884 OR2I1PQ8NGU4 316 aa14.38□□□□□ -0.11
USP3-205ENST00000557884 SCRN2Q96FV2 425 aa14.38□□□□□ -0.11
USP3-205ENST00000557884 MRGPRX2Q96LB1 330 aa14.38□□□□□ -0.11
USP3-205ENST00000557884 MLPHQ9BV36 600 aaPredicted RBP14.38□□□□□ -0.11
USP3-205ENST00000557884 EDEM2Q9BV94 578 aa14.38□□□□□ -0.11
USP3-205ENST00000557884 FICDQ9BVA6 458 aa14.38□□□□□ -0.11
USP3-205ENST00000557884 RPL26L1Q9UNX3 145 aaKnown RBP14.38□□□□□ -0.11
USP3-205ENST00000557884 ANKRD6Q9Y2G4 727 aa14.38□□□□□ -0.11
USP3-205ENST00000557884 PPIL1Q9Y3C6 166 aa14.38□□□□□ -0.11
USP3-205ENST00000557884 PTPRZ1P23471 2315 aaPredicted RBP14.38□□□□□ -0.11
USP3-205ENST00000557884 CTAGE9A4FU28 777 aa14.37□□□□□ -0.11
USP3-205ENST00000557884 CAPN8A6NHC0 703 aa14.37□□□□□ -0.11
USP3-205ENST00000557884 ANKRD66B4E2M5 251 aa14.37□□□□□ -0.11
USP3-205ENST00000557884 ARHGAP33O14559 1287 aa14.37□□□□□ -0.11
USP3-205ENST00000557884 FANCGO15287 622 aa14.37□□□□□ -0.11
USP3-205ENST00000557884 GCATO75600 419 aa14.37□□□□□ -0.11
USP3-205ENST00000557884 RECQL5O94762 991 aaPredicted RBP14.37□□□□□ -0.11
USP3-205ENST00000557884 METTL18O95568 372 aa14.37□□□□□ -0.11
USP3-205ENST00000557884 NDST3O95803 873 aa14.37□□□□□ -0.11
USP3-205ENST00000557884 SLC4A1P02730 911 aa14.37□□□□□ -0.11
USP3-205ENST00000557884 CHRNA4P43681 627 aa14.37□□□□□ -0.11
USP3-205ENST00000557884 TNNT3P45378 269 aaPredicted RBP14.37□□□□□ -0.11
USP3-205ENST00000557884 ATXN3P54252 364 aaPredicted RBP14.37□□□□□ -0.11
USP3-205ENST00000557884 GEMP55040 296 aa14.37□□□□□ -0.11
USP3-205ENST00000557884 MPP3Q13368 585 aa14.37□□□□□ -0.11
USP3-205ENST00000557884 ARHGEF7Q14155 803 aa14.37□□□□□ -0.11
USP3-205ENST00000557884 PRPSAP1Q14558 356 aa14.37□□□□□ -0.11
USP3-205ENST00000557884 IRF4Q15306 451 aa14.37□□□□□ -0.11
USP3-205ENST00000557884 LRRC66Q68CR7 880 aa14.37□□□□□ -0.11
USP3-205ENST00000557884 CRTC1Q6UUV9 634 aa14.37□□□□□ -0.11
USP3-205ENST00000557884 GCNT7Q6ZNI0 430 aa14.37□□□□□ -0.11
USP3-205ENST00000557884 HSD11B1LQ7Z5J1 315 aa14.37□□□□□ -0.11
USP3-205ENST00000557884 PTAR1Q7Z6K3 402 aaPredicted RBP14.37□□□□□ -0.11
USP3-205ENST00000557884 GPR161Q8N6U8 529 aaKnown RBP14.37□□□□□ -0.11
USP3-205ENST00000557884 CAPZA3Q96KX2 299 aa14.37□□□□□ -0.11
USP3-205ENST00000557884 KLF6Q99612 283 aaPredicted RBP14.37□□□□□ -0.11
USP3-205ENST00000557884 C1QTNF7Q9BXJ2 289 aa14.37□□□□□ -0.11
USP3-205ENST00000557884 MBNL1Q9NR56 388 aaKnown RBP14.37□□□□□ -0.11
USP3-205ENST00000557884 TTC7AQ9ULT0 858 aaPredicted RBP14.37□□□□□ -0.11
USP3-205ENST00000557884 ZKSCAN5Q9Y2L8 839 aa14.37□□□□□ -0.11
USP3-205ENST00000557884 SNX11Q9Y5W9 270 aa14.37□□□□□ -0.11
USP3-205ENST00000557884 C1orf232A0A0U1RR37 186 aa14.36□□□□□ -0.11
USP3-205ENST00000557884 LOC105378220A0A1B0GUY1 285 aaPredicted RBP14.36□□□□□ -0.11
USP3-205ENST00000557884 POM121BA6NF01 834 aa14.36□□□□□ -0.11
USP3-205ENST00000557884 TLR4O00206 839 aa14.36□□□□□ -0.11
USP3-205ENST00000557884 FPGTO14772 594 aa14.36□□□□□ -0.11
USP3-205ENST00000557884 VILLO15195 856 aa14.36□□□□□ -0.11
USP3-205ENST00000557884 ANXA9O76027 345 aa14.36□□□□□ -0.11
USP3-205ENST00000557884 CLDN7O95471 211 aa14.36□□□□□ -0.11
USP3-205ENST00000557884 AGTP01019 485 aa14.36□□□□□ -0.11
USP3-205ENST00000557884 PCCBP05166 539 aa14.36□□□□□ -0.11
USP3-205ENST00000557884 ITGAVP06756 1048 aa14.36□□□□□ -0.11
USP3-205ENST00000557884 SYPP08247 313 aa14.36□□□□□ -0.11
USP3-205ENST00000557884 ATXN1LP0C7T5 689 aaKnown RBP14.36□□□□□ -0.11
USP3-205ENST00000557884 ZSCAN5DPP0CG00 497 aa14.36□□□□□ -0.11
USP3-205ENST00000557884 THEGLP0DJG4 465 aa14.36□□□□□ -0.11
USP3-205ENST00000557884 GM2AP17900 193 aa14.36□□□□□ -0.11
USP3-205ENST00000557884 TCP1P17987 556 aaKnown RBP14.36□□□□□ -0.11
USP3-205ENST00000557884 STIP1P31948 543 aaKnown RBP14.36□□□□□ -0.11
USP3-205ENST00000557884 IGFALSP35858 605 aa14.36□□□□□ -0.11
USP3-205ENST00000557884 ETV3P41162 512 aa14.36□□□□□ -0.11
USP3-205ENST00000557884 SPARCL1Q14515 664 aa14.36□□□□□ -0.11
USP3-205ENST00000557884 LRRC14Q15048 493 aa14.36□□□□□ -0.11
USP3-205ENST00000557884 WSCD2Q2TBF2 565 aa14.36□□□□□ -0.11
USP3-205ENST00000557884 SIRPB2Q5JXA9 342 aa14.36□□□□□ -0.11
USP3-205ENST00000557884 PRAMEF14Q5SWL7 426 aa14.36□□□□□ -0.11
USP3-205ENST00000557884 CCDC70Q6NSX1 233 aa14.36□□□□□ -0.11
USP3-205ENST00000557884 RFLNAQ6ZTI6 216 aa14.36□□□□□ -0.11
USP3-205ENST00000557884 GSTA5Q7RTV2 222 aa14.36□□□□□ -0.11
USP3-205ENST00000557884 CCDC89Q8N998 374 aa14.36□□□□□ -0.11
USP3-205ENST00000557884 GLIS1Q8NBF1 620 aa14.36□□□□□ -0.11
USP3-205ENST00000557884 TP53I13Q8NBR0 393 aaPredicted RBP14.36□□□□□ -0.11
USP3-205ENST00000557884 DENND6BQ8NEG7 585 aa14.36□□□□□ -0.11
USP3-205ENST00000557884 OR13H1Q8NG92 308 aa14.36□□□□□ -0.11
USP3-205ENST00000557884 ACTRT1Q8TDG2 376 aa14.36□□□□□ -0.11
USP3-205ENST00000557884 ASB12Q8WXK4 309 aa14.36□□□□□ -0.11
USP3-205ENST00000557884 MAGOHBQ96A72 148 aaKnown RBP14.36□□□□□ -0.11
USP3-205ENST00000557884 CENPTQ96BT3 561 aa14.36□□□□□ -0.11
USP3-205ENST00000557884 TRIM44Q96DX7 344 aaPredicted RBP14.36□□□□□ -0.11
USP3-205ENST00000557884 RTP4Q96DX8 246 aa14.36□□□□□ -0.11
USP3-205ENST00000557884 BMFQ96LC9 184 aa14.36□□□□□ -0.11
USP3-205ENST00000557884 COQ10AQ96MF6 247 aa14.36□□□□□ -0.11
USP3-205ENST00000557884 LENG8Q96PV6 779 aaPredicted RBP14.36□□□□□ -0.11
USP3-205ENST00000557884 NAP1L3Q99457 506 aaPredicted RBP14.36□□□□□ -0.11
USP3-205ENST00000557884 APOL2Q9BQE5 337 aa14.36□□□□□ -0.11
USP3-205ENST00000557884 FSD1LQ9BXM9 530 aa14.36□□□□□ -0.11
USP3-205ENST00000557884 SHOC2Q9UQ13 582 aa14.36□□□□□ -0.11
USP3-205ENST00000557884 LOC285095A0A1B0GVY8 99 aa14.35□□□□□ -0.11
USP3-205ENST00000557884 A6NNZ2 444 aa14.35□□□□□ -0.11
USP3-205ENST00000557884 CES2O00748 559 aa14.35□□□□□ -0.11
USP3-205ENST00000557884 USP12O75317 370 aa14.35□□□□□ -0.11
USP3-205ENST00000557884 C1SP09871 688 aa14.35□□□□□ -0.11
USP3-205ENST00000557884 CTSKP43235 329 aa14.35□□□□□ -0.11
USP3-205ENST00000557884 STC1P52823 247 aa14.35□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms