RNA–Protein interactions for RNA: ENST00000557782.1

TDP1-217, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 318 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-217ENST00000557782 INTS14Q96SY0 518 aa3.87□□□□□ -1.79
TDP1-217ENST00000557782 CDRT15Q96T59 188 aa3.87□□□□□ -1.79
TDP1-217ENST00000557782 TMEM47Q9BQJ4 181 aa3.87□□□□□ -1.79
TDP1-217ENST00000557782 TEX101Q9BY14 249 aa3.87□□□□□ -1.79
TDP1-217ENST00000557782 RTN4RQ9BZR6 473 aa3.87□□□□□ -1.79
TDP1-217ENST00000557782 GPR88Q9GZN0 384 aa3.87□□□□□ -1.79
TDP1-217ENST00000557782 MAGEE1Q9HCI5 957 aa3.87□□□□□ -1.79
TDP1-217ENST00000557782 BPIFA1Q9NP55 256 aa3.87□□□□□ -1.79
TDP1-217ENST00000557782 KLC4Q9NSK0 619 aa3.87□□□□□ -1.79
TDP1-217ENST00000557782 OLAHQ9NV23 265 aa3.87□□□□□ -1.79
TDP1-217ENST00000557782 MTPAPQ9NVV4 582 aaKnown RBP eCLIP3.87□□□□□ -1.79
TDP1-217ENST00000557782 COPG2Q9UBF2 871 aa3.87□□□□□ -1.79
TDP1-217ENST00000557782 CNOT6Q9ULM6 557 aaKnown RBP3.87□□□□□ -1.79
TDP1-217ENST00000557782 TNFSF13BQ9Y275 285 aa3.87□□□□□ -1.79
TDP1-217ENST00000557782 MAP3K2Q9Y2U5 619 aa3.87□□□□□ -1.79
TDP1-217ENST00000557782 HEMK1Q9Y5R4 338 aaPredicted RBP3.87□□□□□ -1.79
TDP1-217ENST00000557782 ADGRA2Q96PE1 1338 aa3.87□□□□□ -1.79
TDP1-217ENST00000557782 A0A087WV48 116 aa3.86□□□□□ -1.79
TDP1-217ENST00000557782 LOC105378220A0A1B0GUY1 285 aaPredicted RBP3.86□□□□□ -1.79
TDP1-217ENST00000557782 A0A1W2PR77 199 aa3.86□□□□□ -1.79
TDP1-217ENST00000557782 SYCE3A1L190 88 aa3.86□□□□□ -1.79
TDP1-217ENST00000557782 TARSL2A2RTX5 802 aaKnown RBP3.86□□□□□ -1.79
TDP1-217ENST00000557782 MARCH11A6NNE9 402 aa3.86□□□□□ -1.79
TDP1-217ENST00000557782 MAGEB17A8MXT2 336 aa3.86□□□□□ -1.79
TDP1-217ENST00000557782 IFNL4K9M1U5 179 aa3.86□□□□□ -1.79
TDP1-217ENST00000557782 SPRY1O43609 319 aaPredicted RBP3.86□□□□□ -1.79
TDP1-217ENST00000557782 PLRG1O43660 514 aaKnown RBP3.86□□□□□ -1.79
TDP1-217ENST00000557782 NOL3O60936 208 aaKnown RBP3.86□□□□□ -1.79
TDP1-217ENST00000557782 DDHD2O94830 711 aa3.86□□□□□ -1.79
TDP1-217ENST00000557782 GBAP04062 536 aa3.86□□□□□ -1.79
TDP1-217ENST00000557782 ZFYP08048 801 aaPredicted RBP3.86□□□□□ -1.79
TDP1-217ENST00000557782 INHBAP08476 426 aa3.86□□□□□ -1.79
TDP1-217ENST00000557782 NPSP0C0P6 89 aa3.86□□□□□ -1.79
TDP1-217ENST00000557782 RFPL3SP0C7P2 107 aa3.86□□□□□ -1.79
TDP1-217ENST00000557782 VPREB1P12018 145 aa3.86□□□□□ -1.79
TDP1-217ENST00000557782 ITGAXP20702 1163 aa3.86□□□□□ -1.79
TDP1-217ENST00000557782 GPTP24298 496 aa3.86□□□□□ -1.79
TDP1-217ENST00000557782 KLRC2P26717 231 aa3.86□□□□□ -1.79
TDP1-217ENST00000557782 EPHB2P29323 1055 aa3.86□□□□□ -1.79
TDP1-217ENST00000557782 PCGF2P35227 344 aa3.86□□□□□ -1.79
TDP1-217ENST00000557782 GPC3P51654 580 aa3.86□□□□□ -1.79
TDP1-217ENST00000557782 EPHB4P54760 987 aa3.86□□□□□ -1.79
TDP1-217ENST00000557782 CLDN2P57739 230 aa3.86□□□□□ -1.79
TDP1-217ENST00000557782 ZBTB16Q05516 673 aa3.86□□□□□ -1.79
TDP1-217ENST00000557782 MFSD13AQ14CX5 517 aa3.86□□□□□ -1.79
TDP1-217ENST00000557782 RRS1Q15050 365 aaKnown RBP3.86□□□□□ -1.79
TDP1-217ENST00000557782 USP41Q3LFD5 358 aa3.86□□□□□ -1.79
TDP1-217ENST00000557782 ANXA2RQ3ZCQ2 193 aa3.86□□□□□ -1.79
TDP1-217ENST00000557782 FUT11Q495W5 492 aa3.86□□□□□ -1.79
TDP1-217ENST00000557782 HSP90AA5PQ58FG0 334 aa3.86□□□□□ -1.79
TDP1-217ENST00000557782 PLAC9Q5JTB6 97 aa3.86□□□□□ -1.79
TDP1-217ENST00000557782 C10orf76Q5T2E6 689 aa3.86□□□□□ -1.79
TDP1-217ENST00000557782 VWA5B1Q5TIE3 1220 aa3.86□□□□□ -1.79
TDP1-217ENST00000557782 DPY19L2P1Q6NXN4 242 aa3.86□□□□□ -1.79
TDP1-217ENST00000557782 TMEM270Q6UE05 265 aa3.86□□□□□ -1.79
TDP1-217ENST00000557782 LCTLQ6UWM7 567 aa3.86□□□□□ -1.79
TDP1-217ENST00000557782 C11orf57Q6ZUT1 292 aaPredicted RBP3.86□□□□□ -1.79
TDP1-217ENST00000557782 RPAINQ86UA6 219 aa3.86□□□□□ -1.79
TDP1-217ENST00000557782 DZIP1Q86YF9 867 aaKnown RBP3.86□□□□□ -1.79
TDP1-217ENST00000557782 TIGD4Q8IY51 512 aa3.86□□□□□ -1.79
TDP1-217ENST00000557782 TMEM151AQ8N4L1 468 aa3.86□□□□□ -1.79
TDP1-217ENST00000557782 NHLRC2Q8NBF2 726 aa3.86□□□□□ -1.79
TDP1-217ENST00000557782 CFAP61Q8NHU2 1237 aa3.86□□□□□ -1.79
TDP1-217ENST00000557782 FEZF2Q8TBJ5 459 aa3.86□□□□□ -1.79
TDP1-217ENST00000557782 FAR1Q8WVX9 515 aa3.86□□□□□ -1.79
TDP1-217ENST00000557782 ZC3HAV1LQ96H79 300 aaKnown RBP3.86□□□□□ -1.79
TDP1-217ENST00000557782 ZNF558Q96NG5 402 aa3.86□□□□□ -1.79
TDP1-217ENST00000557782 PRAM1Q96QH2 718 aa3.86□□□□□ -1.79
TDP1-217ENST00000557782 KRT23Q9C075 422 aa3.86□□□□□ -1.79
TDP1-217ENST00000557782 SPATC1LQ9H0A9 340 aa3.86□□□□□ -1.79
TDP1-217ENST00000557782 GOLPH3LQ9H4A5 285 aa3.86□□□□□ -1.79
TDP1-217ENST00000557782 ANKZF1Q9H8Y5 726 aa3.86□□□□□ -1.79
TDP1-217ENST00000557782 CNOT10Q9H9A5 744 aaKnown RBP3.86□□□□□ -1.79
TDP1-217ENST00000557782 PAPOLBQ9NRJ5 636 aaKnown RBP3.86□□□□□ -1.79
TDP1-217ENST00000557782 PAG1Q9NWQ8 432 aa3.86□□□□□ -1.79
TDP1-217ENST00000557782 SEPT10Q9P0V9 454 aa3.86□□□□□ -1.79
TDP1-217ENST00000557782 ACTR3BQ9P1U1 418 aa3.86□□□□□ -1.79
TDP1-217ENST00000557782 DKK3Q9UBP4 350 aa3.86□□□□□ -1.79
TDP1-217ENST00000557782 FBXW11Q9UKB1 542 aa3.86□□□□□ -1.79
TDP1-217ENST00000557782 WBP11Q9Y2W2 641 aaKnown RBP3.86□□□□□ -1.79
TDP1-217ENST00000557782 NFS1Q9Y697 457 aa3.86□□□□□ -1.79
TDP1-217ENST00000557782 AP1M2Q9Y6Q5 423 aa3.86□□□□□ -1.79
TDP1-217ENST00000557782 SYNJ2BP-COX16A0A087WUM0 186 aa3.85□□□□□ -1.79
TDP1-217ENST00000557782 C11orf97A0A1B0GVM6 126 aaPredicted RBP3.85□□□□□ -1.79
TDP1-217ENST00000557782 TYW5A2RUC4 315 aaKnown RBP3.85□□□□□ -1.79
TDP1-217ENST00000557782 H3BQ06 376 aaPredicted RBP3.85□□□□□ -1.79
TDP1-217ENST00000557782 EBAG9O00559 213 aa3.85□□□□□ -1.79
TDP1-217ENST00000557782 TLR2O60603 784 aa3.85□□□□□ -1.79
TDP1-217ENST00000557782 SOCS5O75159 536 aa3.85□□□□□ -1.79
TDP1-217ENST00000557782 BCAS2O75934 225 aaPredicted RBP3.85□□□□□ -1.79
TDP1-217ENST00000557782 NCR1O76036 304 aa3.85□□□□□ -1.79
TDP1-217ENST00000557782 CELF2O95319 508 aaKnown RBP3.85□□□□□ -1.79
TDP1-217ENST00000557782 CHRM2P08172 466 aa3.85□□□□□ -1.79
TDP1-217ENST00000557782 VIMP08670 466 aaKnown RBP3.85□□□□□ -1.79
TDP1-217ENST00000557782 UROSP10746 265 aa3.85□□□□□ -1.79
TDP1-217ENST00000557782 AKR1A1P14550 325 aa3.85□□□□□ -1.79
TDP1-217ENST00000557782 ENGP17813 658 aa3.85□□□□□ -1.79
TDP1-217ENST00000557782 PRCPP42785 496 aa3.85□□□□□ -1.79
TDP1-217ENST00000557782 KHKP50053 298 aa3.85□□□□□ -1.79
TDP1-217ENST00000557782 ZNF81P51508 661 aa3.85□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms