RNA–Protein interactions for RNA: ENST00000557749.5

LINC00648-204, long intergenic non-protein coding RNA 648, humanhuman

TSL 5 BASIC

Gene LINC00648, Length 443 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00648-204ENST00000557749 NPWQ8N729 165 aa11.49□□□□□ -0.57
LINC00648-204ENST00000557749 FAM181AQ8N9Y4 354 aa11.49□□□□□ -0.57
LINC00648-204ENST00000557749 TSEN2Q8NCE0 465 aaKnown RBP11.49□□□□□ -0.57
LINC00648-204ENST00000557749 SCG3Q8WXD2 468 aaKnown RBP11.49□□□□□ -0.57
LINC00648-204ENST00000557749 ZCCHC14Q8WYQ9 949 aaKnown RBP11.49□□□□□ -0.57
LINC00648-204ENST00000557749 ECHDC3Q96DC8 303 aa11.49□□□□□ -0.57
LINC00648-204ENST00000557749 BMFQ96LC9 184 aa11.49□□□□□ -0.57
LINC00648-204ENST00000557749 NUDCD1Q96RS6 583 aa11.49□□□□□ -0.57
LINC00648-204ENST00000557749 SLC13A1Q9BZW2 595 aa11.49□□□□□ -0.57
LINC00648-204ENST00000557749 FZD3Q9NPG1 666 aa11.49□□□□□ -0.57
LINC00648-204ENST00000557749 NENFQ9UMX5 172 aa11.49□□□□□ -0.57
LINC00648-204ENST00000557749 CACNA1BQ00975 2339 aa11.49□□□□□ -0.57
LINC00648-204ENST00000557749 CHD8Q9HCK8 2581 aa11.49□□□□□ -0.57
LINC00648-204ENST00000557749 EPG5Q9HCE0 2579 aa11.48□□□□□ -0.57
LINC00648-204ENST00000557749 CEP295Q9C0D2 2601 aa11.48□□□□□ -0.57
LINC00648-204ENST00000557749 A6NJY4 79 aa11.48□□□□□ -0.57
LINC00648-204ENST00000557749 SCAMP1O15126 338 aa11.48□□□□□ -0.57
LINC00648-204ENST00000557749 MMP20O60882 483 aa11.48□□□□□ -0.57
LINC00648-204ENST00000557749 IPO7O95373 1038 aaKnown RBP11.48□□□□□ -0.57
LINC00648-204ENST00000557749 PIGNO95427 931 aa11.48□□□□□ -0.57
LINC00648-204ENST00000557749 ELFN1P0C7U0 828 aa11.48□□□□□ -0.57
LINC00648-204ENST00000557749 CYP2A6P11509 494 aaPredicted RBP11.48□□□□□ -0.57
LINC00648-204ENST00000557749 ZFXP17010 805 aaPredicted RBP11.48□□□□□ -0.57
LINC00648-204ENST00000557749 AMPD1P23109 780 aa11.48□□□□□ -0.57
LINC00648-204ENST00000557749 MMP12P39900 470 aa11.48□□□□□ -0.57
LINC00648-204ENST00000557749 ACADVLP49748 655 aa11.48□□□□□ -0.57
LINC00648-204ENST00000557749 CLDN2P57739 230 aa11.48□□□□□ -0.57
LINC00648-204ENST00000557749 MTM1Q13496 603 aa11.48□□□□□ -0.57
LINC00648-204ENST00000557749 IFI16Q16666 785 aaKnown RBP11.48□□□□□ -0.57
LINC00648-204ENST00000557749 C4orf17Q53FE4 359 aa11.48□□□□□ -0.57
LINC00648-204ENST00000557749 PRAMEF14Q5SWL7 426 aa11.48□□□□□ -0.57
LINC00648-204ENST00000557749 LRRC38Q5VT99 294 aa11.48□□□□□ -0.57
LINC00648-204ENST00000557749 USP45Q70EL2 814 aa11.48□□□□□ -0.57
LINC00648-204ENST00000557749 BZW1Q7L1Q6 419 aaKnown RBP11.48□□□□□ -0.57
LINC00648-204ENST00000557749 KANSL1Q7Z3B3 1105 aa11.48□□□□□ -0.57
LINC00648-204ENST00000557749 ANKMY2Q8IV38 441 aa11.48□□□□□ -0.57
LINC00648-204ENST00000557749 SLC22A18ASQ8N1D0 253 aa11.48□□□□□ -0.57
LINC00648-204ENST00000557749 PNPLA1Q8N8W4 532 aa11.48□□□□□ -0.57
LINC00648-204ENST00000557749 WDR48Q8TAF3 677 aa11.48□□□□□ -0.57
LINC00648-204ENST00000557749 TRAF3IP1Q8TDR0 691 aaPredicted RBP11.48□□□□□ -0.57
LINC00648-204ENST00000557749 RFFLQ8WZ73 363 aa11.48□□□□□ -0.57
LINC00648-204ENST00000557749 CENPTQ96BT3 561 aa11.48□□□□□ -0.57
LINC00648-204ENST00000557749 NXPE2Q96DL1 559 aa11.48□□□□□ -0.57
LINC00648-204ENST00000557749 KLF6Q99612 283 aaPredicted RBP11.48□□□□□ -0.57
LINC00648-204ENST00000557749 MGME1Q9BQP7 344 aa11.48□□□□□ -0.57
LINC00648-204ENST00000557749 WRAP53Q9BUR4 548 aaKnown RBP11.48□□□□□ -0.57
LINC00648-204ENST00000557749 TRIM5Q9C035 493 aa11.48□□□□□ -0.57
LINC00648-204ENST00000557749 POLR1EQ9GZS1 481 aaKnown RBP11.48□□□□□ -0.57
LINC00648-204ENST00000557749 CCDC86Q9H6F5 360 aaKnown RBP11.48□□□□□ -0.57
LINC00648-204ENST00000557749 NHEJ1Q9H9Q4 299 aaPredicted RBP11.48□□□□□ -0.57
LINC00648-204ENST00000557749 PCDH12Q9NPG4 1184 aa11.48□□□□□ -0.57
LINC00648-204ENST00000557749 DKK4Q9UBT3 224 aa11.48□□□□□ -0.57
LINC00648-204ENST00000557749 POM121BA6NF01 834 aa11.47□□□□□ -0.57
LINC00648-204ENST00000557749 C1QTNF9BB2RNN3 333 aa11.47□□□□□ -0.57
LINC00648-204ENST00000557749 PSMD11O00231 422 aa11.47□□□□□ -0.57
LINC00648-204ENST00000557749 CACNB4O00305 520 aaPredicted RBP11.47□□□□□ -0.57
LINC00648-204ENST00000557749 CDK2AP1O14519 115 aa11.47□□□□□ -0.57
LINC00648-204ENST00000557749 INSIG1O15503 277 aa11.47□□□□□ -0.57
LINC00648-204ENST00000557749 MAFKO60675 156 aa11.47□□□□□ -0.57
LINC00648-204ENST00000557749 MTA2O94776 668 aa11.47□□□□□ -0.57
LINC00648-204ENST00000557749 PYGLP06737 847 aa11.47□□□□□ -0.57
LINC00648-204ENST00000557749 ALPIP09923 528 aa11.47□□□□□ -0.57
LINC00648-204ENST00000557749 C1QTNF9P0C862 333 aa11.47□□□□□ -0.57
LINC00648-204ENST00000557749 CKMT1AP12532 417 aa11.47□□□□□ -0.57
LINC00648-204ENST00000557749 C6P13671 934 aa11.47□□□□□ -0.57
LINC00648-204ENST00000557749 JUPP14923 745 aa11.47□□□□□ -0.57
LINC00648-204ENST00000557749 SPINK2P20155 84 aa11.47□□□□□ -0.57
LINC00648-204ENST00000557749 GARSP41250 739 aaKnown RBP11.47□□□□□ -0.57
LINC00648-204ENST00000557749 LIG3P49916 1009 aa11.47□□□□□ -0.57
LINC00648-204ENST00000557749 PPARDQ03181 441 aa11.47□□□□□ -0.57
LINC00648-204ENST00000557749 SLC10A7Q0GE19 358 aa11.47□□□□□ -0.57
LINC00648-204ENST00000557749 GALNT2Q10471 571 aa11.47□□□□□ -0.57
LINC00648-204ENST00000557749 BNIP3Q12983 259 aa11.47□□□□□ -0.57
LINC00648-204ENST00000557749 PEX6Q13608 980 aa11.47□□□□□ -0.57
LINC00648-204ENST00000557749 DPYSL3Q14195 570 aa11.47□□□□□ -0.57
LINC00648-204ENST00000557749 FGL2Q14314 439 aa11.47□□□□□ -0.57
LINC00648-204ENST00000557749 FZD2Q14332 565 aa11.47□□□□□ -0.57
LINC00648-204ENST00000557749 PAFAH1B3Q15102 231 aaKnown RBP11.47□□□□□ -0.57
LINC00648-204ENST00000557749 ELOCQ15369 112 aa11.47□□□□□ -0.57
LINC00648-204ENST00000557749 ASTE1Q2TB18 679 aaPredicted RBP11.47□□□□□ -0.57
LINC00648-204ENST00000557749 CCDC157Q569K6 752 aa11.47□□□□□ -0.57
LINC00648-204ENST00000557749 LVRNQ6Q4G3 990 aa11.47□□□□□ -0.57
LINC00648-204ENST00000557749 DPPA4Q7L190 304 aa11.47□□□□□ -0.57
LINC00648-204ENST00000557749 CAMK1DQ8IU85 385 aa11.47□□□□□ -0.57
LINC00648-204ENST00000557749 RAVER1Q8IY67 606 aaKnown RBP11.47□□□□□ -0.57
LINC00648-204ENST00000557749 RNF214Q8ND24 703 aa11.47□□□□□ -0.57
LINC00648-204ENST00000557749 ZNF548Q8NEK5 533 aaPredicted RBP11.47□□□□□ -0.57
LINC00648-204ENST00000557749 NAT6Q93015 286 aa11.47□□□□□ -0.57
LINC00648-204ENST00000557749 GRAMD1AQ96CP6 724 aa11.47□□□□□ -0.57
LINC00648-204ENST00000557749 IL12RB2Q99665 862 aa11.47□□□□□ -0.57
LINC00648-204ENST00000557749 MAK16Q9BXY0 300 aaKnown RBP11.47□□□□□ -0.57
LINC00648-204ENST00000557749 BRD8Q9H0E9 1235 aa11.47□□□□□ -0.57
LINC00648-204ENST00000557749 DDX56Q9NY93 547 aaKnown RBP11.47□□□□□ -0.57
LINC00648-204ENST00000557749 SCHIP1Q9P0W5 487 aaPredicted RBP11.47□□□□□ -0.57
LINC00648-204ENST00000557749 APOBEC3BQ9UH17 382 aaKnown RBP11.47□□□□□ -0.57
LINC00648-204ENST00000557749 SALL4Q9UJQ4 1053 aa11.47□□□□□ -0.57
LINC00648-204ENST00000557749 PHTF1Q9UMS5 762 aa11.47□□□□□ -0.57
LINC00648-204ENST00000557749 ITM2BQ9Y287 266 aa11.47□□□□□ -0.57
LINC00648-204ENST00000557749 CA5BQ9Y2D0 317 aa11.47□□□□□ -0.57
LINC00648-204ENST00000557749 MAP1BP46821 2468 aaKnown RBP11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms