RNA–Protein interactions for RNA: ENST00000557623.5

SLIRP-211, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2 BASIC

Gene SLIRP, Length 865 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-211ENST00000557623 SAE1Q9UBE0 346 aaPredicted RBP12.55□□□□□ -0.4
SLIRP-211ENST00000557623 DNPEPQ9ULA0 475 aa12.55□□□□□ -0.4
SLIRP-211ENST00000557623 GUCA1BQ9UMX6 200 aa12.55□□□□□ -0.4
SLIRP-211ENST00000557623 RPL26L1Q9UNX3 145 aaKnown RBP12.55□□□□□ -0.4
SLIRP-211ENST00000557623 PPIL1Q9Y3C6 166 aa12.55□□□□□ -0.4
SLIRP-211ENST00000557623 COL5A1P20908 1838 aaPredicted RBP12.54□□□□□ -0.4
SLIRP-211ENST00000557623 POM121BA6NF01 834 aa12.54□□□□□ -0.4
SLIRP-211ENST00000557623 PCNX2A6NKB5 2137 aa12.54□□□□□ -0.4
SLIRP-211ENST00000557623 SH3BP5O60239 455 aa12.54□□□□□ -0.4
SLIRP-211ENST00000557623 FZD6O60353 706 aa12.54□□□□□ -0.4
SLIRP-211ENST00000557623 ZNF189O75820 626 aaPredicted RBP12.54□□□□□ -0.4
SLIRP-211ENST00000557623 FTCDO95954 541 aa12.54□□□□□ -0.4
SLIRP-211ENST00000557623 PRKCGP05129 697 aa12.54□□□□□ -0.4
SLIRP-211ENST00000557623 PTMAP06454 111 aaKnown RBP12.54□□□□□ -0.4
SLIRP-211ENST00000557623 ITGAVP06756 1048 aa12.54□□□□□ -0.4
SLIRP-211ENST00000557623 EPHB1P54762 984 aa12.54□□□□□ -0.4
SLIRP-211ENST00000557623 YPEL5P62699 121 aa12.54□□□□□ -0.4
SLIRP-211ENST00000557623 CCZ1BP86790 482 aa12.54□□□□□ -0.4
SLIRP-211ENST00000557623 CCZ1P86791 482 aaPredicted RBP12.54□□□□□ -0.4
SLIRP-211ENST00000557623 ADCY2Q08462 1091 aa12.54□□□□□ -0.4
SLIRP-211ENST00000557623 NIPAL4Q0D2K0 466 aa12.54□□□□□ -0.4
SLIRP-211ENST00000557623 RALGDSQ12967 914 aa12.54□□□□□ -0.4
SLIRP-211ENST00000557623 ZBTB17Q13105 803 aa12.54□□□□□ -0.4
SLIRP-211ENST00000557623 ARHGEF7Q14155 803 aa12.54□□□□□ -0.4
SLIRP-211ENST00000557623 PTK2BQ14289 1009 aa12.54□□□□□ -0.4
SLIRP-211ENST00000557623 NOMO1Q15155 1222 aa12.54□□□□□ -0.4
SLIRP-211ENST00000557623 SLC14A2Q15849 920 aa12.54□□□□□ -0.4
SLIRP-211ENST00000557623 PSAPL1Q6NUJ1 521 aa12.54□□□□□ -0.4
SLIRP-211ENST00000557623 LIPIQ6XZB0 460 aa12.54□□□□□ -0.4
SLIRP-211ENST00000557623 ZC3H18Q86VM9 953 aaKnown RBP12.54□□□□□ -0.4
SLIRP-211ENST00000557623 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP12.54□□□□□ -0.4
SLIRP-211ENST00000557623 CNTD1Q8N815 330 aa12.54□□□□□ -0.4
SLIRP-211ENST00000557623 TP53I13Q8NBR0 393 aaPredicted RBP12.54□□□□□ -0.4
SLIRP-211ENST00000557623 SETD7Q8WTS6 366 aaKnown RBP12.54□□□□□ -0.4
SLIRP-211ENST00000557623 PIH1D2Q8WWB5 315 aa12.54□□□□□ -0.4
SLIRP-211ENST00000557623 ALG3Q92685 438 aa12.54□□□□□ -0.4
SLIRP-211ENST00000557623 HES6Q96HZ4 224 aa12.54□□□□□ -0.4
SLIRP-211ENST00000557623 AGAP3Q96P47 875 aa12.54□□□□□ -0.4
SLIRP-211ENST00000557623 ALS2CR12Q96Q35 445 aa12.54□□□□□ -0.4
SLIRP-211ENST00000557623 TDRD1Q9BXT4 1180 aaKnown RBP12.54□□□□□ -0.4
SLIRP-211ENST00000557623 PCDH9Q9HC56 1237 aa12.54□□□□□ -0.4
SLIRP-211ENST00000557623 GPR27Q9NS67 375 aa12.54□□□□□ -0.4
SLIRP-211ENST00000557623 B4GALT6Q9UBX8 382 aa12.54□□□□□ -0.4
SLIRP-211ENST00000557623 COQ6Q9Y2Z9 468 aa12.54□□□□□ -0.4
SLIRP-211ENST00000557623 CAPN6Q9Y6Q1 641 aa12.54□□□□□ -0.4
SLIRP-211ENST00000557623 DMXL1Q9Y485 3027 aa12.54□□□□□ -0.4
SLIRP-211ENST00000557623 LAMA1P25391 3075 aa12.53□□□□□ -0.4
SLIRP-211ENST00000557623 GOLGA6L9A6NEM1 432 aa12.53□□□□□ -0.4
SLIRP-211ENST00000557623 H7C0C1 242 aa12.53□□□□□ -0.4
SLIRP-211ENST00000557623 PSMD11O00231 422 aa12.53□□□□□ -0.4
SLIRP-211ENST00000557623 DDX3YO15523 660 aaKnown RBP12.53□□□□□ -0.4
SLIRP-211ENST00000557623 PYGMP11217 842 aa12.53□□□□□ -0.4
SLIRP-211ENST00000557623 PTPN3P26045 913 aa12.53□□□□□ -0.4
SLIRP-211ENST00000557623 IGFALSP35858 605 aa12.53□□□□□ -0.4
SLIRP-211ENST00000557623 CD86P42081 329 aa12.53□□□□□ -0.4
SLIRP-211ENST00000557623 GRK6P43250 576 aa12.53□□□□□ -0.4
SLIRP-211ENST00000557623 ATP5OP48047 213 aa12.53□□□□□ -0.4
SLIRP-211ENST00000557623 THOP1P52888 689 aa12.53□□□□□ -0.4
SLIRP-211ENST00000557623 PFN3P60673 137 aa12.53□□□□□ -0.4
SLIRP-211ENST00000557623 SKOR1P84550 965 aa12.53□□□□□ -0.4
SLIRP-211ENST00000557623 IL9RQ01113 521 aa12.53□□□□□ -0.4
SLIRP-211ENST00000557623 SEMG2Q02383 582 aa12.53□□□□□ -0.4
SLIRP-211ENST00000557623 IRF4Q15306 451 aa12.53□□□□□ -0.4
SLIRP-211ENST00000557623 PRAMEF14Q5SWL7 426 aa12.53□□□□□ -0.4
SLIRP-211ENST00000557623 SLC22A18ASQ8N1D0 253 aa12.53□□□□□ -0.4
SLIRP-211ENST00000557623 RHBDD1Q8TEB9 315 aa12.53□□□□□ -0.4
SLIRP-211ENST00000557623 HAUS1Q96CS2 278 aa12.53□□□□□ -0.4
SLIRP-211ENST00000557623 IMP4Q96G21 291 aaKnown RBP12.53□□□□□ -0.4
SLIRP-211ENST00000557623 TEKT5Q96M29 485 aa12.53□□□□□ -0.4
SLIRP-211ENST00000557623 QKIQ96PU8 341 aaKnown RBP eCLIP12.53□□□□□ -0.4
SLIRP-211ENST00000557623 MCCC1Q96RQ3 725 aaPredicted RBP12.53□□□□□ -0.4
SLIRP-211ENST00000557623 CDC6Q99741 560 aa12.53□□□□□ -0.4
SLIRP-211ENST00000557623 ADGRE3Q9BY15 652 aa12.53□□□□□ -0.4
SLIRP-211ENST00000557623 SLC25A51Q9H1U9 297 aa12.53□□□□□ -0.4
SLIRP-211ENST00000557623 GLOD4Q9HC38 313 aa12.53□□□□□ -0.4
SLIRP-211ENST00000557623 PACSIN2Q9UNF0 486 aaPredicted RBP12.53□□□□□ -0.4
SLIRP-211ENST00000557623 CHKBQ9Y259 395 aa12.53□□□□□ -0.4
SLIRP-211ENST00000557623 CABIN1Q9Y6J0 2220 aa12.53□□□□□ -0.4
SLIRP-211ENST00000557623 A0A0J9YYE9 177 aa12.52□□□□□ -0.41
SLIRP-211ENST00000557623 SPTY2D1-AS1A0A0U1RR47 76 aa12.52□□□□□ -0.41
SLIRP-211ENST00000557623 A8MX80 341 aa12.52□□□□□ -0.41
SLIRP-211ENST00000557623 H3BM21 787 aa12.52□□□□□ -0.41
SLIRP-211ENST00000557623 RECQL5O94762 991 aaPredicted RBP12.52□□□□□ -0.41
SLIRP-211ENST00000557623 HEXIM1O94992 359 aaKnown RBP12.52□□□□□ -0.41
SLIRP-211ENST00000557623 TRBC1P01850 177 aa12.52□□□□□ -0.41
SLIRP-211ENST00000557623 MMP2P08253 660 aa12.52□□□□□ -0.41
SLIRP-211ENST00000557623 PDHA1P08559 390 aa12.52□□□□□ -0.41
SLIRP-211ENST00000557623 ZNF30P17039 623 aa12.52□□□□□ -0.41
SLIRP-211ENST00000557623 EPHA8P29322 1005 aaPredicted RBP12.52□□□□□ -0.41
SLIRP-211ENST00000557623 OTUD4Q01804 1114 aaKnown RBP12.52□□□□□ -0.41
SLIRP-211ENST00000557623 MTM1Q13496 603 aa12.52□□□□□ -0.41
SLIRP-211ENST00000557623 PDE1CQ14123 709 aaPredicted RBP12.52□□□□□ -0.41
SLIRP-211ENST00000557623 ACOX1Q15067 660 aa12.52□□□□□ -0.41
SLIRP-211ENST00000557623 SHBQ15464 509 aa12.52□□□□□ -0.41
SLIRP-211ENST00000557623 CNGA3Q16281 694 aa12.52□□□□□ -0.41
SLIRP-211ENST00000557623 WSCD2Q2TBF2 565 aa12.52□□□□□ -0.41
SLIRP-211ENST00000557623 B4GALNT4Q76KP1 1039 aa12.52□□□□□ -0.41
SLIRP-211ENST00000557623 PARGQ86W56 976 aa12.52□□□□□ -0.41
SLIRP-211ENST00000557623 CDKL3Q8IVW4 592 aaPredicted RBP12.52□□□□□ -0.41
SLIRP-211ENST00000557623 ATL2Q8NHH9 583 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms