RNA–Protein interactions for RNA: ENST00000557548.1

TRAV28-201, Transcript of T cell receptor alpha variable 28 (pseudogene), humanhuman

BASIC

Gene TRAV28, Length 323 nt, Biotype TR V pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV28-201ENST00000557548 CST9LP1Q5W188 147 aa3.22□□□□□ -1.89
TRAV28-201ENST00000557548 PLBD1Q6P4A8 553 aa3.22□□□□□ -1.89
TRAV28-201ENST00000557548 Q6YL49 198 aa3.22□□□□□ -1.89
TRAV28-201ENST00000557548 GLRX5Q86SX6 157 aa3.22□□□□□ -1.89
TRAV28-201ENST00000557548 SLC35F3Q8IY50 421 aa3.22□□□□□ -1.89
TRAV28-201ENST00000557548 SCYL3Q8IZE3 742 aa3.22□□□□□ -1.89
TRAV28-201ENST00000557548 TC2NQ8N9U0 490 aa3.22□□□□□ -1.89
TRAV28-201ENST00000557548 CMASQ8NFW8 434 aaPredicted RBP3.22□□□□□ -1.89
TRAV28-201ENST00000557548 HUS1BQ8NHY5 278 aa3.22□□□□□ -1.89
TRAV28-201ENST00000557548 TEKT4Q8WW24 435 aa3.22□□□□□ -1.89
TRAV28-201ENST00000557548 LINC00476Q8WZB0 136 aa3.22□□□□□ -1.89
TRAV28-201ENST00000557548 SNX21Q969T3 373 aa3.22□□□□□ -1.89
TRAV28-201ENST00000557548 LRRC59Q96AG4 307 aaKnown RBP3.22□□□□□ -1.89
TRAV28-201ENST00000557548 REPS1Q96D71 796 aa3.22□□□□□ -1.89
TRAV28-201ENST00000557548 RRNAD1Q96FB5 475 aaKnown RBP3.22□□□□□ -1.89
TRAV28-201ENST00000557548 PDLIM2Q96JY6 352 aa3.22□□□□□ -1.89
TRAV28-201ENST00000557548 TMEM47Q9BQJ4 181 aa3.22□□□□□ -1.89
TRAV28-201ENST00000557548 C1QTNF1Q9BXJ1 281 aa3.22□□□□□ -1.89
TRAV28-201ENST00000557548 PFDN4Q9NQP4 134 aa3.22□□□□□ -1.89
TRAV28-201ENST00000557548 SYBUQ9NX95 663 aa3.22□□□□□ -1.89
TRAV28-201ENST00000557548 PSD3Q9NYI0 1048 aa3.22□□□□□ -1.89
TRAV28-201ENST00000557548 COQ3Q9NZJ6 369 aa3.22□□□□□ -1.89
TRAV28-201ENST00000557548 FOXJ2Q9P0K8 574 aa3.22□□□□□ -1.89
TRAV28-201ENST00000557548 FRMD4AQ9P2Q2 1039 aaPredicted RBP3.22□□□□□ -1.89
TRAV28-201ENST00000557548 AMACRQ9UHK6 382 aa3.22□□□□□ -1.89
TRAV28-201ENST00000557548 IPO11Q9UI26 975 aaKnown RBP3.22□□□□□ -1.89
TRAV28-201ENST00000557548 MAFFQ9ULX9 164 aa3.22□□□□□ -1.89
TRAV28-201ENST00000557548 TESMINQ9Y4I5 508 aa3.22□□□□□ -1.89
TRAV28-201ENST00000557548 CEPT1Q9Y6K0 416 aa3.22□□□□□ -1.89
TRAV28-201ENST00000557548 A3GALT2U3KPV4 340 aa3.22□□□□□ -1.89
TRAV28-201ENST00000557548 FNDC1Q4ZHG4 1894 aaPredicted RBP3.22□□□□□ -1.89
TRAV28-201ENST00000557548 A0A096LPK6 155 aa3.21□□□□□ -1.9
TRAV28-201ENST00000557548 GPR75-ASB3A0A0A6YYF3 556 aa3.21□□□□□ -1.9
TRAV28-201ENST00000557548 TRAV34A0A0B4J273 112 aa3.21□□□□□ -1.9
TRAV28-201ENST00000557548 A0A0U1RQF3 1178 aa3.21□□□□□ -1.9
TRAV28-201ENST00000557548 A0A1B0GVM2 712 aa3.21□□□□□ -1.9
TRAV28-201ENST00000557548 LNP1A1A4G5 178 aa3.21□□□□□ -1.9
TRAV28-201ENST00000557548 POC1B-GALNT4F8VUJ3 575 aa3.21□□□□□ -1.9
TRAV28-201ENST00000557548 H0YAE9 185 aa3.21□□□□□ -1.9
TRAV28-201ENST00000557548 UBE2Q2LH0YL09 131 aa3.21□□□□□ -1.9
TRAV28-201ENST00000557548 SMIM22K7EJ46 135 aa3.21□□□□□ -1.9
TRAV28-201ENST00000557548 K7ESM1 405 aa3.21□□□□□ -1.9
TRAV28-201ENST00000557548 PSMA7O14818 248 aa3.21□□□□□ -1.9
TRAV28-201ENST00000557548 MGST3O14880 152 aa3.21□□□□□ -1.9
TRAV28-201ENST00000557548 OGG1O15527 345 aa3.21□□□□□ -1.9
TRAV28-201ENST00000557548 SPRY1O43609 319 aaPredicted RBP3.21□□□□□ -1.9
TRAV28-201ENST00000557548 KLK8O60259 260 aa3.21□□□□□ -1.9
TRAV28-201ENST00000557548 GPC4O75487 556 aa3.21□□□□□ -1.9
TRAV28-201ENST00000557548 GOSR1O95249 250 aa3.21□□□□□ -1.9
TRAV28-201ENST00000557548 BAG2O95816 211 aa3.21□□□□□ -1.9
TRAV28-201ENST00000557548 BCL10O95999 233 aa3.21□□□□□ -1.9
TRAV28-201ENST00000557548 ATP5F1P24539 256 aaPredicted RBP3.21□□□□□ -1.9
TRAV28-201ENST00000557548 PLA2G5P39877 138 aa3.21□□□□□ -1.9
TRAV28-201ENST00000557548 CXCR3P49682 368 aa3.21□□□□□ -1.9
TRAV28-201ENST00000557548 POLGP54098 1239 aaPredicted RBP3.21□□□□□ -1.9
TRAV28-201ENST00000557548 TAS2R40P59535 323 aa3.21□□□□□ -1.9
TRAV28-201ENST00000557548 KRTAP10-7P60409 375 aaPredicted RBP3.21□□□□□ -1.9
TRAV28-201ENST00000557548 PMPCAQ10713 525 aa3.21□□□□□ -1.9
TRAV28-201ENST00000557548 KLF10Q13118 480 aa3.21□□□□□ -1.9
TRAV28-201ENST00000557548 NAE1Q13564 534 aa3.21□□□□□ -1.9
TRAV28-201ENST00000557548 TUBA3CQ13748 450 aa3.21□□□□□ -1.9
TRAV28-201ENST00000557548 PKP1Q13835 747 aa3.21□□□□□ -1.9
TRAV28-201ENST00000557548 CAPSQ13938 189 aa3.21□□□□□ -1.9
TRAV28-201ENST00000557548 SLMAPQ14BN4 828 aa3.21□□□□□ -1.9
TRAV28-201ENST00000557548 TNIP1Q15025 636 aa3.21□□□□□ -1.9
TRAV28-201ENST00000557548 SHBQ15464 509 aa3.21□□□□□ -1.9
TRAV28-201ENST00000557548 ZNF674Q2M3X9 581 aa3.21□□□□□ -1.9
TRAV28-201ENST00000557548 USP41Q3LFD5 358 aa3.21□□□□□ -1.9
TRAV28-201ENST00000557548 SOWAHCQ53LP3 525 aaPredicted RBP3.21□□□□□ -1.9
TRAV28-201ENST00000557548 ESCO2Q56NI9 601 aa3.21□□□□□ -1.9
TRAV28-201ENST00000557548 SGO1Q5FBB7 561 aa3.21□□□□□ -1.9
TRAV28-201ENST00000557548 COLEC12Q5KU26 742 aa3.21□□□□□ -1.9
TRAV28-201ENST00000557548 PRAMEF19Q5SWL8 479 aa3.21□□□□□ -1.9
TRAV28-201ENST00000557548 C6orf141Q5SZD1 244 aa3.21□□□□□ -1.9
TRAV28-201ENST00000557548 AAGABQ6PD74 315 aa3.21□□□□□ -1.9
TRAV28-201ENST00000557548 TUBA3EQ6PEY2 450 aa3.21□□□□□ -1.9
TRAV28-201ENST00000557548 RBPMS2Q6ZRY4 209 aaKnown RBP3.21□□□□□ -1.9
TRAV28-201ENST00000557548 CAMKMTQ7Z624 323 aa3.21□□□□□ -1.9
TRAV28-201ENST00000557548 IGFN1Q86VF2 1251 aa3.21□□□□□ -1.9
TRAV28-201ENST00000557548 RNF168Q8IYW5 571 aaPredicted RBP3.21□□□□□ -1.9
TRAV28-201ENST00000557548 PARP16Q8N5Y8 322 aa3.21□□□□□ -1.9
TRAV28-201ENST00000557548 DPP10Q8N608 796 aa3.21□□□□□ -1.9
TRAV28-201ENST00000557548 ZBTB2Q8N680 514 aa3.21□□□□□ -1.9
TRAV28-201ENST00000557548 TTC9BQ8N6N2 239 aa3.21□□□□□ -1.9
TRAV28-201ENST00000557548 PI4KAP1Q8N8J0 262 aa3.21□□□□□ -1.9
TRAV28-201ENST00000557548 NAT8LQ8N9F0 302 aa3.21□□□□□ -1.9
TRAV28-201ENST00000557548 XXYLT1Q8NBI6 393 aa3.21□□□□□ -1.9
TRAV28-201ENST00000557548 SETD6Q8TBK2 473 aa3.21□□□□□ -1.9
TRAV28-201ENST00000557548 PTPMT1Q8WUK0 201 aaPredicted RBP3.21□□□□□ -1.9
TRAV28-201ENST00000557548 LPGAT1Q92604 370 aa3.21□□□□□ -1.9
TRAV28-201ENST00000557548 FBXL8Q96CD0 374 aa3.21□□□□□ -1.9
TRAV28-201ENST00000557548 RNF183Q96D59 192 aa3.21□□□□□ -1.9
TRAV28-201ENST00000557548 RITA1Q96K30 269 aa3.21□□□□□ -1.9
TRAV28-201ENST00000557548 LINC00615Q96LM1 132 aaPredicted RBP3.21□□□□□ -1.9
TRAV28-201ENST00000557548 CEP295NLQ96MC4 621 aa3.21□□□□□ -1.9
TRAV28-201ENST00000557548 CFAP57Q96MR6 1250 aa3.21□□□□□ -1.9
TRAV28-201ENST00000557548 CDRT15Q96T59 188 aa3.21□□□□□ -1.9
TRAV28-201ENST00000557548 SEPT5Q99719 369 aaPredicted RBP3.21□□□□□ -1.9
TRAV28-201ENST00000557548 CYP4F11Q9HBI6 524 aa3.21□□□□□ -1.9
TRAV28-201ENST00000557548 MOV10Q9HCE1 1003 aaKnown RBP3.21□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms