RNA–Protein interactions for RNA: ENST00000557329.1

CHD8-212, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 2

Gene CHD8, Length 578 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-212ENST00000557329 RPL15P61313 204 aaKnown RBP4.12□□□□□ -1.75
CHD8-212ENST00000557329 AP2B1P63010 937 aa4.12□□□□□ -1.75
CHD8-212ENST00000557329 SF3A3Q12874 501 aaKnown RBP eCLIP4.12□□□□□ -1.755e-6■■□□□ 14.3
CHD8-212ENST00000557329 BTG3Q14201 252 aaPredicted RBP4.12□□□□□ -1.75
CHD8-212ENST00000557329 PFKFB4Q16877 469 aa4.12□□□□□ -1.75
CHD8-212ENST00000557329 TCTN1Q2MV58 587 aa4.12□□□□□ -1.75
CHD8-212ENST00000557329 SYCP2LQ5T4T6 812 aa4.12□□□□□ -1.75
CHD8-212ENST00000557329 VWA5B1Q5TIE3 1220 aa4.12□□□□□ -1.75
CHD8-212ENST00000557329 DAB2IPQ5VWQ8 1189 aa4.12□□□□□ -1.75
CHD8-212ENST00000557329 C1orf228Q6PIY5 440 aa4.12□□□□□ -1.75
CHD8-212ENST00000557329 RFX8Q6ZV50 586 aa4.12□□□□□ -1.75
CHD8-212ENST00000557329 ENAHQ8N8S7 591 aaPredicted RBP4.12□□□□□ -1.75
CHD8-212ENST00000557329 FAM133AQ8N9E0 248 aa4.12□□□□□ -1.75
CHD8-212ENST00000557329 DBF4BQ8NFT6 615 aa4.12□□□□□ -1.75
CHD8-212ENST00000557329 AFAP1L1Q8TED9 768 aa4.12□□□□□ -1.75
CHD8-212ENST00000557329 SDR42E1Q8WUS8 393 aa4.12□□□□□ -1.75
CHD8-212ENST00000557329 HMGB4Q8WW32 186 aa4.12□□□□□ -1.75
CHD8-212ENST00000557329 RUBCNQ92622 972 aa4.12□□□□□ -1.75
CHD8-212ENST00000557329 SECISBP2LQ93073 1101 aaKnown RBP4.12□□□□□ -1.75
CHD8-212ENST00000557329 SDCCAG3Q96C92 435 aa4.12□□□□□ -1.75
CHD8-212ENST00000557329 GPR78Q96P69 363 aa4.12□□□□□ -1.75
CHD8-212ENST00000557329 CRNKL1Q9BZJ0 848 aaKnown RBP4.12□□□□□ -1.75
CHD8-212ENST00000557329 TLE6Q9H808 572 aa4.12□□□□□ -1.75
CHD8-212ENST00000557329 ACAD9Q9H845 621 aa4.12□□□□□ -1.75
CHD8-212ENST00000557329 IGSF9Q9P2J2 1179 aa4.12□□□□□ -1.75
CHD8-212ENST00000557329 CLIP2Q9UDT6 1046 aa4.12□□□□□ -1.75
CHD8-212ENST00000557329 FBXO40Q9UH90 709 aa4.12□□□□□ -1.75
CHD8-212ENST00000557329 SLC12A4Q9UP95 1085 aa4.12□□□□□ -1.75
CHD8-212ENST00000557329 CNTN6Q9UQ52 1028 aa4.12□□□□□ -1.75
CHD8-212ENST00000557329 TRIP12Q14669 1992 aaPredicted RBP4.12□□□□□ -1.75
CHD8-212ENST00000557329 RIF1Q5UIP0 2472 aaKnown RBP4.12□□□□□ -1.75
CHD8-212ENST00000557329 MYH1P12882 1939 aa4.11□□□□□ -1.75
CHD8-212ENST00000557329 MCM3APO60318 1980 aa4.11□□□□□ -1.75
CHD8-212ENST00000557329 FAM186AA6NE01 2351 aa4.11□□□□□ -1.75
CHD8-212ENST00000557329 hCG_1642624A0A1W2PR95 340 aa4.11□□□□□ -1.75
CHD8-212ENST00000557329 RSPH10B2B2RC85 870 aa4.11□□□□□ -1.75
CHD8-212ENST00000557329 KCNJ18B7U540 433 aa4.11□□□□□ -1.75
CHD8-212ENST00000557329 MCIDASD6RGH6 385 aa4.11□□□□□ -1.75
CHD8-212ENST00000557329 F5H6K3 240 aa4.11□□□□□ -1.75
CHD8-212ENST00000557329 ADAM10O14672 748 aa4.11□□□□□ -1.75
CHD8-212ENST00000557329 SPTLC2O15270 562 aa4.11□□□□□ -1.75
CHD8-212ENST00000557329 PI15O43692 258 aa4.11□□□□□ -1.75
CHD8-212ENST00000557329 CCNT1O60563 726 aaKnown RBP4.11□□□□□ -1.75
CHD8-212ENST00000557329 UGDHO60701 494 aa4.11□□□□□ -1.75
CHD8-212ENST00000557329 ACTL6BO94805 426 aa4.11□□□□□ -1.75
CHD8-212ENST00000557329 NFATC1O95644 943 aa4.11□□□□□ -1.75
CHD8-212ENST00000557329 RSPH10BP0C881 870 aa4.11□□□□□ -1.75
CHD8-212ENST00000557329 SNHG28P0DPA3 235 aa4.11□□□□□ -1.75
CHD8-212ENST00000557329 CALML3P27482 149 aa4.11□□□□□ -1.75
CHD8-212ENST00000557329 CIITAP33076 1130 aa4.11□□□□□ -1.75
CHD8-212ENST00000557329 SERPINF1P36955 418 aa4.11□□□□□ -1.75
CHD8-212ENST00000557329 PGGT1BP53609 377 aa4.11□□□□□ -1.75
CHD8-212ENST00000557329 ADPRHP54922 357 aa4.11□□□□□ -1.75
CHD8-212ENST00000557329 KLRC3Q07444 240 aa4.11□□□□□ -1.75
CHD8-212ENST00000557329 PPP2R5BQ15173 497 aa4.11□□□□□ -1.75
CHD8-212ENST00000557329 RPS6KA2Q15349 733 aa4.11□□□□□ -1.75
CHD8-212ENST00000557329 INPP5JQ15735 1006 aaPredicted RBP4.11□□□□□ -1.75
CHD8-212ENST00000557329 MIDNQ504T8 468 aa4.11□□□□□ -1.75
CHD8-212ENST00000557329 AWAT2Q6E213 333 aa4.11□□□□□ -1.75
CHD8-212ENST00000557329 TANGO2Q6ICL3 276 aa4.11□□□□□ -1.75
CHD8-212ENST00000557329 XRRA1Q6P2D8 792 aa4.11□□□□□ -1.75
CHD8-212ENST00000557329 COLCA1Q6ZS62 124 aa4.11□□□□□ -1.75
CHD8-212ENST00000557329 ADGRD2Q7Z7M1 963 aa4.11□□□□□ -1.75
CHD8-212ENST00000557329 SLC44A2Q8IWA5 706 aaPredicted RBP4.11□□□□□ -1.75
CHD8-212ENST00000557329 ARL14EPQ8N8R7 260 aaPredicted RBP4.11□□□□□ -1.75
CHD8-212ENST00000557329 SEPT8Q92599 483 aa4.11□□□□□ -1.75
CHD8-212ENST00000557329 NEK1Q96PY6 1258 aa4.11□□□□□ -1.75
CHD8-212ENST00000557329 PIGSQ96S52 555 aa4.11□□□□□ -1.75
CHD8-212ENST00000557329 RMDN3Q96TC7 470 aa4.11□□□□□ -1.75
CHD8-212ENST00000557329 PIMREGQ9BSJ6 248 aa4.11□□□□□ -1.75
CHD8-212ENST00000557329 SCNM1Q9BWG6 230 aa4.11□□□□□ -1.75
CHD8-212ENST00000557329 BRD8Q9H0E9 1235 aa4.11□□□□□ -1.75
CHD8-212ENST00000557329 OBP2BQ9NPH6 170 aa4.11□□□□□ -1.75
CHD8-212ENST00000557329 PIH1D3Q9NQM4 214 aaKnown RBP4.11□□□□□ -1.75
CHD8-212ENST00000557329 THSD1Q9NS62 852 aa4.11□□□□□ -1.75
CHD8-212ENST00000557329 DACT1Q9NYF0 836 aa4.11□□□□□ -1.75
CHD8-212ENST00000557329 FNIP2Q9P278 1114 aa4.11□□□□□ -1.75
CHD8-212ENST00000557329 SWAP70Q9UH65 585 aa4.11□□□□□ -1.75
CHD8-212ENST00000557329 CDC23Q9UJX2 597 aa4.11□□□□□ -1.75
CHD8-212ENST00000557329 Q9Y3F1 56 aa4.11□□□□□ -1.75
CHD8-212ENST00000557329 COPG1Q9Y678 874 aaKnown RBP4.11□□□□□ -1.75
CHD8-212ENST00000557329 SLC4A4Q9Y6R1 1079 aa4.11□□□□□ -1.75
CHD8-212ENST00000557329 PDS5AQ29RF7 1337 aaKnown RBP4.11□□□□□ -1.75
CHD8-212ENST00000557329 COL11A1P12107 1806 aaPredicted RBP4.11□□□□□ -1.75
CHD8-212ENST00000557329 ZNF236Q9UL36 1845 aa4.11□□□□□ -1.75
CHD8-212ENST00000557329 ROBO3Q96MS0 1386 aa4.11□□□□□ -1.75
CHD8-212ENST00000557329 TRIOO75962 3097 aa4.1□□□□□ -1.75
CHD8-212ENST00000557329 TET1Q8NFU7 2136 aa4.1□□□□□ -1.75
CHD8-212ENST00000557329 MYO7AQ13402 2215 aa4.1□□□□□ -1.75
CHD8-212ENST00000557329 SIP14410 1827 aa4.1□□□□□ -1.75
CHD8-212ENST00000557329 KMT2EQ8IZD2 1858 aa4.1□□□□□ -1.75
CHD8-212ENST00000557329 EIF4E1BA6NMX2 242 aaKnown RBP4.1□□□□□ -1.75
CHD8-212ENST00000557329 SLC38A8A6NNN8 435 aa4.1□□□□□ -1.75
CHD8-212ENST00000557329 LGALS16A8MUM7 142 aa4.1□□□□□ -1.75
CHD8-212ENST00000557329 B4DGG1 531 aa4.1□□□□□ -1.75
CHD8-212ENST00000557329 H3BNX3 289 aa4.1□□□□□ -1.75
CHD8-212ENST00000557329 M0QZQ0 153 aa4.1□□□□□ -1.75
CHD8-212ENST00000557329 CSTBP04080 98 aaKnown RBP4.1□□□□□ -1.75
CHD8-212ENST00000557329 ALDOCP09972 364 aaKnown RBP4.1□□□□□ -1.75
CHD8-212ENST00000557329 WEE2P0C1S8 567 aa4.1□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms