RNA–Protein interactions for RNA: ENST00000557275.5

SYNE3-205, Transcript of spectrin repeat containing nuclear envelope family member 3, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SYNE3, Length 13,488 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3-205ENST00000557275 REXO1L1PQ8IX06 675 aa8.85□□□□□ -0.99
SYNE3-205ENST00000557275 GRAPLQ8TC17 118 aaPredicted RBP8.85□□□□□ -0.99
SYNE3-205ENST00000557275 PGAP3Q96FM1 320 aaPredicted RBP8.85□□□□□ -0.99
SYNE3-205ENST00000557275 EHD4Q9H223 541 aa8.85□□□□□ -0.99
SYNE3-205ENST00000557275 ABCD2Q9UBJ2 740 aa8.85□□□□□ -0.99
SYNE3-205ENST00000557275 NARSO43776 548 aaKnown RBP8.85□□□□□ -0.99
SYNE3-205ENST00000557275 PDHBP11177 359 aa8.85□□□□□ -0.99
SYNE3-205ENST00000557275 GLT6D1Q7Z4J2 308 aa8.85□□□□□ -0.99
SYNE3-205ENST00000557275 TMC3Q7Z5M5 1100 aa8.85□□□□□ -0.99
SYNE3-205ENST00000557275 SELENOMQ8WWX9 145 aa8.85□□□□□ -0.99
SYNE3-205ENST00000557275 CASKIN2Q8WXE0 1202 aa8.85□□□□□ -0.99
SYNE3-205ENST00000557275 RANBP3Q9H6Z4 567 aaPredicted RBP8.85□□□□□ -0.99
SYNE3-205ENST00000557275 CALML5Q9NZT1 146 aa8.85□□□□□ -0.99
SYNE3-205ENST00000557275 MAB21L2Q9Y586 359 aa8.85□□□□□ -0.99
SYNE3-205ENST00000557275 PCYT1BQ9Y5K3 369 aaPredicted RBP8.85□□□□□ -0.99
SYNE3-205ENST00000557275 USP17L15C9J2P7 530 aa8.85□□□□□ -0.99
SYNE3-205ENST00000557275 USP17L13C9JLJ4 530 aa8.85□□□□□ -0.99
SYNE3-205ENST00000557275 USP17L11C9JVI0 530 aa8.85□□□□□ -0.99
SYNE3-205ENST00000557275 USP17L18D6R9N7 530 aa8.85□□□□□ -0.99
SYNE3-205ENST00000557275 USP17L22D6RA61 530 aa8.85□□□□□ -0.99
SYNE3-205ENST00000557275 USP17L17D6RBQ6 530 aa8.85□□□□□ -0.99
SYNE3-205ENST00000557275 USP17L19D6RCP7 530 aa8.85□□□□□ -0.99
SYNE3-205ENST00000557275 USP17L20D6RJB6 530 aa8.85□□□□□ -0.99
SYNE3-205ENST00000557275 CTSKP43235 329 aa8.85□□□□□ -0.99
SYNE3-205ENST00000557275 USP17L24Q0WX57 530 aa8.85□□□□□ -0.99
SYNE3-205ENST00000557275 USP17L6PQ6QN14 398 aa8.85□□□□□ -0.99
SYNE3-205ENST00000557275 SNX32Q86XE0 403 aa8.85□□□□□ -0.99
SYNE3-205ENST00000557275 BRSK2Q8IWQ3 736 aa8.85□□□□□ -0.99
SYNE3-205ENST00000557275 DNAJC10Q8IXB1 793 aa8.85□□□□□ -0.99
SYNE3-205ENST00000557275 DCAKDQ8WVC6 231 aa8.85□□□□□ -0.99
SYNE3-205ENST00000557275 GRIN2DO15399 1336 aa8.85□□□□□ -0.99
SYNE3-205ENST00000557275 CRKLP46109 303 aaKnown RBP8.85□□□□□ -0.99
SYNE3-205ENST00000557275 APLP1P51693 650 aa8.85□□□□□ -0.99
SYNE3-205ENST00000557275 ATXN1P54253 815 aaKnown RBP8.85□□□□□ -0.99
SYNE3-205ENST00000557275 PARP6Q2NL67 630 aa8.85□□□□□ -0.99
SYNE3-205ENST00000557275 RANBP3LQ86VV4 465 aaPredicted RBP8.85□□□□□ -0.99
SYNE3-205ENST00000557275 WDR49Q8IV35 697 aa8.85□□□□□ -0.99
SYNE3-205ENST00000557275 TRNT1Q96Q11 434 aaKnown RBP8.85□□□□□ -0.99
SYNE3-205ENST00000557275 PARK7Q99497 189 aaKnown RBP8.85□□□□□ -0.99
SYNE3-205ENST00000557275 ZNF358Q9NW07 568 aa8.85□□□□□ -0.99
SYNE3-205ENST00000557275 TMED5Q9Y3A6 229 aa8.85□□□□□ -0.99
SYNE3-205ENST00000557275 POU5F1Q01860 360 aaKnown RBP8.85□□□□□ -0.99
SYNE3-205ENST00000557275 NDNQ99608 321 aa8.85□□□□□ -0.99
SYNE3-205ENST00000557275 TMEM47Q9BQJ4 181 aa8.85□□□□□ -0.99
SYNE3-205ENST00000557275 NUDT15Q9NV35 164 aa8.85□□□□□ -0.99
SYNE3-205ENST00000557275 WASF3Q9UPY6 502 aa8.85□□□□□ -0.99
SYNE3-205ENST00000557275 TCOF1Q13428 1488 aaKnown RBP8.85□□□□□ -0.99
SYNE3-205ENST00000557275 RASGRP1O95267 797 aa8.85□□□□□ -0.99
SYNE3-205ENST00000557275 C9P02748 559 aa8.85□□□□□ -0.99
SYNE3-205ENST00000557275 RORCP51449 518 aa8.85□□□□□ -0.99
SYNE3-205ENST00000557275 ZNF268Q14587 947 aaPredicted RBP8.85□□□□□ -0.99
SYNE3-205ENST00000557275 HMBOX1Q6NT76 420 aa8.85□□□□□ -0.99
SYNE3-205ENST00000557275 ZYG11AQ6WRX3 759 aa8.85□□□□□ -0.99
SYNE3-205ENST00000557275 C14orf166Q9Y224 244 aaKnown RBP8.85□□□□□ -0.99
SYNE3-205ENST00000557275 ZNF638Q14966 1978 aaKnown RBP8.85□□□□□ -0.99
SYNE3-205ENST00000557275 TRIM64CA6NLI5 447 aa8.85□□□□□ -0.99
SYNE3-205ENST00000557275 GNALP38405 381 aa8.85□□□□□ -0.99
SYNE3-205ENST00000557275 KLHDC7AQ5VTJ3 777 aa8.85□□□□□ -0.99
SYNE3-205ENST00000557275 SERPINA13PQ6UXR4 307 aa8.85□□□□□ -0.99
SYNE3-205ENST00000557275 DNAJB8Q8NHS0 232 aa8.85□□□□□ -0.99
SYNE3-205ENST00000557275 RAET1EQ8TD07 263 aa8.85□□□□□ -0.99
SYNE3-205ENST00000557275 PYDC1Q8WXC3 89 aa8.85□□□□□ -0.99
SYNE3-205ENST00000557275 NSMCE3Q96MG7 304 aa8.85□□□□□ -0.99
SYNE3-205ENST00000557275 NECAB3Q96P71 396 aaPredicted RBP8.85□□□□□ -0.99
SYNE3-205ENST00000557275 TAS2R1Q9NYW7 299 aa8.85□□□□□ -0.99
SYNE3-205ENST00000557275 A0A096LPK6 155 aa8.85□□□□□ -0.99
SYNE3-205ENST00000557275 GPR182O15218 404 aa8.85□□□□□ -0.99
SYNE3-205ENST00000557275 RIPK2O43353 540 aa8.85□□□□□ -0.99
SYNE3-205ENST00000557275 KDM4BO94953 1096 aa8.85□□□□□ -0.99
SYNE3-205ENST00000557275 THOP1P52888 689 aa8.85□□□□□ -0.99
SYNE3-205ENST00000557275 CDK10Q15131 360 aa8.85□□□□□ -0.99
SYNE3-205ENST00000557275 GALNTL5Q7Z4T8 443 aa8.85□□□□□ -0.99
SYNE3-205ENST00000557275 CSGALNACT1Q8TDX6 532 aa8.85□□□□□ -0.99
SYNE3-205ENST00000557275 TLE3Q04726 772 aa8.85□□□□□ -0.99
SYNE3-205ENST00000557275 SPESP1Q6UW49 350 aa8.85□□□□□ -0.99
SYNE3-205ENST00000557275 LGR4Q9BXB1 951 aa8.85□□□□□ -0.99
SYNE3-205ENST00000557275 NAALADL1Q9UQQ1 740 aa8.85□□□□□ -0.99
SYNE3-205ENST00000557275 UMODL1Q5DID0 1318 aa8.85□□□□□ -0.99
SYNE3-205ENST00000557275 ZSCAN5CA6NGD5 496 aaPredicted RBP8.85□□□□□ -0.99
SYNE3-205ENST00000557275 PPM1BO75688 479 aa8.85□□□□□ -0.99
SYNE3-205ENST00000557275 SAGP10523 405 aaPredicted RBP8.85□□□□□ -0.99
SYNE3-205ENST00000557275 ANXA3P12429 323 aa8.85□□□□□ -0.99
SYNE3-205ENST00000557275 GRIA2P42262 883 aa8.85□□□□□ -0.99
SYNE3-205ENST00000557275 CYP2R1Q6VVX0 501 aa8.85□□□□□ -0.99
SYNE3-205ENST00000557275 KCTD4Q8WVF5 259 aa8.85□□□□□ -0.99
SYNE3-205ENST00000557275 HTRA1Q92743 480 aa8.85□□□□□ -0.99
SYNE3-205ENST00000557275 EVPLQ92817 2033 aa8.85□□□□□ -0.99
SYNE3-205ENST00000557275 WASHC1A8K0Z3 465 aa8.85□□□□□ -0.99
SYNE3-205ENST00000557275 WASH3PC4AMC7 463 aa8.85□□□□□ -0.99
SYNE3-205ENST00000557275 ALDH5A1P51649 535 aaPredicted RBP8.85□□□□□ -0.99
SYNE3-205ENST00000557275 CACNB2Q08289 660 aaPredicted RBP8.85□□□□□ -0.99
SYNE3-205ENST00000557275 DOK7Q18PE1 504 aa8.85□□□□□ -0.99
SYNE3-205ENST00000557275 EIPR1Q53HC9 387 aa8.85□□□□□ -0.99
SYNE3-205ENST00000557275 WASH2PQ6VEQ5 465 aa8.85□□□□□ -0.99
SYNE3-205ENST00000557275 LAPTM4BQ86VI4 370 aa8.85□□□□□ -0.99
SYNE3-205ENST00000557275 C7orf61Q8IZ16 206 aa8.85□□□□□ -0.99
SYNE3-205ENST00000557275 C1GALT1C1Q96EU7 318 aa8.85□□□□□ -0.99
SYNE3-205ENST00000557275 CHP1Q99653 195 aa8.85□□□□□ -0.99
SYNE3-205ENST00000557275 SLC22A2O15244 555 aa8.84□□□□□ -0.99
SYNE3-205ENST00000557275 GNAO1P09471 354 aa8.84□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms