RNA–Protein interactions for RNA: ENST00000557222.5

VRK1-206, Transcript of vaccinia related kinase 1, humanhuman

TSL 5

Gene VRK1, Length 1,029 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-206ENST00000557222 ATL2Q8NHH9 583 aa8.76□□□□□ -1.01
VRK1-206ENST00000557222 CENPIQ92674 756 aaPredicted RBP8.76□□□□□ -1.01
VRK1-206ENST00000557222 VOPP1Q96AW1 172 aa8.76□□□□□ -1.01
VRK1-206ENST00000557222 TMEM159Q96B96 161 aa8.76□□□□□ -1.01
VRK1-206ENST00000557222 CFAP57Q96MR6 1250 aa8.76□□□□□ -1.01
VRK1-206ENST00000557222 GDAP1L1Q96MZ0 367 aa8.76□□□□□ -1.01
VRK1-206ENST00000557222 LRRC61Q9BV99 259 aa8.76□□□□□ -1.01
VRK1-206ENST00000557222 STK33Q9BYT3 514 aa8.76□□□□□ -1.01
VRK1-206ENST00000557222 CPEB1Q9BZB8 566 aaKnown RBP8.76□□□□□ -1.01
VRK1-206ENST00000557222 TM6SF2Q9BZW4 377 aa8.76□□□□□ -1.01
VRK1-206ENST00000557222 TTYH3Q9C0H2 523 aa8.76□□□□□ -1.01
VRK1-206ENST00000557222 STRADBQ9C0K7 418 aa8.76□□□□□ -1.01
VRK1-206ENST00000557222 PLCB1Q9NQ66 1216 aa8.76□□□□□ -1.01
VRK1-206ENST00000557222 AJAP1Q9UKB5 411 aaPredicted RBP8.76□□□□□ -1.01
VRK1-206ENST00000557222 DAAM1Q9Y4D1 1078 aa8.76□□□□□ -1.01
VRK1-206ENST00000557222 UBR5O95071 2799 aaPredicted RBP8.76□□□□□ -1.01
VRK1-206ENST00000557222 UNC13CQ8NB66 2214 aa8.76□□□□□ -1.01
VRK1-206ENST00000557222 PTPN13Q12923 2485 aa8.75□□□□□ -1.01
VRK1-206ENST00000557222 COL27A1Q8IZC6 1860 aaPredicted RBP8.75□□□□□ -1.01
VRK1-206ENST00000557222 CFAP69A5D8W1 941 aa8.75□□□□□ -1.01
VRK1-206ENST00000557222 KRIT1O00522 736 aa8.75□□□□□ -1.01
VRK1-206ENST00000557222 RAMP2O60895 175 aa8.75□□□□□ -1.01
VRK1-206ENST00000557222 GADD45BO75293 160 aaPredicted RBP8.75□□□□□ -1.01
VRK1-206ENST00000557222 TNFSF15O95150 251 aa8.75□□□□□ -1.01
VRK1-206ENST00000557222 CYP1A1P04798 512 aaPredicted RBP8.75□□□□□ -1.01
VRK1-206ENST00000557222 UGT2B4P06133 528 aa8.75□□□□□ -1.01
VRK1-206ENST00000557222 UCHL3P15374 230 aa8.75□□□□□ -1.01
VRK1-206ENST00000557222 PNLIPP16233 465 aa8.75□□□□□ -1.01
VRK1-206ENST00000557222 TSHRP16473 764 aa8.75□□□□□ -1.01
VRK1-206ENST00000557222 MMP8P22894 467 aa8.75□□□□□ -1.01
VRK1-206ENST00000557222 ERCC5P28715 1186 aaPredicted RBP8.75□□□□□ -1.01
VRK1-206ENST00000557222 SDC4P31431 198 aa8.75□□□□□ -1.01
VRK1-206ENST00000557222 IGFALSP35858 605 aa8.75□□□□□ -1.01
VRK1-206ENST00000557222 EIF4A3P38919 411 aaKnown RBP8.75□□□□□ -1.01
VRK1-206ENST00000557222 HK3P52790 923 aa8.75□□□□□ -1.01
VRK1-206ENST00000557222 INHBCP55103 352 aa8.75□□□□□ -1.01
VRK1-206ENST00000557222 GSCP56915 257 aaPredicted RBP8.75□□□□□ -1.01
VRK1-206ENST00000557222 YBEYP58557 167 aaPredicted RBP8.75□□□□□ -1.01
VRK1-206ENST00000557222 NOMO3P69849 1222 aa8.75□□□□□ -1.01
VRK1-206ENST00000557222 RAPGEF1Q13905 1077 aa8.75□□□□□ -1.01
VRK1-206ENST00000557222 TMEM52BQ4KMG9 183 aa8.75□□□□□ -1.01
VRK1-206ENST00000557222 CT47A1Q5JQC4 288 aaPredicted RBP8.75□□□□□ -1.01
VRK1-206ENST00000557222 MIIPQ5JXC2 388 aa8.75□□□□□ -1.01
VRK1-206ENST00000557222 TPRG1LQ5T0D9 272 aa8.75□□□□□ -1.01
VRK1-206ENST00000557222 TRNP1Q6NT89 227 aa8.75□□□□□ -1.01
VRK1-206ENST00000557222 GKN2Q86XP6 184 aa8.75□□□□□ -1.01
VRK1-206ENST00000557222 RYBPQ8N488 228 aaPredicted RBP8.75□□□□□ -1.01
VRK1-206ENST00000557222 DTWD1Q8N5C7 304 aa8.75□□□□□ -1.01
VRK1-206ENST00000557222 ARL10Q8N8L6 244 aa8.75□□□□□ -1.01
VRK1-206ENST00000557222 TP53I13Q8NBR0 393 aaPredicted RBP8.75□□□□□ -1.01
VRK1-206ENST00000557222 CXorf40AQ8TE69 158 aa8.75□□□□□ -1.01
VRK1-206ENST00000557222 NTAN1Q96AB6 310 aa8.75□□□□□ -1.01
VRK1-206ENST00000557222 TBC1D31Q96DN5 1066 aa8.75□□□□□ -1.01
VRK1-206ENST00000557222 KLHL32Q96NJ5 620 aa8.75□□□□□ -1.01
VRK1-206ENST00000557222 CCNL2Q96S94 520 aaPredicted RBP8.75□□□□□ -1.01
VRK1-206ENST00000557222 CCDC3Q9BQI4 270 aa8.75□□□□□ -1.01
VRK1-206ENST00000557222 TUBGCP2Q9BSJ2 902 aa8.75□□□□□ -1.01
VRK1-206ENST00000557222 B3GNT4Q9C0J1 378 aa8.75□□□□□ -1.01
VRK1-206ENST00000557222 CLPBQ9H078 707 aa8.75□□□□□ -1.01
VRK1-206ENST00000557222 DONSONQ9NYP3 566 aa8.75□□□□□ -1.01
VRK1-206ENST00000557222 BSNQ9UPA5 3926 aa8.74□□□□□ -1.01
VRK1-206ENST00000557222 FLNCQ14315 2725 aa8.74□□□□□ -1.01
VRK1-206ENST00000557222 TSPAN11A1L157 253 aa8.74□□□□□ -1.01
VRK1-206ENST00000557222 C2CD4BA6NLJ0 364 aa8.74□□□□□ -1.01
VRK1-206ENST00000557222 WASH4PA8MWX3 477 aa8.74□□□□□ -1.01
VRK1-206ENST00000557222 GOLGA8SH3BPF8 625 aa8.74□□□□□ -1.01
VRK1-206ENST00000557222 PLD2O14939 933 aa8.74□□□□□ -1.01
VRK1-206ENST00000557222 NVLO15381 856 aaKnown RBP8.74□□□□□ -1.01
VRK1-206ENST00000557222 BUB1O43683 1085 aa8.74□□□□□ -1.01
VRK1-206ENST00000557222 LRIG2O94898 1065 aa8.74□□□□□ -1.01
VRK1-206ENST00000557222 RASGRP1O95267 797 aa8.74□□□□□ -1.01
VRK1-206ENST00000557222 GJB6O95452 261 aa8.74□□□□□ -1.01
VRK1-206ENST00000557222 IGSF6O95976 241 aa8.74□□□□□ -1.01
VRK1-206ENST00000557222 GHRHP01286 108 aa8.74□□□□□ -1.01
VRK1-206ENST00000557222 PLEKP08567 350 aaPredicted RBP8.74□□□□□ -1.01
VRK1-206ENST00000557222 HOXC4P09017 264 aaPredicted RBP8.74□□□□□ -1.01
VRK1-206ENST00000557222 PNMA6AP0CW24 399 aaPredicted RBP8.74□□□□□ -1.01
VRK1-206ENST00000557222 SFTPCP11686 197 aa8.74□□□□□ -1.01
VRK1-206ENST00000557222 HTR1BP28222 390 aa8.74□□□□□ -1.01
VRK1-206ENST00000557222 CCKBRP32239 447 aa8.74□□□□□ -1.01
VRK1-206ENST00000557222 PDX1P52945 283 aa8.74□□□□□ -1.01
VRK1-206ENST00000557222 AIF1P55008 147 aa8.74□□□□□ -1.01
VRK1-206ENST00000557222 UBE2HP62256 183 aa8.74□□□□□ -1.01
VRK1-206ENST00000557222 ATP11AP98196 1134 aa8.74□□□□□ -1.01
VRK1-206ENST00000557222 LRRC14Q15048 493 aa8.74□□□□□ -1.01
VRK1-206ENST00000557222 CCDC14Q49A88 953 aa8.74□□□□□ -1.01
VRK1-206ENST00000557222 NKAPLQ5M9Q1 402 aa8.74□□□□□ -1.01
VRK1-206ENST00000557222 RWDD4Q6NW29 188 aaKnown RBP8.74□□□□□ -1.01
VRK1-206ENST00000557222 TRIM72Q6ZMU5 477 aa8.74□□□□□ -1.01
VRK1-206ENST00000557222 NOP9Q86U38 636 aaKnown RBP8.74□□□□□ -1.01
VRK1-206ENST00000557222 VPS36Q86VN1 386 aa8.74□□□□□ -1.01
VRK1-206ENST00000557222 RBFAQ8N0V3 343 aa8.74□□□□□ -1.01
VRK1-206ENST00000557222 FBXO39Q8N4B4 442 aa8.74□□□□□ -1.01
VRK1-206ENST00000557222 RXFP2Q8WXD0 754 aa8.74□□□□□ -1.01
VRK1-206ENST00000557222 CPA5Q8WXQ8 436 aa8.74□□□□□ -1.01
VRK1-206ENST00000557222 TMEM74Q96NL1 305 aa8.74□□□□□ -1.01
VRK1-206ENST00000557222 GFM1Q96RP9 751 aaKnown RBP8.74□□□□□ -1.01
VRK1-206ENST00000557222 EDEM3Q9BZQ6 932 aa8.74□□□□□ -1.01
VRK1-206ENST00000557222 SEMA4CQ9C0C4 833 aa8.74□□□□□ -1.01
VRK1-206ENST00000557222 TCEAL2Q9H3H9 227 aaPredicted RBP8.74□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms