RNA–Protein interactions for RNA: ENST00000557159.5

APEX1-216, Transcript of apurinic/apyrimidinic endodeoxyribonuclease 1, humanhuman

TSL 2

Gene APEX1, Length 1,803 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APEX1-216ENST00000557159 VMP1Q96GC9 406 aa12.61□□□□□ -0.39
APEX1-216ENST00000557159 HPDLQ96IR7 371 aa12.61□□□□□ -0.39
APEX1-216ENST00000557159 UBXN10Q96LJ8 280 aa12.61□□□□□ -0.39
APEX1-216ENST00000557159 TRMOQ9BU70 441 aa12.61□□□□□ -0.39
APEX1-216ENST00000557159 KATNBL1Q9H079 304 aa12.61□□□□□ -0.39
APEX1-216ENST00000557159 ABHD16BQ9H3Z7 469 aa12.61□□□□□ -0.39
APEX1-216ENST00000557159 INTS10Q9NVR2 710 aaKnown RBP12.61□□□□□ -0.39
APEX1-216ENST00000557159 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.61□□□□□ -0.39
APEX1-216ENST00000557159 SLC39A10Q9ULF5 831 aa12.61□□□□□ -0.39
APEX1-216ENST00000557159 FZD10Q9ULW2 581 aa12.61□□□□□ -0.39
APEX1-216ENST00000557159 VWA7Q9Y334 891 aa12.61□□□□□ -0.39
APEX1-216ENST00000557159 NDUFAF1Q9Y375 327 aa12.61□□□□□ -0.39
APEX1-216ENST00000557159 HES2Q9Y543 173 aa12.61□□□□□ -0.39
APEX1-216ENST00000557159 CORINQ9Y5Q5 1042 aa12.61□□□□□ -0.39
APEX1-216ENST00000557159 SNX9Q9Y5X1 595 aa12.61□□□□□ -0.39
APEX1-216ENST00000557159 PTCH2Q9Y6C5 1203 aa12.61□□□□□ -0.39
APEX1-216ENST00000557159 EVPLQ92817 2033 aa12.61□□□□□ -0.39
APEX1-216ENST00000557159 RNF103-CHMP3A0A140T963 221 aa12.6□□□□□ -0.39
APEX1-216ENST00000557159 E2F8A0AVK6 867 aa12.6□□□□□ -0.39
APEX1-216ENST00000557159 TMX2-CTNND1H3BSU7 103 aa12.6□□□□□ -0.39
APEX1-216ENST00000557159 NTRK1P04629 796 aa12.6□□□□□ -0.39
APEX1-216ENST00000557159 NFICP08651 508 aa12.6□□□□□ -0.39
APEX1-216ENST00000557159 ELNP15502 786 aa12.6□□□□□ -0.39
APEX1-216ENST00000557159 ZNF182P17025 639 aaPredicted RBP12.6□□□□□ -0.39
APEX1-216ENST00000557159 GOT1P17174 413 aa12.6□□□□□ -0.39
APEX1-216ENST00000557159 CCR10P46092 362 aa12.6□□□□□ -0.39
APEX1-216ENST00000557159 ARCN1P48444 511 aaKnown RBP12.6□□□□□ -0.39
APEX1-216ENST00000557159 SLC7A2P52569 658 aa12.6□□□□□ -0.39
APEX1-216ENST00000557159 HNRNPFP52597 415 aaKnown RBP12.6□□□□□ -0.39
APEX1-216ENST00000557159 RAB10P61026 200 aa12.6□□□□□ -0.39
APEX1-216ENST00000557159 USP10Q14694 798 aaKnown RBP12.6□□□□□ -0.39
APEX1-216ENST00000557159 PCBP1Q15365 356 aaKnown RBP eCLIP12.6□□□□□ -0.39
APEX1-216ENST00000557159 CYP2A13Q16696 494 aa12.6□□□□□ -0.39
APEX1-216ENST00000557159 INTS6LQ5JSJ4 861 aaKnown RBP12.6□□□□□ -0.39
APEX1-216ENST00000557159 BROXQ5VW32 411 aa12.6□□□□□ -0.39
APEX1-216ENST00000557159 CES3Q6UWW8 571 aa12.6□□□□□ -0.39
APEX1-216ENST00000557159 CCDC117Q8IWD4 279 aaPredicted RBP12.6□□□□□ -0.39
APEX1-216ENST00000557159 ZC3H7AQ8IWR0 971 aaKnown RBP12.6□□□□□ -0.39
APEX1-216ENST00000557159 ADGRG5Q8IZF4 528 aa12.6□□□□□ -0.39
APEX1-216ENST00000557159 TSPEARQ8WU66 669 aa12.6□□□□□ -0.39
APEX1-216ENST00000557159 SCYL1Q96KG9 808 aa12.6□□□□□ -0.39
APEX1-216ENST00000557159 BTN2A3PQ96KV6 586 aa12.6□□□□□ -0.39
APEX1-216ENST00000557159 MARK4Q96L34 752 aa12.6□□□□□ -0.39
APEX1-216ENST00000557159 PPP1R36Q96LQ0 422 aa12.6□□□□□ -0.39
APEX1-216ENST00000557159 ALPK1Q96QP1 1244 aa12.6□□□□□ -0.39
APEX1-216ENST00000557159 KIFC1Q9BW19 673 aa12.6□□□□□ -0.39
APEX1-216ENST00000557159 CDT1Q9H211 546 aa12.6□□□□□ -0.39
APEX1-216ENST00000557159 TUT1Q9H6E5 874 aaKnown RBP12.6□□□□□ -0.39
APEX1-216ENST00000557159 HMG20AQ9NP66 347 aa12.6□□□□□ -0.39
APEX1-216ENST00000557159 PDGFCQ9NRA1 345 aa12.6□□□□□ -0.39
APEX1-216ENST00000557159 XPR1Q9UBH6 696 aa12.6□□□□□ -0.39
APEX1-216ENST00000557159 TRHDEQ9UKU6 1024 aa12.6□□□□□ -0.39
APEX1-216ENST00000557159 CCDC85CA6NKD9 419 aa12.6□□□□□ -0.39
APEX1-216ENST00000557159 SAC3D1A6NKF1 404 aa12.6□□□□□ -0.39
APEX1-216ENST00000557159 PSMD3O43242 534 aa12.6□□□□□ -0.39
APEX1-216ENST00000557159 FOXD2O60548 495 aaPredicted RBP12.6□□□□□ -0.39
APEX1-216ENST00000557159 CXCL8P10145 99 aa12.6□□□□□ -0.39
APEX1-216ENST00000557159 GSTM2P28161 218 aa12.6□□□□□ -0.39
APEX1-216ENST00000557159 GRK4P32298 578 aa12.6□□□□□ -0.39
APEX1-216ENST00000557159 RFC2P35250 354 aa12.6□□□□□ -0.39
APEX1-216ENST00000557159 TNK2Q07912 1038 aa12.6□□□□□ -0.39
APEX1-216ENST00000557159 TRAF2Q12933 501 aa12.6□□□□□ -0.39
APEX1-216ENST00000557159 RBM48Q5RL73 367 aaKnown RBP12.6□□□□□ -0.39
APEX1-216ENST00000557159 PDZD4Q76G19 769 aaPredicted RBP12.6□□□□□ -0.39
APEX1-216ENST00000557159 PTRH1Q86Y79 214 aaKnown RBP12.6□□□□□ -0.39
APEX1-216ENST00000557159 TBC1D21Q8IYX1 336 aa12.6□□□□□ -0.39
APEX1-216ENST00000557159 LINC01465Q8N7H1 131 aa12.6□□□□□ -0.39
APEX1-216ENST00000557159 SLAIN1Q8ND83 568 aa12.6□□□□□ -0.39
APEX1-216ENST00000557159 COPS5Q92905 334 aa12.6□□□□□ -0.39
APEX1-216ENST00000557159 ATXN7L3BQ96GX2 97 aa12.6□□□□□ -0.39
APEX1-216ENST00000557159 VAT1Q99536 393 aa12.6□□□□□ -0.39
APEX1-216ENST00000557159 CTRCQ99895 268 aa12.6□□□□□ -0.39
APEX1-216ENST00000557159 MUC3BQ9H195 1237 aa12.6□□□□□ -0.39
APEX1-216ENST00000557159 RAD21L1Q9H4I0 556 aa12.6□□□□□ -0.39
APEX1-216ENST00000557159 IFT80Q9P2H3 777 aaPredicted RBP12.6□□□□□ -0.39
APEX1-216ENST00000557159 LACTBL1A8MY62 500 aa12.59□□□□□ -0.39
APEX1-216ENST00000557159 PFDN6O15212 129 aa12.59□□□□□ -0.39
APEX1-216ENST00000557159 ABCB7O75027 752 aa12.59□□□□□ -0.39
APEX1-216ENST00000557159 GPC4O75487 556 aa12.59□□□□□ -0.39
APEX1-216ENST00000557159 GABBR2O75899 941 aa12.59□□□□□ -0.39
APEX1-216ENST00000557159 PABPC1P11940 636 aaKnown RBP12.59□□□□□ -0.39
APEX1-216ENST00000557159 MATN1P21941 496 aa12.59□□□□□ -0.39
APEX1-216ENST00000557159 PTPN3P26045 913 aa12.59□□□□□ -0.39
APEX1-216ENST00000557159 ACADSBP45954 432 aa12.59□□□□□ -0.39
APEX1-216ENST00000557159 RPS9P46781 194 aaKnown RBP12.59□□□□□ -0.39
APEX1-216ENST00000557159 LEPRP48357 1165 aaKnown RBP12.59□□□□□ -0.39
APEX1-216ENST00000557159 CLCN3P51790 818 aa12.59□□□□□ -0.39
APEX1-216ENST00000557159 RBP5P82980 135 aa12.59□□□□□ -0.39
APEX1-216ENST00000557159 MFSD14CQ5VZR4 134 aa12.59□□□□□ -0.39
APEX1-216ENST00000557159 BSPRYQ5W0U4 402 aa12.59□□□□□ -0.39
APEX1-216ENST00000557159 IQSEC1Q6DN90 963 aa12.59□□□□□ -0.39
APEX1-216ENST00000557159 JADE1Q6IE81 842 aa12.59□□□□□ -0.39
APEX1-216ENST00000557159 GALNT18Q6P9A2 607 aa12.59□□□□□ -0.39
APEX1-216ENST00000557159 LARP4Q71RC2 724 aaKnown RBP eCLIP12.59□□□□□ -0.395e-6■■■□□ 16.1
APEX1-216ENST00000557159 PID1Q7Z2X4 250 aa12.59□□□□□ -0.39
APEX1-216ENST00000557159 BNIPLQ7Z465 357 aa12.59□□□□□ -0.39
APEX1-216ENST00000557159 CPNE9Q8IYJ1 553 aa12.59□□□□□ -0.39
APEX1-216ENST00000557159 CMTR2Q8IYT2 770 aaKnown RBP12.59□□□□□ -0.39
APEX1-216ENST00000557159 CCDC185Q8N715 623 aa12.59□□□□□ -0.39
APEX1-216ENST00000557159 ACVR1CQ8NER5 493 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 73.3 ms