RNA–Protein interactions for RNA: ENST00000556973.1

LINC00239-201, long intergenic non-protein coding RNA 239, humanhuman

TSL 3 BASIC

Gene LINC00239, Length 639 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00239-201ENST00000556973 SETD7Q8WTS6 366 aaKnown RBP10.72□□□□□ -0.69
LINC00239-201ENST00000556973 TADA1Q96BN2 335 aa10.72□□□□□ -0.69
LINC00239-201ENST00000556973 QKIQ96PU8 341 aaKnown RBP eCLIP10.72□□□□□ -0.69
LINC00239-201ENST00000556973 MCCC1Q96RQ3 725 aaPredicted RBP10.72□□□□□ -0.69
LINC00239-201ENST00000556973 RBM15Q96T37 977 aaKnown RBP eCLIP10.72□□□□□ -0.69
LINC00239-201ENST00000556973 HERPUD2Q9BSE4 406 aa10.72□□□□□ -0.69
LINC00239-201ENST00000556973 MBNL1Q9NR56 388 aaKnown RBP10.72□□□□□ -0.69
LINC00239-201ENST00000556973 GPR27Q9NS67 375 aa10.72□□□□□ -0.69
LINC00239-201ENST00000556973 DNPEPQ9ULA0 475 aa10.72□□□□□ -0.69
LINC00239-201ENST00000556973 GVINP1Q7Z2Y8 2422 aa10.72□□□□□ -0.69
LINC00239-201ENST00000556973 A0A0J9YYE9 177 aa10.71□□□□□ -0.69
LINC00239-201ENST00000556973 NPIPB15A6NHN6 443 aaPredicted RBP10.71□□□□□ -0.69
LINC00239-201ENST00000556973 ZSCAN12O43309 604 aa10.71□□□□□ -0.69
LINC00239-201ENST00000556973 RECQL5O94762 991 aaPredicted RBP10.71□□□□□ -0.69
LINC00239-201ENST00000556973 HEXIM1O94992 359 aaKnown RBP10.71□□□□□ -0.69
LINC00239-201ENST00000556973 TRBC1P01850 177 aa10.71□□□□□ -0.69
LINC00239-201ENST00000556973 ITGAVP06756 1048 aa10.71□□□□□ -0.69
LINC00239-201ENST00000556973 ALPIP09923 528 aa10.71□□□□□ -0.69
LINC00239-201ENST00000556973 RBP3P10745 1247 aa10.71□□□□□ -0.69
LINC00239-201ENST00000556973 ZNF30P17039 623 aa10.71□□□□□ -0.69
LINC00239-201ENST00000556973 CTPS1P17812 591 aa10.71□□□□□ -0.69
LINC00239-201ENST00000556973 RBL1P28749 1068 aa10.71□□□□□ -0.69
LINC00239-201ENST00000556973 IGFALSP35858 605 aa10.71□□□□□ -0.69
LINC00239-201ENST00000556973 NOVA1P51513 510 aaKnown RBP10.71□□□□□ -0.69
LINC00239-201ENST00000556973 CDK18Q07002 472 aa10.71□□□□□ -0.69
LINC00239-201ENST00000556973 KLF1Q13351 362 aaPredicted RBP10.71□□□□□ -0.69
LINC00239-201ENST00000556973 MTM1Q13496 603 aa10.71□□□□□ -0.69
LINC00239-201ENST00000556973 PDE1CQ14123 709 aaPredicted RBP10.71□□□□□ -0.69
LINC00239-201ENST00000556973 INPP5AQ14642 412 aa10.71□□□□□ -0.69
LINC00239-201ENST00000556973 GSE1Q14687 1217 aa10.71□□□□□ -0.69
LINC00239-201ENST00000556973 ACOX1Q15067 660 aa10.71□□□□□ -0.69
LINC00239-201ENST00000556973 IRF4Q15306 451 aa10.71□□□□□ -0.69
LINC00239-201ENST00000556973 RPS6KA1Q15418 735 aa10.71□□□□□ -0.69
LINC00239-201ENST00000556973 SEL1L2Q5TEA6 688 aa10.71□□□□□ -0.69
LINC00239-201ENST00000556973 PSAPL1Q6NUJ1 521 aa10.71□□□□□ -0.69
LINC00239-201ENST00000556973 DARS2Q6PI48 645 aaKnown RBP10.71□□□□□ -0.69
LINC00239-201ENST00000556973 CRTC1Q6UUV9 634 aa10.71□□□□□ -0.69
LINC00239-201ENST00000556973 PTAR1Q7Z6K3 402 aaPredicted RBP10.71□□□□□ -0.69
LINC00239-201ENST00000556973 CDKL3Q8IVW4 592 aaPredicted RBP10.71□□□□□ -0.69
LINC00239-201ENST00000556973 NAXDQ8IW45 347 aa10.71□□□□□ -0.69
LINC00239-201ENST00000556973 ZNF567Q8N184 647 aa10.71□□□□□ -0.69
LINC00239-201ENST00000556973 SLC22A18ASQ8N1D0 253 aa10.71□□□□□ -0.69
LINC00239-201ENST00000556973 DEFB124Q8NES8 71 aa10.71□□□□□ -0.69
LINC00239-201ENST00000556973 LPCAT1Q8NF37 534 aa10.71□□□□□ -0.69
LINC00239-201ENST00000556973 RHBDD1Q8TEB9 315 aa10.71□□□□□ -0.69
LINC00239-201ENST00000556973 SAP25Q8TEE9 199 aa10.71□□□□□ -0.69
LINC00239-201ENST00000556973 PDLIM2Q96JY6 352 aa10.71□□□□□ -0.69
LINC00239-201ENST00000556973 COQ10AQ96MF6 247 aa10.71□□□□□ -0.69
LINC00239-201ENST00000556973 FCRL5Q96RD9 977 aa10.71□□□□□ -0.69
LINC00239-201ENST00000556973 LYSMD1Q96S90 227 aa10.71□□□□□ -0.69
LINC00239-201ENST00000556973 MLPHQ9BV36 600 aaPredicted RBP10.71□□□□□ -0.69
LINC00239-201ENST00000556973 KLHL8Q9P2G9 620 aaPredicted RBP10.71□□□□□ -0.69
LINC00239-201ENST00000556973 DMXL1Q9Y485 3027 aa10.71□□□□□ -0.69
LINC00239-201ENST00000556973 DCHS1Q96JQ0 3298 aa10.7□□□□□ -0.7
LINC00239-201ENST00000556973 CAPN8A6NHC0 703 aa10.7□□□□□ -0.7
LINC00239-201ENST00000556973 CBFA2T3O75081 653 aa10.7□□□□□ -0.7
LINC00239-201ENST00000556973 STK10O94804 968 aaKnown RBP10.7□□□□□ -0.7
LINC00239-201ENST00000556973 MT-CYBP00156 380 aaPredicted RBP10.7□□□□□ -0.7
LINC00239-201ENST00000556973 GM2AP17900 193 aa10.7□□□□□ -0.7
LINC00239-201ENST00000556973 LHCGRP22888 699 aa10.7□□□□□ -0.7
LINC00239-201ENST00000556973 HTR1BP28222 390 aa10.7□□□□□ -0.7
LINC00239-201ENST00000556973 CD68P34810 354 aaPredicted RBP10.7□□□□□ -0.7
LINC00239-201ENST00000556973 GRK6P43250 576 aa10.7□□□□□ -0.7
LINC00239-201ENST00000556973 THOP1P52888 689 aa10.7□□□□□ -0.7
LINC00239-201ENST00000556973 IL9RQ01113 521 aa10.7□□□□□ -0.7
LINC00239-201ENST00000556973 PTSQ03393 145 aa10.7□□□□□ -0.7
LINC00239-201ENST00000556973 BNIP3Q12983 259 aa10.7□□□□□ -0.7
LINC00239-201ENST00000556973 FZD2Q14332 565 aa10.7□□□□□ -0.7
LINC00239-201ENST00000556973 PTPRRQ15256 657 aa10.7□□□□□ -0.7
LINC00239-201ENST00000556973 TRIP6Q15654 476 aaKnown RBP10.7□□□□□ -0.7
LINC00239-201ENST00000556973 CNGA3Q16281 694 aa10.7□□□□□ -0.7
LINC00239-201ENST00000556973 QPCTQ16769 361 aa10.7□□□□□ -0.7
LINC00239-201ENST00000556973 INAVAQ3KP66 663 aa10.7□□□□□ -0.7
LINC00239-201ENST00000556973 FAM182AQ5T1J6 154 aa10.7□□□□□ -0.7
LINC00239-201ENST00000556973 DENND2CQ68D51 928 aa10.7□□□□□ -0.7
LINC00239-201ENST00000556973 CCDC70Q6NSX1 233 aa10.7□□□□□ -0.7
LINC00239-201ENST00000556973 HSD11B1LQ7Z5J1 315 aa10.7□□□□□ -0.7
LINC00239-201ENST00000556973 TSPAN33Q86UF1 283 aa10.7□□□□□ -0.7
LINC00239-201ENST00000556973 NLRP8Q86W28 1048 aa10.7□□□□□ -0.7
LINC00239-201ENST00000556973 PARGQ86W56 976 aa10.7□□□□□ -0.7
LINC00239-201ENST00000556973 SPATA22Q8NHS9 363 aa10.7□□□□□ -0.7
LINC00239-201ENST00000556973 BTN2A2Q8WVV5 523 aa10.7□□□□□ -0.7
LINC00239-201ENST00000556973 CAMK1GQ96NX5 476 aa10.7□□□□□ -0.7
LINC00239-201ENST00000556973 SRPK1Q96SB4 655 aaKnown RBP10.7□□□□□ -0.7
LINC00239-201ENST00000556973 CDC6Q99741 560 aa10.7□□□□□ -0.7
LINC00239-201ENST00000556973 APOOQ9BUR5 198 aa10.7□□□□□ -0.7
LINC00239-201ENST00000556973 FRMD8P1Q9BZ68 369 aaPredicted RBP10.7□□□□□ -0.7
LINC00239-201ENST00000556973 CARD9Q9H257 536 aa10.7□□□□□ -0.7
LINC00239-201ENST00000556973 USP29Q9HBJ7 922 aa10.7□□□□□ -0.7
LINC00239-201ENST00000556973 MAGEE1Q9HCI5 957 aa10.7□□□□□ -0.7
LINC00239-201ENST00000556973 FAM153AQ9UHL3 310 aa10.7□□□□□ -0.7
LINC00239-201ENST00000556973 PCOLCE2Q9UKZ9 415 aa10.7□□□□□ -0.7
LINC00239-201ENST00000556973 WDR87Q6ZQQ6 2873 aa10.7□□□□□ -0.7
LINC00239-201ENST00000556973 COL5A1P20908 1838 aaPredicted RBP10.7□□□□□ -0.7
LINC00239-201ENST00000556973 LOC285095A0A1B0GVY8 99 aa10.69□□□□□ -0.7
LINC00239-201ENST00000556973 GIPC1O14908 333 aa10.69□□□□□ -0.7
LINC00239-201ENST00000556973 KCNN4O15554 427 aa10.69□□□□□ -0.7
LINC00239-201ENST00000556973 NDST3O95803 873 aa10.69□□□□□ -0.7
LINC00239-201ENST00000556973 EPOP01588 193 aa10.69□□□□□ -0.7
LINC00239-201ENST00000556973 CSF2P04141 144 aa10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms