RNA–Protein interactions for RNA: ENST00000556628.5

HNRNPC-226, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 1 (best) BASIC

Gene HNRNPC, Length 1,156 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-226ENST00000556628 TRIM7Q9C029 511 aa7.75□□□□□ -1.17
HNRNPC-226ENST00000556628 NRSN2Q9GZP1 204 aa7.75□□□□□ -1.17
HNRNPC-226ENST00000556628 PDFQ9HBH1 243 aa7.75□□□□□ -1.17
HNRNPC-226ENST00000556628 PCDH12Q9NPG4 1184 aa7.75□□□□□ -1.17
HNRNPC-226ENST00000556628 STAU2Q9NUL3 570 aaKnown RBP eCLIP7.75□□□□□ -1.17
HNRNPC-226ENST00000556628 CWC15Q9P013 229 aaKnown RBP7.75□□□□□ -1.17
HNRNPC-226ENST00000556628 SEPT3Q9UH03 358 aa7.75□□□□□ -1.17
HNRNPC-226ENST00000556628 IP6K2Q9UHH9 426 aa7.75□□□□□ -1.17
HNRNPC-226ENST00000556628 SALL4Q9UJQ4 1053 aa7.75□□□□□ -1.17
HNRNPC-226ENST00000556628 ANAPC7Q9UJX3 599 aa7.75□□□□□ -1.17
HNRNPC-226ENST00000556628 ATP8A1Q9Y2Q0 1164 aa7.75□□□□□ -1.17
HNRNPC-226ENST00000556628 LUC7L2Q9Y383 392 aaKnown RBP7.75□□□□□ -1.17
HNRNPC-226ENST00000556628 ADAMTS20P59510 1910 aa7.75□□□□□ -1.17
HNRNPC-226ENST00000556628 TSPAN11A1L157 253 aa7.74□□□□□ -1.17
HNRNPC-226ENST00000556628 CPED1A4D0V7 1026 aa7.74□□□□□ -1.17
HNRNPC-226ENST00000556628 CFAP69A5D8W1 941 aa7.74□□□□□ -1.17
HNRNPC-226ENST00000556628 MYO1FO00160 1098 aa7.74□□□□□ -1.17
HNRNPC-226ENST00000556628 TPP1O14773 563 aa7.74□□□□□ -1.17
HNRNPC-226ENST00000556628 RRP8O43159 456 aaKnown RBP7.74□□□□□ -1.17
HNRNPC-226ENST00000556628 OPA1O60313 960 aa7.74□□□□□ -1.17
HNRNPC-226ENST00000556628 RASGRP1O95267 797 aa7.74□□□□□ -1.17
HNRNPC-226ENST00000556628 TPM1P09493 284 aa7.74□□□□□ -1.17
HNRNPC-226ENST00000556628 ELFN1P0C7U0 828 aa7.74□□□□□ -1.17
HNRNPC-226ENST00000556628 GIMD1P0DJR0 217 aa7.74□□□□□ -1.17
HNRNPC-226ENST00000556628 ITIH2P19823 946 aa7.74□□□□□ -1.17
HNRNPC-226ENST00000556628 ACTN2P35609 894 aa7.74□□□□□ -1.17
HNRNPC-226ENST00000556628 HSPA9P38646 679 aaKnown RBP7.74□□□□□ -1.17
HNRNPC-226ENST00000556628 ABCG1P45844 678 aa7.74□□□□□ -1.17
HNRNPC-226ENST00000556628 LIG3P49916 1009 aa7.74□□□□□ -1.17
HNRNPC-226ENST00000556628 PEX5P50542 639 aa7.74□□□□□ -1.17
HNRNPC-226ENST00000556628 ADKP55263 362 aaKnown RBP7.74□□□□□ -1.17
HNRNPC-226ENST00000556628 AP1S1P61966 158 aa7.74□□□□□ -1.17
HNRNPC-226ENST00000556628 SEMG2Q02383 582 aa7.74□□□□□ -1.17
HNRNPC-226ENST00000556628 SRSF11Q05519 484 aaKnown RBP7.74□□□□□ -1.17
HNRNPC-226ENST00000556628 EIF2B5Q13144 721 aaKnown RBP7.74□□□□□ -1.17
HNRNPC-226ENST00000556628 KRT81Q14533 505 aa7.74□□□□□ -1.17
HNRNPC-226ENST00000556628 RTP5Q14D33 572 aa7.74□□□□□ -1.17
HNRNPC-226ENST00000556628 IRF4Q15306 451 aa7.74□□□□□ -1.17
HNRNPC-226ENST00000556628 ELOCQ15369 112 aa7.74□□□□□ -1.17
HNRNPC-226ENST00000556628 NR0B2Q15466 257 aa7.74□□□□□ -1.17
HNRNPC-226ENST00000556628 DPYSL2Q16555 572 aa7.74□□□□□ -1.17
HNRNPC-226ENST00000556628 SMTNL2Q2TAL5 461 aa7.74□□□□□ -1.17
HNRNPC-226ENST00000556628 COL28A1Q2UY09 1125 aa7.74□□□□□ -1.17
HNRNPC-226ENST00000556628 DEFB133Q30KQ1 61 aa7.74□□□□□ -1.17
HNRNPC-226ENST00000556628 PRRT3Q5FWE3 981 aa7.74□□□□□ -1.17
HNRNPC-226ENST00000556628 CCDC122Q5T0U0 273 aa7.74□□□□□ -1.17
HNRNPC-226ENST00000556628 ESRP1Q6NXG1 681 aaKnown RBP7.74□□□□□ -1.17
HNRNPC-226ENST00000556628 ALKBH5Q6P6C2 394 aaKnown RBP7.74□□□□□ -1.17
HNRNPC-226ENST00000556628 ENPP7Q6UWV6 458 aa7.74□□□□□ -1.17
HNRNPC-226ENST00000556628 ARHGAP12Q8IWW6 846 aa7.74□□□□□ -1.17
HNRNPC-226ENST00000556628 FSTL5Q8N475 847 aaPredicted RBP7.74□□□□□ -1.17
HNRNPC-226ENST00000556628 DCBLD1Q8N8Z6 715 aa7.74□□□□□ -1.17
HNRNPC-226ENST00000556628 FAM181AQ8N9Y4 354 aa7.74□□□□□ -1.17
HNRNPC-226ENST00000556628 IFI44Q8TCB0 444 aa7.74□□□□□ -1.17
HNRNPC-226ENST00000556628 MAPK15Q8TD08 544 aa7.74□□□□□ -1.17
HNRNPC-226ENST00000556628 PDCD6IPQ8WUM4 868 aaKnown RBP7.74□□□□□ -1.17
HNRNPC-226ENST00000556628 RFFLQ8WZ73 363 aa7.74□□□□□ -1.17
HNRNPC-226ENST00000556628 APOOQ9BUR5 198 aa7.74□□□□□ -1.17
HNRNPC-226ENST00000556628 NUP85Q9BW27 656 aa7.74□□□□□ -1.17
HNRNPC-226ENST00000556628 THAP2Q9H0W7 228 aa7.74□□□□□ -1.17
HNRNPC-226ENST00000556628 ZNF395Q9H8N7 513 aaPredicted RBP7.74□□□□□ -1.17
HNRNPC-226ENST00000556628 MBNL1Q9NR56 388 aaKnown RBP7.74□□□□□ -1.17
HNRNPC-226ENST00000556628 HAUS2Q9NVX0 235 aa7.74□□□□□ -1.17
HNRNPC-226ENST00000556628 IFNKQ9P0W0 207 aa7.74□□□□□ -1.17
HNRNPC-226ENST00000556628 CAPN11Q9UMQ6 739 aa7.74□□□□□ -1.17
HNRNPC-226ENST00000556628 COQ6Q9Y2Z9 468 aa7.74□□□□□ -1.17
HNRNPC-226ENST00000556628 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP7.74□□□□□ -1.178e-13■■■□□ 16.8
HNRNPC-226ENST00000556628 LRRK1Q38SD2 2015 aa7.74□□□□□ -1.17
HNRNPC-226ENST00000556628 USP24Q9UPU5 2620 aa7.74□□□□□ -1.17
HNRNPC-226ENST00000556628 EPG5Q9HCE0 2579 aa7.73□□□□□ -1.17
HNRNPC-226ENST00000556628 CACNB4O00305 520 aaPredicted RBP7.73□□□□□ -1.17
HNRNPC-226ENST00000556628 CBFA2T2O43439 604 aa7.73□□□□□ -1.17
HNRNPC-226ENST00000556628 BUB1BO60566 1050 aaPredicted RBP7.73□□□□□ -1.17
HNRNPC-226ENST00000556628 SOCS5O75159 536 aa7.73□□□□□ -1.17
HNRNPC-226ENST00000556628 CPP00450 1065 aa7.73□□□□□ -1.17
HNRNPC-226ENST00000556628 TNFP01375 233 aa7.73□□□□□ -1.17
HNRNPC-226ENST00000556628 PCCBP05166 539 aa7.73□□□□□ -1.17
HNRNPC-226ENST00000556628 ALPIP09923 528 aa7.73□□□□□ -1.17
HNRNPC-226ENST00000556628 RARAP10276 462 aa7.73□□□□□ -1.17
HNRNPC-226ENST00000556628 AMPD1P23109 780 aa7.73□□□□□ -1.17
HNRNPC-226ENST00000556628 KELP23276 732 aa7.73□□□□□ -1.17
HNRNPC-226ENST00000556628 MMP12P39900 470 aa7.73□□□□□ -1.17
HNRNPC-226ENST00000556628 PBX1P40424 430 aa7.73□□□□□ -1.17
HNRNPC-226ENST00000556628 RGRP47804 291 aa7.73□□□□□ -1.17
HNRNPC-226ENST00000556628 CDH6P55285 790 aa7.73□□□□□ -1.17
HNRNPC-226ENST00000556628 MTM1Q13496 603 aa7.73□□□□□ -1.17
HNRNPC-226ENST00000556628 C1orf61Q13536 156 aa7.73□□□□□ -1.17
HNRNPC-226ENST00000556628 DPYSQ14117 519 aa7.73□□□□□ -1.17
HNRNPC-226ENST00000556628 INPP5AQ14642 412 aa7.73□□□□□ -1.17
HNRNPC-226ENST00000556628 CDKN3Q16667 212 aa7.73□□□□□ -1.17
HNRNPC-226ENST00000556628 WSCD2Q2TBF2 565 aa7.73□□□□□ -1.17
HNRNPC-226ENST00000556628 ZFYVE27Q5T4F4 411 aa7.73□□□□□ -1.17
HNRNPC-226ENST00000556628 MARC1Q5VT66 337 aa7.73□□□□□ -1.17
HNRNPC-226ENST00000556628 AFMIDQ63HM1 303 aa7.73□□□□□ -1.17
HNRNPC-226ENST00000556628 HGSNATQ68CP4 663 aa7.73□□□□□ -1.17
HNRNPC-226ENST00000556628 ARHGAP36Q6ZRI8 547 aa7.73□□□□□ -1.17
HNRNPC-226ENST00000556628 CYP4V2Q6ZWL3 525 aaPredicted RBP7.73□□□□□ -1.17
HNRNPC-226ENST00000556628 EFL1Q7Z2Z2 1120 aaKnown RBP7.73□□□□□ -1.17
HNRNPC-226ENST00000556628 POLNQ7Z5Q5 900 aa7.73□□□□□ -1.17
HNRNPC-226ENST00000556628 GKN2Q86XP6 184 aa7.73□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms