RNA–Protein interactions for RNA: ENST00000556533.5

PSEN1-217, Transcript of presenilin 1, humanhuman

TSL 5

Gene PSEN1, Length 550 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-217ENST00000556533 HEXIM1O94992 359 aaKnown RBP17.13■□□□□ 0.33
PSEN1-217ENST00000556533 MT-CYBP00156 380 aaPredicted RBP17.13■□□□□ 0.33
PSEN1-217ENST00000556533 PRLP01236 227 aa17.13■□□□□ 0.33
PSEN1-217ENST00000556533 TRBC1P01850 177 aa17.13■□□□□ 0.33
PSEN1-217ENST00000556533 CD68P34810 354 aaPredicted RBP17.13■□□□□ 0.33
PSEN1-217ENST00000556533 IGFALSP35858 605 aa17.13■□□□□ 0.33
PSEN1-217ENST00000556533 RABIFP47224 123 aa17.13■□□□□ 0.33
PSEN1-217ENST00000556533 NOVA1P51513 510 aaKnown RBP17.13■□□□□ 0.33
PSEN1-217ENST00000556533 SLC14A1Q13336 389 aa17.13■□□□□ 0.33
PSEN1-217ENST00000556533 PDE1CQ14123 709 aaPredicted RBP17.13■□□□□ 0.33
PSEN1-217ENST00000556533 GALNT3Q14435 633 aa17.13■□□□□ 0.33
PSEN1-217ENST00000556533 SUZ12Q15022 739 aaKnown RBP17.13■□□□□ 0.33
PSEN1-217ENST00000556533 CNGA3Q16281 694 aa17.13■□□□□ 0.33
PSEN1-217ENST00000556533 CRTC1Q6UUV9 634 aa17.13■□□□□ 0.33
PSEN1-217ENST00000556533 KYAT3Q6YP21 454 aaKnown RBP17.13■□□□□ 0.33
PSEN1-217ENST00000556533 HSD11B1LQ7Z5J1 315 aa17.13■□□□□ 0.33
PSEN1-217ENST00000556533 GATAD2AQ86YP4 633 aa17.13■□□□□ 0.33
PSEN1-217ENST00000556533 TTC13Q8NBP0 860 aa17.13■□□□□ 0.33
PSEN1-217ENST00000556533 FAM174AQ8TBP5 190 aa17.13■□□□□ 0.33
PSEN1-217ENST00000556533 VAT1Q99536 393 aa17.13■□□□□ 0.33
PSEN1-217ENST00000556533 SLC32A1Q9H598 525 aa17.13■□□□□ 0.33
PSEN1-217ENST00000556533 ERVMER34-1Q9H9K5 563 aa17.13■□□□□ 0.33
PSEN1-217ENST00000556533 RSPH14Q9UHP6 348 aa17.13■□□□□ 0.33
PSEN1-217ENST00000556533 TRHDEQ9UKU6 1024 aa17.13■□□□□ 0.33
PSEN1-217ENST00000556533 R3HDM2Q9Y2K5 976 aaKnown RBP17.13■□□□□ 0.33
PSEN1-217ENST00000556533 GOLGA6CA6NDK9 693 aa17.12■□□□□ 0.33
PSEN1-217ENST00000556533 GOLGA6BA6NDN3 693 aa17.12■□□□□ 0.33
PSEN1-217ENST00000556533 SDC3O75056 442 aa17.12■□□□□ 0.33
PSEN1-217ENST00000556533 ITGAVP06756 1048 aa17.12■□□□□ 0.33
PSEN1-217ENST00000556533 ZNF883P0CG24 379 aa17.12■□□□□ 0.33
PSEN1-217ENST00000556533 GOLGA6DP0CG33 693 aa17.12■□□□□ 0.33
PSEN1-217ENST00000556533 LHCGRP22888 699 aa17.12■□□□□ 0.33
PSEN1-217ENST00000556533 THOP1P52888 689 aa17.12■□□□□ 0.33
PSEN1-217ENST00000556533 RPL26P61254 145 aaKnown RBP17.12■□□□□ 0.33
PSEN1-217ENST00000556533 BNIP3Q12983 259 aa17.12■□□□□ 0.33
PSEN1-217ENST00000556533 INPP5AQ14642 412 aa17.12■□□□□ 0.33
PSEN1-217ENST00000556533 QPCTQ16769 361 aa17.12■□□□□ 0.33
PSEN1-217ENST00000556533 PPM1JQ5JR12 505 aa17.12■□□□□ 0.33
PSEN1-217ENST00000556533 CCDC70Q6NSX1 233 aa17.12■□□□□ 0.33
PSEN1-217ENST00000556533 PSAPL1Q6NUJ1 521 aa17.12■□□□□ 0.33
PSEN1-217ENST00000556533 DCP2Q8IU60 420 aaKnown RBP17.12■□□□□ 0.33
PSEN1-217ENST00000556533 NAXDQ8IW45 347 aa17.12■□□□□ 0.33
PSEN1-217ENST00000556533 SLC22A18ASQ8N1D0 253 aa17.12■□□□□ 0.33
PSEN1-217ENST00000556533 PLA2G15Q8NCC3 412 aa17.12■□□□□ 0.33
PSEN1-217ENST00000556533 UBE2Q2Q8WVN8 375 aa17.12■□□□□ 0.33
PSEN1-217ENST00000556533 MCCC1Q96RQ3 725 aaPredicted RBP17.12■□□□□ 0.33
PSEN1-217ENST00000556533 MLPHQ9BV36 600 aaPredicted RBP17.12■□□□□ 0.33
PSEN1-217ENST00000556533 DNAJC28Q9NX36 388 aa17.12■□□□□ 0.33
PSEN1-217ENST00000556533 GOLGA6AQ9NYA3 693 aa17.12■□□□□ 0.33
PSEN1-217ENST00000556533 RPL26L1Q9UNX3 145 aaKnown RBP17.12■□□□□ 0.33
PSEN1-217ENST00000556533 PPIL1Q9Y3C6 166 aa17.12■□□□□ 0.33
PSEN1-217ENST00000556533 PLXNA2O75051 1894 aa17.12■□□□□ 0.33
PSEN1-217ENST00000556533 SHROOM3Q8TF72 1996 aa17.11■□□□□ 0.33
PSEN1-217ENST00000556533 PCDH15Q96QU1 1955 aa17.11■□□□□ 0.33
PSEN1-217ENST00000556533 ANKRD66B4E2M5 251 aa17.11■□□□□ 0.33
PSEN1-217ENST00000556533 GIPC1O14908 333 aa17.11■□□□□ 0.33
PSEN1-217ENST00000556533 KCNK5O95279 499 aa17.11■□□□□ 0.33
PSEN1-217ENST00000556533 ETV3P41162 512 aa17.11■□□□□ 0.33
PSEN1-217ENST00000556533 TNNT3P45378 269 aaPredicted RBP17.11■□□□□ 0.33
PSEN1-217ENST00000556533 PFN3P60673 137 aa17.11■□□□□ 0.33
PSEN1-217ENST00000556533 CDK18Q07002 472 aa17.11■□□□□ 0.33
PSEN1-217ENST00000556533 KLF1Q13351 362 aaPredicted RBP17.11■□□□□ 0.33
PSEN1-217ENST00000556533 SHBQ15464 509 aa17.11■□□□□ 0.33
PSEN1-217ENST00000556533 TPRG1LQ5T0D9 272 aa17.11■□□□□ 0.33
PSEN1-217ENST00000556533 LRRC66Q68CR7 880 aa17.11■□□□□ 0.33
PSEN1-217ENST00000556533 Q6ZVL8 140 aa17.11■□□□□ 0.33
PSEN1-217ENST00000556533 SLC13A5Q86YT5 568 aaPredicted RBP17.11■□□□□ 0.33
PSEN1-217ENST00000556533 REXO1L1PQ8IX06 675 aa17.11■□□□□ 0.33
PSEN1-217ENST00000556533 OXR1Q8N573 874 aa17.11■□□□□ 0.33
PSEN1-217ENST00000556533 FAM71DQ8N9W8 422 aa17.11■□□□□ 0.33
PSEN1-217ENST00000556533 RHBDD1Q8TEB9 315 aa17.11■□□□□ 0.33
PSEN1-217ENST00000556533 ATG4AQ8WYN0 398 aa17.11■□□□□ 0.33
PSEN1-217ENST00000556533 NUS1Q96E22 293 aa17.11■□□□□ 0.33
PSEN1-217ENST00000556533 COQ10AQ96MF6 247 aa17.11■□□□□ 0.33
PSEN1-217ENST00000556533 CAAP1Q9H8G2 361 aa17.11■□□□□ 0.33
PSEN1-217ENST00000556533 FAM153AQ9UHL3 310 aa17.11■□□□□ 0.33
PSEN1-217ENST00000556533 OR1A2Q9Y585 309 aa17.11■□□□□ 0.33
PSEN1-217ENST00000556533 PCDHGB2Q9Y5G2 931 aa17.11■□□□□ 0.33
PSEN1-217ENST00000556533 ADAMTS9Q9P2N4 1935 aa17.11■□□□□ 0.33
PSEN1-217ENST00000556533 C1orf232A0A0U1RR37 186 aa17.1■□□□□ 0.33
PSEN1-217ENST00000556533 SPTY2D1-AS1A0A0U1RR47 76 aa17.1■□□□□ 0.33
PSEN1-217ENST00000556533 CAPN8A6NHC0 703 aa17.1■□□□□ 0.33
PSEN1-217ENST00000556533 CLDN7O95471 211 aa17.1■□□□□ 0.33
PSEN1-217ENST00000556533 PIRTP0C851 137 aa17.1■□□□□ 0.33
PSEN1-217ENST00000556533 GM2AP17900 193 aa17.1■□□□□ 0.33
PSEN1-217ENST00000556533 CSRP1P21291 193 aaKnown RBP17.1■□□□□ 0.33
PSEN1-217ENST00000556533 CXCR5P32302 372 aa17.1■□□□□ 0.33
PSEN1-217ENST00000556533 WNT3AP56704 352 aa17.1■□□□□ 0.33
PSEN1-217ENST00000556533 PTK2BQ14289 1009 aa17.1■□□□□ 0.33
PSEN1-217ENST00000556533 FZD2Q14332 565 aa17.1■□□□□ 0.33
PSEN1-217ENST00000556533 ZNF569Q5MCW4 686 aa17.1■□□□□ 0.33
PSEN1-217ENST00000556533 ANKRD20A2Q5SQ80 823 aa17.1■□□□□ 0.33
PSEN1-217ENST00000556533 ANKRD20A1Q5TYW2 823 aa17.1■□□□□ 0.33
PSEN1-217ENST00000556533 ANKRD20A3Q5VUR7 823 aa17.1■□□□□ 0.33
PSEN1-217ENST00000556533 ITPRIPL1Q6GPH6 555 aa17.1■□□□□ 0.33
PSEN1-217ENST00000556533 RFLNAQ6ZTI6 216 aa17.1■□□□□ 0.33
PSEN1-217ENST00000556533 PIP4P1Q86T03 277 aa17.1■□□□□ 0.33
PSEN1-217ENST00000556533 SLC25A41Q8N5S1 370 aa17.1■□□□□ 0.33
PSEN1-217ENST00000556533 IPMKQ8NFU5 416 aa17.1■□□□□ 0.33
PSEN1-217ENST00000556533 CCDC110Q8TBZ0 833 aa17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms