RNA–Protein interactions for RNA: ENST00000556432.1

ACTN1-219, Transcript of actinin alpha 1, humanhuman

TSL 1 (best)

Gene ACTN1, Length 558 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-219ENST00000556432 MC1RQ01726 317 aa13.98□□□□□ -0.17
ACTN1-219ENST00000556432 EXOC3L4Q17RC7 722 aa13.98□□□□□ -0.17
ACTN1-219ENST00000556432 FHL5Q5TD97 284 aa13.98□□□□□ -0.17
ACTN1-219ENST00000556432 ANKS6Q68DC2 871 aa13.98□□□□□ -0.17
ACTN1-219ENST00000556432 TRNP1Q6NT89 227 aa13.98□□□□□ -0.17
ACTN1-219ENST00000556432 SLC30A9Q6PML9 568 aa13.98□□□□□ -0.17
ACTN1-219ENST00000556432 ZNF438Q7Z4V0 828 aa13.98□□□□□ -0.17
ACTN1-219ENST00000556432 PHLDB2Q86SQ0 1253 aa13.98□□□□□ -0.17
ACTN1-219ENST00000556432 NLGN4XQ8N0W4 816 aa13.98□□□□□ -0.17
ACTN1-219ENST00000556432 MSANTD4Q8NCY6 345 aa13.98□□□□□ -0.17
ACTN1-219ENST00000556432 NLGN4YQ8NFZ3 816 aaPredicted RBP13.98□□□□□ -0.17
ACTN1-219ENST00000556432 GSDMCQ9BYG8 508 aa13.98□□□□□ -0.17
ACTN1-219ENST00000556432 SUV39H2Q9H5I1 410 aa13.98□□□□□ -0.17
ACTN1-219ENST00000556432 OCIAD1Q9NX40 245 aa13.98□□□□□ -0.17
ACTN1-219ENST00000556432 TAAR2Q9P1P5 351 aa13.98□□□□□ -0.17
ACTN1-219ENST00000556432 VPS4AQ9UN37 437 aa13.98□□□□□ -0.17
ACTN1-219ENST00000556432 ARHGEF17Q96PE2 2063 aaPredicted RBP13.98□□□□□ -0.17
ACTN1-219ENST00000556432 CENPEQ02224 2701 aa13.97□□□□□ -0.17
ACTN1-219ENST00000556432 FAM72CH0Y354 149 aa13.97□□□□□ -0.17
ACTN1-219ENST00000556432 LRIG2O94898 1065 aa13.97□□□□□ -0.17
ACTN1-219ENST00000556432 FGFR1OPO95684 399 aaKnown RBP13.97□□□□□ -0.17
ACTN1-219ENST00000556432 ELFN1P0C7U0 828 aa13.97□□□□□ -0.17
ACTN1-219ENST00000556432 THRAP10827 490 aa13.97□□□□□ -0.17
ACTN1-219ENST00000556432 CCNB1P14635 433 aa13.97□□□□□ -0.17
ACTN1-219ENST00000556432 TCN2P20062 427 aa13.97□□□□□ -0.17
ACTN1-219ENST00000556432 MAP4P27816 1152 aaKnown RBP13.97□□□□□ -0.17
ACTN1-219ENST00000556432 ADRA1BP35368 520 aa13.97□□□□□ -0.17
ACTN1-219ENST00000556432 CLCN1P35523 988 aa13.97□□□□□ -0.17
ACTN1-219ENST00000556432 GPR3P46089 330 aa13.97□□□□□ -0.17
ACTN1-219ENST00000556432 GABRB2P47870 512 aa13.97□□□□□ -0.17
ACTN1-219ENST00000556432 UQCRFS1P47985 274 aa13.97□□□□□ -0.17
ACTN1-219ENST00000556432 CD97P48960 835 aa13.97□□□□□ -0.17
ACTN1-219ENST00000556432 PAK1Q13153 545 aa13.97□□□□□ -0.17
ACTN1-219ENST00000556432 AGERQ15109 404 aa13.97□□□□□ -0.17
ACTN1-219ENST00000556432 SNAP47Q5SQN1 464 aa13.97□□□□□ -0.17
ACTN1-219ENST00000556432 ATP1A1-AS1Q5TC04 95 aa13.97□□□□□ -0.17
ACTN1-219ENST00000556432 FAM72AQ5TYM5 149 aa13.97□□□□□ -0.17
ACTN1-219ENST00000556432 MANEALQ5VSG8 457 aa13.97□□□□□ -0.17
ACTN1-219ENST00000556432 TAF3Q5VWG9 929 aa13.97□□□□□ -0.17
ACTN1-219ENST00000556432 FAM72DQ6L9T8 149 aa13.97□□□□□ -0.17
ACTN1-219ENST00000556432 BRAT1Q6PJG6 821 aa13.97□□□□□ -0.17
ACTN1-219ENST00000556432 FAM72BQ86X60 149 aa13.97□□□□□ -0.17
ACTN1-219ENST00000556432 DNAAF5Q86Y56 855 aa13.97□□□□□ -0.17
ACTN1-219ENST00000556432 EMC1Q8N766 993 aa13.97□□□□□ -0.17
ACTN1-219ENST00000556432 EFCAB3Q8N7B9 438 aa13.97□□□□□ -0.17
ACTN1-219ENST00000556432 STARD8Q92502 1023 aa13.97□□□□□ -0.17
ACTN1-219ENST00000556432 CTRCQ99895 268 aa13.97□□□□□ -0.17
ACTN1-219ENST00000556432 LGR4Q9BXB1 951 aa13.97□□□□□ -0.17
ACTN1-219ENST00000556432 RETREG1Q9H6L5 497 aa13.97□□□□□ -0.17
ACTN1-219ENST00000556432 METTL5Q9NRN9 209 aaKnown RBP13.97□□□□□ -0.17
ACTN1-219ENST00000556432 PILRAQ9UKJ1 303 aa13.97□□□□□ -0.17
ACTN1-219ENST00000556432 ZDHHC9Q9Y397 364 aa13.97□□□□□ -0.17
ACTN1-219ENST00000556432 NBPF19A0A087WUL8 3843 aa13.97□□□□□ -0.17
ACTN1-219ENST00000556432 LOC101059948A0A1B0GTJ6 334 aa13.96□□□□□ -0.17
ACTN1-219ENST00000556432 TSPAN11A1L157 253 aa13.96□□□□□ -0.17
ACTN1-219ENST00000556432 A1L4Q6 167 aa13.96□□□□□ -0.17
ACTN1-219ENST00000556432 B4E171 279 aa13.96□□□□□ -0.17
ACTN1-219ENST00000556432 PPP1R3GB7ZBB8 358 aa13.96□□□□□ -0.17
ACTN1-219ENST00000556432 MKRN2OSH3BPM6 223 aa13.96□□□□□ -0.17
ACTN1-219ENST00000556432 PDE2AO00408 941 aaPredicted RBP13.96□□□□□ -0.17
ACTN1-219ENST00000556432 FOXN3O00409 490 aaPredicted RBP13.96□□□□□ -0.17
ACTN1-219ENST00000556432 FGF1P05230 155 aa13.96□□□□□ -0.17
ACTN1-219ENST00000556432 PLEKP08567 350 aaPredicted RBP13.96□□□□□ -0.17
ACTN1-219ENST00000556432 CSF2RBP32927 897 aa13.96□□□□□ -0.17
ACTN1-219ENST00000556432 MAN1A1P33908 653 aa13.96□□□□□ -0.17
ACTN1-219ENST00000556432 TSPAN7P41732 249 aa13.96□□□□□ -0.17
ACTN1-219ENST00000556432 STAT1P42224 750 aa13.96□□□□□ -0.17
ACTN1-219ENST00000556432 GNPDA1P46926 289 aa13.96□□□□□ -0.17
ACTN1-219ENST00000556432 BPIFB4P59827 614 aa13.96□□□□□ -0.17
ACTN1-219ENST00000556432 NRG1Q02297 640 aaPredicted RBP13.96□□□□□ -0.17
ACTN1-219ENST00000556432 GRM3Q14832 879 aa13.96□□□□□ -0.17
ACTN1-219ENST00000556432 NR1D2Q14995 579 aa13.96□□□□□ -0.17
ACTN1-219ENST00000556432 ACOX1Q15067 660 aa13.96□□□□□ -0.17
ACTN1-219ENST00000556432 RAB6CQ53S08 254 aa13.96□□□□□ -0.17
ACTN1-219ENST00000556432 INO80DQ53TQ3 878 aaPredicted RBP13.96□□□□□ -0.17
ACTN1-219ENST00000556432 HEATR4Q86WZ0 1026 aa13.96□□□□□ -0.17
ACTN1-219ENST00000556432 CAMK1DQ8IU85 385 aa13.96□□□□□ -0.17
ACTN1-219ENST00000556432 HCAR2Q8TDS4 363 aa13.96□□□□□ -0.17
ACTN1-219ENST00000556432 PATE1Q8WXA2 126 aa13.96□□□□□ -0.17
ACTN1-219ENST00000556432 AHCYL2Q96HN2 611 aaKnown RBP13.96□□□□□ -0.17
ACTN1-219ENST00000556432 TEFMQ96QE5 360 aaKnown RBP13.96□□□□□ -0.17
ACTN1-219ENST00000556432 DPYSL5Q9BPU6 564 aa13.96□□□□□ -0.17
ACTN1-219ENST00000556432 KLC2Q9H0B6 622 aa13.96□□□□□ -0.17
ACTN1-219ENST00000556432 RAB6CQ9H0N0 254 aa13.96□□□□□ -0.17
ACTN1-219ENST00000556432 TMEM9Q9P0T7 183 aa13.96□□□□□ -0.17
ACTN1-219ENST00000556432 LHX3Q9UBR4 397 aa13.96□□□□□ -0.17
ACTN1-219ENST00000556432 DNAJC12Q9UKB3 198 aa13.96□□□□□ -0.17
ACTN1-219ENST00000556432 AJAP1Q9UKB5 411 aaPredicted RBP13.96□□□□□ -0.17
ACTN1-219ENST00000556432 ITPR2Q14571 2701 aa13.96□□□□□ -0.18
ACTN1-219ENST00000556432 IGHV1OR21-1A0A087WYE8 117 aa13.95□□□□□ -0.18
ACTN1-219ENST00000556432 A8MU76 341 aa13.95□□□□□ -0.18
ACTN1-219ENST00000556432 A8MX80 341 aa13.95□□□□□ -0.18
ACTN1-219ENST00000556432 BIN1O00499 593 aa13.95□□□□□ -0.18
ACTN1-219ENST00000556432 GNLYP22749 145 aa13.95□□□□□ -0.18
ACTN1-219ENST00000556432 AK4P27144 223 aaPredicted RBP13.95□□□□□ -0.18
ACTN1-219ENST00000556432 PON1P27169 355 aa13.95□□□□□ -0.18
ACTN1-219ENST00000556432 SDC4P31431 198 aa13.95□□□□□ -0.18
ACTN1-219ENST00000556432 C15orf59Q2T9L4 293 aaPredicted RBP13.95□□□□□ -0.18
ACTN1-219ENST00000556432 ASB18Q6ZVZ8 466 aa13.95□□□□□ -0.18
ACTN1-219ENST00000556432 BNIPLQ7Z465 357 aa13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms