RNA–Protein interactions for RNA: ENST00000556399.5

ARHGEF40-207, Transcript of Rho guanine nucleotide exchange factor 40, humanhuman

TSL 1 (best)

Gene ARHGEF40, Length 4,902 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF40-207ENST00000556399 SYTL1Q8IYJ3 562 aa15.06■□□□□ 0
ARHGEF40-207ENST00000556399 PTCD2Q8WV60 388 aaKnown RBP15.06■□□□□ 0
ARHGEF40-207ENST00000556399 TRNAU1APQ9NX07 287 aaKnown RBP15.06■□□□□ 0
ARHGEF40-207ENST00000556399 TEKT2Q9UIF3 430 aa15.06■□□□□ 0
ARHGEF40-207ENST00000556399 MAGEL2Q9UJ55 1249 aa15.06■□□□□ 0
ARHGEF40-207ENST00000556399 TNPO3Q9Y5L0 923 aaKnown RBP15.06■□□□□ 0
ARHGEF40-207ENST00000556399 SNX10Q9Y5X0 201 aa15.06■□□□□ 0
ARHGEF40-207ENST00000556399 NRCAMQ92823 1304 aa15.06■□□□□ 0
ARHGEF40-207ENST00000556399 PDZK1P1A8MUH7 402 aa15.06■□□□□ 0
ARHGEF40-207ENST00000556399 ADM5C9JUS6 153 aa15.06■□□□□ 0
ARHGEF40-207ENST00000556399 WNT7BP56706 349 aa15.06■□□□□ 0
ARHGEF40-207ENST00000556399 CDH18Q13634 790 aa15.06■□□□□ 0
ARHGEF40-207ENST00000556399 ARHGAP17Q68EM7 881 aa15.06■□□□□ 0
ARHGEF40-207ENST00000556399 TPD52L3Q96J77 140 aa15.06■□□□□ 0
ARHGEF40-207ENST00000556399 TLR8Q9NR97 1041 aaKnown RBP15.06■□□□□ 0
ARHGEF40-207ENST00000556399 GIMAP4Q9NUV9 329 aa15.06■□□□□ 0
ARHGEF40-207ENST00000556399 KLQ9UEF7 1012 aa15.06■□□□□ 0
ARHGEF40-207ENST00000556399 TMEM233B4DJY2 109 aa15.05■□□□□ 0
ARHGEF40-207ENST00000556399 HALP42357 657 aa15.05■□□□□ 0
ARHGEF40-207ENST00000556399 CDH15P55291 814 aa15.05■□□□□ 0
ARHGEF40-207ENST00000556399 LIPEQ05469 1076 aa15.05■□□□□ 0
ARHGEF40-207ENST00000556399 OLIG2Q13516 323 aa15.05■□□□□ 0
ARHGEF40-207ENST00000556399 SLC39A12Q504Y0 691 aa15.05■□□□□ 0
ARHGEF40-207ENST00000556399 GALNT18Q6P9A2 607 aa15.05■□□□□ 0
ARHGEF40-207ENST00000556399 SPPL2AQ8TCT8 520 aa15.05■□□□□ 0
ARHGEF40-207ENST00000556399 ATP13A1Q9HD20 1204 aa15.05■□□□□ 0
ARHGEF40-207ENST00000556399 MKS1Q9NXB0 559 aa15.05■□□□□ 0
ARHGEF40-207ENST00000556399 SFMBT1Q9UHJ3 866 aa15.05■□□□□ 0
ARHGEF40-207ENST00000556399 PNMA8BQ9ULN7 279 aaPredicted RBP15.05■□□□□ 0
ARHGEF40-207ENST00000556399 UBR2Q8IWV8 1755 aa15.05■□□□□ 0
ARHGEF40-207ENST00000556399 IQCA1LA6NCM1 817 aa15.05■□□□□ 0
ARHGEF40-207ENST00000556399 PAGE1O75459 146 aa15.05■□□□□ 0
ARHGEF40-207ENST00000556399 ALDOAP04075 364 aaKnown RBP15.05■□□□□ 0
ARHGEF40-207ENST00000556399 PABPC4LP0CB38 370 aaKnown RBP15.05■□□□□ 0
ARHGEF40-207ENST00000556399 ZNF7P17097 686 aaPredicted RBP15.05■□□□□ 0
ARHGEF40-207ENST00000556399 NNMTP40261 264 aa15.05■□□□□ 0
ARHGEF40-207ENST00000556399 TRAP1Q12931 704 aaKnown RBP15.05■□□□□ 0
ARHGEF40-207ENST00000556399 CBX3Q13185 183 aa15.05■□□□□ 0
ARHGEF40-207ENST00000556399 CACNA1SQ13698 1873 aa15.05■□□□□ 0
ARHGEF40-207ENST00000556399 ACAP2Q15057 778 aa15.05■□□□□ 0
ARHGEF40-207ENST00000556399 GLYATQ6IB77 296 aa15.05■□□□□ 0
ARHGEF40-207ENST00000556399 PARP8Q8N3A8 854 aa15.05■□□□□ 0
ARHGEF40-207ENST00000556399 HM13Q8TCT9 377 aa15.05■□□□□ 0
ARHGEF40-207ENST00000556399 SH3KBP1Q96B97 665 aa15.05■□□□□ 0
ARHGEF40-207ENST00000556399 OTULINQ96BN8 352 aa15.05■□□□□ 0
ARHGEF40-207ENST00000556399 TEKT5Q96M29 485 aa15.05■□□□□ 0
ARHGEF40-207ENST00000556399 ALG2Q9H553 416 aa15.05■□□□□ 0
ARHGEF40-207ENST00000556399 OPTCQ9UBM4 332 aa15.05■□□□□ 0
ARHGEF40-207ENST00000556399 MFHAS1Q9Y4C4 1052 aa15.05■□□□□ 0
ARHGEF40-207ENST00000556399 PLCH1Q4KWH8 1693 aa15.05■□□□□ -0
ARHGEF40-207ENST00000556399 KLHL33A6NCF5 533 aa15.05■□□□□ -0
ARHGEF40-207ENST00000556399 G3V2T6 193 aa15.05■□□□□ -0
ARHGEF40-207ENST00000556399 FAM189A1O60320 539 aa15.05■□□□□ -0
ARHGEF40-207ENST00000556399 DNAJA2O60884 412 aa15.05■□□□□ -0
ARHGEF40-207ENST00000556399 GPIP06744 558 aa15.05■□□□□ -0
ARHGEF40-207ENST00000556399 ETV4P43268 484 aa15.05■□□□□ -0
ARHGEF40-207ENST00000556399 PSEN2P49810 448 aa15.05■□□□□ -0
ARHGEF40-207ENST00000556399 LDLRAP1Q5SW96 308 aa15.05■□□□□ -0
ARHGEF40-207ENST00000556399 TMC5Q6UXY8 1006 aa15.05■□□□□ -0
ARHGEF40-207ENST00000556399 EGFL6Q8IUX8 553 aa15.05■□□□□ -0
ARHGEF40-207ENST00000556399 LGI2Q8N0V4 545 aa15.05■□□□□ -0
ARHGEF40-207ENST00000556399 FANCEQ9HB96 536 aa15.05■□□□□ -0
ARHGEF40-207ENST00000556399 ADARB2Q9NS39 739 aaKnown RBP15.05■□□□□ -0
ARHGEF40-207ENST00000556399 ZBTB11O95625 1053 aaPredicted RBP15.05■□□□□ -0
ARHGEF40-207ENST00000556399 SMIM10L2AP0DMW4 78 aa15.05■□□□□ -0
ARHGEF40-207ENST00000556399 SMIM10L2BP0DMW5 78 aa15.05■□□□□ -0
ARHGEF40-207ENST00000556399 ATP6V0D1P61421 351 aa15.05■□□□□ -0
ARHGEF40-207ENST00000556399 RPL38P63173 70 aaKnown RBP15.05■□□□□ -0
ARHGEF40-207ENST00000556399 SPIDRQ14159 915 aa15.05■□□□□ -0
ARHGEF40-207ENST00000556399 ARMCX4Q5H9R4 360 aa15.05■□□□□ -0
ARHGEF40-207ENST00000556399 RAP1GAP2Q684P5 730 aa15.05■□□□□ -0
ARHGEF40-207ENST00000556399 KCTD8Q6ZWB6 473 aa15.05■□□□□ -0
ARHGEF40-207ENST00000556399 RALGPS2Q86X27 583 aaPredicted RBP15.05■□□□□ -0
ARHGEF40-207ENST00000556399 S100ZQ8WXG8 99 aa15.05■□□□□ -0
ARHGEF40-207ENST00000556399 ZYG11BQ9C0D3 744 aa15.05■□□□□ -0
ARHGEF40-207ENST00000556399 RERGLQ9H628 205 aa15.05■□□□□ -0
ARHGEF40-207ENST00000556399 ABCB10Q9NRK6 738 aa15.05■□□□□ -0
ARHGEF40-207ENST00000556399 DNAAF2Q9NVR5 837 aaKnown RBP15.05■□□□□ -0
ARHGEF40-207ENST00000556399 CYTH4Q9UIA0 394 aa15.05■□□□□ -0
ARHGEF40-207ENST00000556399 SIX4Q9UIU6 781 aa15.05■□□□□ -0
ARHGEF40-207ENST00000556399 TIMM22Q9Y584 194 aa15.05■□□□□ -0
ARHGEF40-207ENST00000556399 DHRS4L1P0CG22 281 aa15.04■□□□□ -0
ARHGEF40-207ENST00000556399 SLC1A2P43004 574 aa15.04■□□□□ -0
ARHGEF40-207ENST00000556399 HPCAP84074 193 aa15.04■□□□□ -0
ARHGEF40-207ENST00000556399 PCBP1Q15365 356 aaKnown RBP eCLIP15.04■□□□□ -04e-6■■■■□ 25.2
ARHGEF40-207ENST00000556399 TLK2Q86UE8 772 aa15.04■□□□□ -0
ARHGEF40-207ENST00000556399 PSMA8Q8TAA3 256 aa15.04■□□□□ -0
ARHGEF40-207ENST00000556399 ZFYVE19Q96K21 471 aa15.04■□□□□ -0
ARHGEF40-207ENST00000556399 PPM1MQ96MI6 270 aa15.04■□□□□ -0
ARHGEF40-207ENST00000556399 MINDY3Q9H8M7 445 aa15.04■□□□□ -0
ARHGEF40-207ENST00000556399 ZFP14Q9HCL3 533 aa15.04■□□□□ -0
ARHGEF40-207ENST00000556399 VPS28Q9UK41 221 aa15.04■□□□□ -0
ARHGEF40-207ENST00000556399 LSM7Q9UK45 103 aaKnown RBP15.04■□□□□ -0
ARHGEF40-207ENST00000556399 E7ENX8 843 aa15.04■□□□□ -0
ARHGEF40-207ENST00000556399 ATP6V1G1O75348 118 aa15.04■□□□□ -0
ARHGEF40-207ENST00000556399 BCAS2O75934 225 aaPredicted RBP15.04■□□□□ -0
ARHGEF40-207ENST00000556399 MZF1P28698 734 aaPredicted RBP15.04■□□□□ -0
ARHGEF40-207ENST00000556399 GALNT3Q14435 633 aa15.04■□□□□ -0
ARHGEF40-207ENST00000556399 KIAA0408Q6ZU52 694 aa15.04■□□□□ -0
ARHGEF40-207ENST00000556399 PLD6Q8N2A8 252 aaKnown RBP15.04■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms