RNA–Protein interactions for RNA: ENST00000556315.5

ATXN3-239, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 924 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-239ENST00000556315 STX6O43752 255 aa4.99□□□□□ -1.61
ATXN3-239ENST00000556315 RPN1P04843 607 aaKnown RBP4.99□□□□□ -1.61
ATXN3-239ENST00000556315 TBC1D3HP0C7X1 549 aa4.99□□□□□ -1.61
ATXN3-239ENST00000556315 CPEP16870 476 aa4.99□□□□□ -1.61
ATXN3-239ENST00000556315 ITGB6P18564 788 aa4.99□□□□□ -1.61
ATXN3-239ENST00000556315 HOXD9P28356 352 aaPredicted RBP4.99□□□□□ -1.61
ATXN3-239ENST00000556315 ADORA2BP29275 332 aa4.99□□□□□ -1.61
ATXN3-239ENST00000556315 SCNN1BP51168 640 aa4.99□□□□□ -1.61
ATXN3-239ENST00000556315 NDST1P52848 882 aa4.99□□□□□ -1.61
ATXN3-239ENST00000556315 CYP24A1Q07973 514 aa4.99□□□□□ -1.61
ATXN3-239ENST00000556315 CST6Q15828 149 aa4.99□□□□□ -1.61
ATXN3-239ENST00000556315 ISXQ2M1V0 245 aa4.99□□□□□ -1.61
ATXN3-239ENST00000556315 SGSM1Q2NKQ1 1148 aa4.99□□□□□ -1.61
ATXN3-239ENST00000556315 ZNF699Q32M78 642 aa4.99□□□□□ -1.61
ATXN3-239ENST00000556315 HNRNPA1L2Q32P51 320 aaKnown RBP4.99□□□□□ -1.61
ATXN3-239ENST00000556315 LINC00303Q3SY05 128 aa4.99□□□□□ -1.61
ATXN3-239ENST00000556315 TBC1D3GQ6DHY5 549 aa4.99□□□□□ -1.61
ATXN3-239ENST00000556315 TBC1D3CQ6IPX1 549 aa4.99□□□□□ -1.61
ATXN3-239ENST00000556315 NAPEPLDQ6IQ20 393 aa4.99□□□□□ -1.61
ATXN3-239ENST00000556315 CLEC20AQ6ZU45 233 aa4.99□□□□□ -1.61
ATXN3-239ENST00000556315 RSRC2Q7L4I2 434 aaKnown RBP4.99□□□□□ -1.61
ATXN3-239ENST00000556315 GPRIN1Q7Z2K8 1008 aa4.99□□□□□ -1.61
ATXN3-239ENST00000556315 ZC3H18Q86VM9 953 aaKnown RBP4.99□□□□□ -1.61
ATXN3-239ENST00000556315 SPATS2Q86XZ4 545 aaKnown RBP4.99□□□□□ -1.61
ATXN3-239ENST00000556315 PTRH1Q86Y79 214 aaKnown RBP4.99□□□□□ -1.61
ATXN3-239ENST00000556315 MMAAQ8IVH4 418 aaKnown RBP4.99□□□□□ -1.61
ATXN3-239ENST00000556315 CCDC65Q8IXS2 484 aa4.99□□□□□ -1.61
ATXN3-239ENST00000556315 TBC1D3Q8IZP1 549 aaPredicted RBP4.99□□□□□ -1.61
ATXN3-239ENST00000556315 ARL14Q8N4G2 192 aa4.99□□□□□ -1.61
ATXN3-239ENST00000556315 ZNF557Q8N988 423 aaPredicted RBP4.99□□□□□ -1.61
ATXN3-239ENST00000556315 C12orf29Q8N999 325 aa4.99□□□□□ -1.61
ATXN3-239ENST00000556315 KDM1BQ8NB78 822 aa4.99□□□□□ -1.61
ATXN3-239ENST00000556315 XXYLT1Q8NBI6 393 aa4.99□□□□□ -1.61
ATXN3-239ENST00000556315 OR4C6Q8NH72 309 aa4.99□□□□□ -1.61
ATXN3-239ENST00000556315 OR14C36Q8NHC7 312 aa4.99□□□□□ -1.61
ATXN3-239ENST00000556315 HPS3Q969F9 1004 aa4.99□□□□□ -1.61
ATXN3-239ENST00000556315 TTC17Q96AE7 1141 aa4.99□□□□□ -1.61
ATXN3-239ENST00000556315 CYFIP2Q96F07 1278 aa4.99□□□□□ -1.61
ATXN3-239ENST00000556315 EPSTI1Q96J88 318 aa4.99□□□□□ -1.61
ATXN3-239ENST00000556315 CCNL2Q96S94 520 aaPredicted RBP4.99□□□□□ -1.61
ATXN3-239ENST00000556315 DUSP16Q9BY84 665 aa4.99□□□□□ -1.61
ATXN3-239ENST00000556315 FGFBP2Q9BYJ0 223 aa4.99□□□□□ -1.61
ATXN3-239ENST00000556315 UBXN6Q9BZV1 441 aa4.99□□□□□ -1.61
ATXN3-239ENST00000556315 CD244Q9BZW8 370 aa4.99□□□□□ -1.61
ATXN3-239ENST00000556315 DNAI2Q9GZS0 605 aa4.99□□□□□ -1.61
ATXN3-239ENST00000556315 SDCBP2Q9H190 292 aa4.99□□□□□ -1.61
ATXN3-239ENST00000556315 SMYD3Q9H7B4 428 aa4.99□□□□□ -1.61
ATXN3-239ENST00000556315 ABCB8Q9NUT2 735 aa4.99□□□□□ -1.61
ATXN3-239ENST00000556315 KLHL11Q9NVR0 708 aa4.99□□□□□ -1.61
ATXN3-239ENST00000556315 DTLQ9NZJ0 730 aa4.99□□□□□ -1.61
ATXN3-239ENST00000556315 SERGEFQ9UGK8 458 aa4.99□□□□□ -1.61
ATXN3-239ENST00000556315 GGA2Q9UJY4 613 aa4.99□□□□□ -1.61
ATXN3-239ENST00000556315 STOML2Q9UJZ1 356 aa4.99□□□□□ -1.61
ATXN3-239ENST00000556315 DMTF1Q9Y222 760 aa4.99□□□□□ -1.61
ATXN3-239ENST00000556315 PCDHGA8Q9Y5G5 932 aa4.99□□□□□ -1.61
ATXN3-239ENST00000556315 HELZP42694 1942 aaKnown RBP4.99□□□□□ -1.61
ATXN3-239ENST00000556315 MYO18AQ92614 2054 aaKnown RBP4.98□□□□□ -1.61
ATXN3-239ENST00000556315 COL6A6A6NMZ7 2263 aa4.98□□□□□ -1.61
ATXN3-239ENST00000556315 KIAA1549LQ6ZVL6 1849 aa4.98□□□□□ -1.61
ATXN3-239ENST00000556315 A0A1B0GVM2 712 aa4.98□□□□□ -1.61
ATXN3-239ENST00000556315 NEMP2A6NFY4 417 aa4.98□□□□□ -1.61
ATXN3-239ENST00000556315 CDRT15L2A8MXV6 281 aa4.98□□□□□ -1.61
ATXN3-239ENST00000556315 PRAMEF26H0Y7S4 382 aa4.98□□□□□ -1.61
ATXN3-239ENST00000556315 TGFB1I1O43294 461 aa4.98□□□□□ -1.61
ATXN3-239ENST00000556315 LATO43561 262 aa4.98□□□□□ -1.61
ATXN3-239ENST00000556315 SDC3O75056 442 aa4.98□□□□□ -1.61
ATXN3-239ENST00000556315 LATS1O95835 1130 aa4.98□□□□□ -1.61
ATXN3-239ENST00000556315 C4BPAP04003 597 aaKnown RBP4.98□□□□□ -1.61
ATXN3-239ENST00000556315 ALPPL2P10696 532 aa4.98□□□□□ -1.61
ATXN3-239ENST00000556315 MYF5P13349 255 aa4.98□□□□□ -1.61
ATXN3-239ENST00000556315 CR2P20023 1033 aa4.98□□□□□ -1.61
ATXN3-239ENST00000556315 C5AR1P21730 350 aa4.98□□□□□ -1.61
ATXN3-239ENST00000556315 DGKAP23743 735 aa4.98□□□□□ -1.61
ATXN3-239ENST00000556315 HOXD13P35453 343 aa4.98□□□□□ -1.61
ATXN3-239ENST00000556315 IRF9Q00978 393 aa4.98□□□□□ -1.61
ATXN3-239ENST00000556315 OCRLQ01968 901 aa4.98□□□□□ -1.61
ATXN3-239ENST00000556315 BIRC3Q13489 604 aa4.98□□□□□ -1.61
ATXN3-239ENST00000556315 ZSCAN23Q3MJ62 389 aa4.98□□□□□ -1.61
ATXN3-239ENST00000556315 MPP7Q5T2T1 576 aa4.98□□□□□ -1.61
ATXN3-239ENST00000556315 C9orf64Q5T6V5 341 aa4.98□□□□□ -1.61
ATXN3-239ENST00000556315 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP4.98□□□□□ -1.61
ATXN3-239ENST00000556315 CCDC73Q6ZRK6 1079 aa4.98□□□□□ -1.61
ATXN3-239ENST00000556315 ZNF761Q86XN6 746 aaPredicted RBP4.98□□□□□ -1.61
ATXN3-239ENST00000556315 ZC3H3Q8IXZ2 948 aaKnown RBP4.98□□□□□ -1.61
ATXN3-239ENST00000556315 LINC00482Q8N8I6 264 aa4.98□□□□□ -1.61
ATXN3-239ENST00000556315 MAPK15Q8TD08 544 aa4.98□□□□□ -1.61
ATXN3-239ENST00000556315 TAF4BQ92750 862 aa4.98□□□□□ -1.61
ATXN3-239ENST00000556315 JAKMIP2Q96AA8 810 aa4.98□□□□□ -1.61
ATXN3-239ENST00000556315 SGF29Q96ES7 293 aa4.98□□□□□ -1.61
ATXN3-239ENST00000556315 PRR11Q96HE9 360 aaPredicted RBP4.98□□□□□ -1.61
ATXN3-239ENST00000556315 APOLD1Q96LR9 279 aa4.98□□□□□ -1.61
ATXN3-239ENST00000556315 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP4.98□□□□□ -1.61
ATXN3-239ENST00000556315 LRRC27Q9C0I9 530 aa4.98□□□□□ -1.61
ATXN3-239ENST00000556315 MTG2Q9H4K7 406 aa4.98□□□□□ -1.61
ATXN3-239ENST00000556315 PCDH18Q9HCL0 1135 aa4.98□□□□□ -1.61
ATXN3-239ENST00000556315 AGPAT3Q9NRZ7 376 aa4.98□□□□□ -1.61
ATXN3-239ENST00000556315 FAM49BQ9NUQ9 324 aa4.98□□□□□ -1.61
ATXN3-239ENST00000556315 RIC8BQ9NVN3 520 aa4.98□□□□□ -1.61
ATXN3-239ENST00000556315 NTMQ9P121 344 aa4.98□□□□□ -1.61
ATXN3-239ENST00000556315 ARHGAP20Q9P2F6 1191 aa4.98□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms