RNA–Protein interactions for RNA: ENST00000556066.1

PSEN1-216, Transcript of presenilin 1, humanhuman

TSL 3

Gene PSEN1, Length 612 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-216ENST00000556066 ADKP55263 362 aaKnown RBP6.75□□□□□ -1.33
PSEN1-216ENST00000556066 PFN3P60673 137 aa6.75□□□□□ -1.33
PSEN1-216ENST00000556066 GABREP78334 506 aa6.75□□□□□ -1.33
PSEN1-216ENST00000556066 PPARDQ03181 441 aa6.75□□□□□ -1.33
PSEN1-216ENST00000556066 ELP6Q0PNE2 266 aa6.75□□□□□ -1.33
PSEN1-216ENST00000556066 LRRC14Q15048 493 aa6.75□□□□□ -1.33
PSEN1-216ENST00000556066 IRF4Q15306 451 aa6.75□□□□□ -1.33
PSEN1-216ENST00000556066 CA9Q16790 459 aa6.75□□□□□ -1.33
PSEN1-216ENST00000556066 ZNF800Q2TB10 664 aaPredicted RBP eCLIP6.75□□□□□ -1.33
PSEN1-216ENST00000556066 ERMARDQ5T6L9 678 aa6.75□□□□□ -1.33
PSEN1-216ENST00000556066 PPP1R2P3Q6NXS1 205 aa6.75□□□□□ -1.33
PSEN1-216ENST00000556066 ERAP2Q6P179 960 aa6.75□□□□□ -1.33
PSEN1-216ENST00000556066 GUSBP11Q6P575 273 aa6.75□□□□□ -1.33
PSEN1-216ENST00000556066 EFL1Q7Z2Z2 1120 aaKnown RBP6.75□□□□□ -1.33
PSEN1-216ENST00000556066 RD3Q7Z3Z2 195 aa6.75□□□□□ -1.33
PSEN1-216ENST00000556066 CAMK1DQ8IU85 385 aa6.75□□□□□ -1.33
PSEN1-216ENST00000556066 HID1Q8IV36 788 aa6.75□□□□□ -1.33
PSEN1-216ENST00000556066 PHACTR4Q8IZ21 702 aa6.75□□□□□ -1.33
PSEN1-216ENST00000556066 FAM181AQ8N9Y4 354 aa6.75□□□□□ -1.33
PSEN1-216ENST00000556066 BTN2A2Q8WVV5 523 aa6.75□□□□□ -1.33
PSEN1-216ENST00000556066 ASB12Q8WXK4 309 aa6.75□□□□□ -1.33
PSEN1-216ENST00000556066 FGF11Q92914 225 aa6.75□□□□□ -1.33
PSEN1-216ENST00000556066 TSACCQ96A04 125 aaPredicted RBP6.75□□□□□ -1.33
PSEN1-216ENST00000556066 VOPP1Q96AW1 172 aa6.75□□□□□ -1.33
PSEN1-216ENST00000556066 VCPIP1Q96JH7 1222 aa6.75□□□□□ -1.33
PSEN1-216ENST00000556066 DEPDC7Q96QD5 511 aa6.75□□□□□ -1.33
PSEN1-216ENST00000556066 LGMNQ99538 433 aa6.75□□□□□ -1.33
PSEN1-216ENST00000556066 SNRNP25Q9BV90 132 aaKnown RBP6.75□□□□□ -1.33
PSEN1-216ENST00000556066 LRRC61Q9BV99 259 aa6.75□□□□□ -1.33
PSEN1-216ENST00000556066 CINPQ9BW66 212 aaPredicted RBP6.75□□□□□ -1.33
PSEN1-216ENST00000556066 CPEB1Q9BZB8 566 aaKnown RBP6.75□□□□□ -1.33
PSEN1-216ENST00000556066 TRIM7Q9C029 511 aa6.75□□□□□ -1.33
PSEN1-216ENST00000556066 SLC39A8Q9C0K1 460 aa6.75□□□□□ -1.33
PSEN1-216ENST00000556066 SUV39H2Q9H5I1 410 aa6.75□□□□□ -1.33
PSEN1-216ENST00000556066 HAUS4Q9H6D7 363 aa6.75□□□□□ -1.33
PSEN1-216ENST00000556066 SYNDIG1Q9H7V2 258 aa6.75□□□□□ -1.33
PSEN1-216ENST00000556066 SP110Q9HB58 689 aa6.75□□□□□ -1.33
PSEN1-216ENST00000556066 USP29Q9HBJ7 922 aa6.75□□□□□ -1.33
PSEN1-216ENST00000556066 CBX8Q9HC52 389 aa6.75□□□□□ -1.33
PSEN1-216ENST00000556066 PCDH12Q9NPG4 1184 aa6.75□□□□□ -1.33
PSEN1-216ENST00000556066 MBNL1Q9NR56 388 aaKnown RBP6.75□□□□□ -1.33
PSEN1-216ENST00000556066 CUEDC1Q9NWM3 386 aaPredicted RBP6.75□□□□□ -1.33
PSEN1-216ENST00000556066 MYO1AQ9UBC5 1043 aa6.75□□□□□ -1.33
PSEN1-216ENST00000556066 SPASTQ9UBP0 616 aa6.75□□□□□ -1.33
PSEN1-216ENST00000556066 DKK3Q9UBP4 350 aa6.75□□□□□ -1.33
PSEN1-216ENST00000556066 GULP1Q9UBP9 304 aa6.75□□□□□ -1.33
PSEN1-216ENST00000556066 CNOT8Q9UFF9 292 aaKnown RBP6.75□□□□□ -1.33
PSEN1-216ENST00000556066 MYO6Q9UM54 1294 aa6.75□□□□□ -1.33
PSEN1-216ENST00000556066 MFHAS1Q9Y4C4 1052 aa6.75□□□□□ -1.33
PSEN1-216ENST00000556066 CSNK1G3Q9Y6M4 447 aa6.75□□□□□ -1.33
PSEN1-216ENST00000556066 U3KQA8 63 aa6.75□□□□□ -1.33
PSEN1-216ENST00000556066 TEX15Q9BXT5 2789 aa6.74□□□□□ -1.33
PSEN1-216ENST00000556066 NOTCH2Q04721 2471 aa6.74□□□□□ -1.33
PSEN1-216ENST00000556066 LRRK2Q5S007 2527 aa6.74□□□□□ -1.33
PSEN1-216ENST00000556066 A6NJY4 79 aa6.74□□□□□ -1.33
PSEN1-216ENST00000556066 A8MX80 341 aa6.74□□□□□ -1.33
PSEN1-216ENST00000556066 BUB1BO60566 1050 aaPredicted RBP6.74□□□□□ -1.33
PSEN1-216ENST00000556066 PRAMEF11O60813 436 aa6.74□□□□□ -1.33
PSEN1-216ENST00000556066 SERPINC1P01008 464 aa6.74□□□□□ -1.33
PSEN1-216ENST00000556066 PRB1P04280 392 aa6.74□□□□□ -1.33
PSEN1-216ENST00000556066 PCCBP05166 539 aa6.74□□□□□ -1.33
PSEN1-216ENST00000556066 GP1BAP07359 652 aa6.74□□□□□ -1.33
PSEN1-216ENST00000556066 CELA2BP08218 269 aaPredicted RBP6.74□□□□□ -1.33
PSEN1-216ENST00000556066 SKILP12757 684 aa6.74□□□□□ -1.33
PSEN1-216ENST00000556066 C6P13671 934 aa6.74□□□□□ -1.33
PSEN1-216ENST00000556066 CTSEP14091 401 aa6.74□□□□□ -1.33
PSEN1-216ENST00000556066 TSHRP16473 764 aa6.74□□□□□ -1.33
PSEN1-216ENST00000556066 ERCC2P18074 760 aa6.74□□□□□ -1.33
PSEN1-216ENST00000556066 TGM2P21980 687 aa6.74□□□□□ -1.33
PSEN1-216ENST00000556066 HTR1BP28222 390 aa6.74□□□□□ -1.33
PSEN1-216ENST00000556066 SERPINA4P29622 427 aa6.74□□□□□ -1.33
PSEN1-216ENST00000556066 MIPP30301 263 aa6.74□□□□□ -1.33
PSEN1-216ENST00000556066 HTR7P34969 479 aa6.74□□□□□ -1.33
PSEN1-216ENST00000556066 RGRP47804 291 aa6.74□□□□□ -1.33
PSEN1-216ENST00000556066 ZNF165P49910 485 aa6.74□□□□□ -1.33
PSEN1-216ENST00000556066 LIG3P49916 1009 aa6.74□□□□□ -1.33
PSEN1-216ENST00000556066 BLKP51451 505 aa6.74□□□□□ -1.33
PSEN1-216ENST00000556066 SUOXP51687 545 aa6.74□□□□□ -1.33
PSEN1-216ENST00000556066 YPEL5P62699 121 aa6.74□□□□□ -1.33
PSEN1-216ENST00000556066 KLHL30Q0D2K2 578 aa6.74□□□□□ -1.33
PSEN1-216ENST00000556066 INPP5AQ14642 412 aa6.74□□□□□ -1.33
PSEN1-216ENST00000556066 GRM3Q14832 879 aa6.74□□□□□ -1.33
PSEN1-216ENST00000556066 NR0B2Q15466 257 aa6.74□□□□□ -1.33
PSEN1-216ENST00000556066 OCLNQ16625 522 aa6.74□□□□□ -1.33
PSEN1-216ENST00000556066 UGP2Q16851 508 aa6.74□□□□□ -1.33
PSEN1-216ENST00000556066 WSCD2Q2TBF2 565 aa6.74□□□□□ -1.33
PSEN1-216ENST00000556066 TBC1D25Q3MII6 688 aa6.74□□□□□ -1.33
PSEN1-216ENST00000556066 TMEM52BQ4KMG9 183 aa6.74□□□□□ -1.33
PSEN1-216ENST00000556066 PLEKHA7Q6IQ23 1121 aa6.74□□□□□ -1.33
PSEN1-216ENST00000556066 FOXR1Q6PIV2 292 aa6.74□□□□□ -1.33
PSEN1-216ENST00000556066 BRAT1Q6PJG6 821 aa6.74□□□□□ -1.33
PSEN1-216ENST00000556066 ENPP7Q6UWV6 458 aa6.74□□□□□ -1.33
PSEN1-216ENST00000556066 MACC1Q6ZN28 852 aa6.74□□□□□ -1.33
PSEN1-216ENST00000556066 RFX8Q6ZV50 586 aa6.74□□□□□ -1.33
PSEN1-216ENST00000556066 ZNF571Q7Z3V5 609 aaPredicted RBP6.74□□□□□ -1.33
PSEN1-216ENST00000556066 SRLQ86TD4 932 aa6.74□□□□□ -1.33
PSEN1-216ENST00000556066 LUZP1Q86V48 1076 aa6.74□□□□□ -1.33
PSEN1-216ENST00000556066 CACTIN-AS1Q8N1I8 211 aa6.74□□□□□ -1.33
PSEN1-216ENST00000556066 ARFGAP1Q8N6T3 406 aa6.74□□□□□ -1.33
PSEN1-216ENST00000556066 TP53I13Q8NBR0 393 aaPredicted RBP6.74□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms