RNA–Protein interactions for RNA: ENST00000555883.5

HNRNPC-221, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 1 (best) BASIC

Gene HNRNPC, Length 1,182 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-221ENST00000555883 EIF3IQ13347 325 aaKnown RBP12.74□□□□□ -0.37
HNRNPC-221ENST00000555883 SPIDRQ14159 915 aa12.74□□□□□ -0.37
HNRNPC-221ENST00000555883 TSR1Q2NL82 804 aaKnown RBP12.74□□□□□ -0.37
HNRNPC-221ENST00000555883 OGFOD3Q6PK18 319 aa12.74□□□□□ -0.37
HNRNPC-221ENST00000555883 GPR155Q7Z3F1 870 aa12.74□□□□□ -0.37
HNRNPC-221ENST00000555883 CLEC14AQ86T13 490 aa12.74□□□□□ -0.37
HNRNPC-221ENST00000555883 PLA2G15Q8NCC3 412 aa12.74□□□□□ -0.37
HNRNPC-221ENST00000555883 GPR156Q8NFN8 814 aa12.74□□□□□ -0.37
HNRNPC-221ENST00000555883 WDR36Q8NI36 951 aaKnown RBP12.74□□□□□ -0.37
HNRNPC-221ENST00000555883 SNRNP27Q8WVK2 155 aaKnown RBP12.74□□□□□ -0.37
HNRNPC-221ENST00000555883 TSACCQ96A04 125 aaPredicted RBP12.74□□□□□ -0.37
HNRNPC-221ENST00000555883 FUBP1Q96AE4 644 aaKnown RBP12.74□□□□□ -0.37
HNRNPC-221ENST00000555883 PDXPQ96GD0 296 aa12.74□□□□□ -0.37
HNRNPC-221ENST00000555883 PRR11Q96HE9 360 aaPredicted RBP12.74□□□□□ -0.37
HNRNPC-221ENST00000555883 COQ10AQ96MF6 247 aa12.74□□□□□ -0.37
HNRNPC-221ENST00000555883 THAP2Q9H0W7 228 aa12.74□□□□□ -0.37
HNRNPC-221ENST00000555883 WDR26Q9H7D7 661 aa12.74□□□□□ -0.37
HNRNPC-221ENST00000555883 PCDH18Q9HCL0 1135 aa12.74□□□□□ -0.37
HNRNPC-221ENST00000555883 LCMT1Q9UIC8 334 aa12.74□□□□□ -0.37
HNRNPC-221ENST00000555883 APPL1Q9UKG1 709 aa12.74□□□□□ -0.37
HNRNPC-221ENST00000555883 CAPN11Q9UMQ6 739 aa12.74□□□□□ -0.37
HNRNPC-221ENST00000555883 GPR34Q9UPC5 381 aa12.74□□□□□ -0.37
HNRNPC-221ENST00000555883 SATB2Q9UPW6 733 aa12.74□□□□□ -0.37
HNRNPC-221ENST00000555883 PPIL1Q9Y3C6 166 aa12.74□□□□□ -0.37
HNRNPC-221ENST00000555883 TDRD6O60522 2096 aaKnown RBP12.73□□□□□ -0.37
HNRNPC-221ENST00000555883 CCDC187A0A096LP49 1063 aa12.73□□□□□ -0.37
HNRNPC-221ENST00000555883 A0A1W2PNU3 283 aaPredicted RBP12.73□□□□□ -0.37
HNRNPC-221ENST00000555883 CDRT15L2A8MXV6 281 aa12.73□□□□□ -0.37
HNRNPC-221ENST00000555883 PRKCGP05129 697 aa12.73□□□□□ -0.37
HNRNPC-221ENST00000555883 CELA2BP08218 269 aaPredicted RBP12.73□□□□□ -0.37
HNRNPC-221ENST00000555883 ITGA2BP08514 1039 aa12.73□□□□□ -0.37
HNRNPC-221ENST00000555883 MYCLP1P12525 358 aaPredicted RBP12.73□□□□□ -0.37
HNRNPC-221ENST00000555883 GLB1P16278 677 aa12.73□□□□□ -0.37
HNRNPC-221ENST00000555883 RBMS1P29558 406 aaKnown RBP12.73□□□□□ -0.37
HNRNPC-221ENST00000555883 TMPRSS3P57727 454 aa12.73□□□□□ -0.37
HNRNPC-221ENST00000555883 FANCCQ00597 558 aa12.73□□□□□ -0.37
HNRNPC-221ENST00000555883 CCDC173Q0VFZ6 552 aa12.73□□□□□ -0.37
HNRNPC-221ENST00000555883 SMTNL2Q2TAL5 461 aa12.73□□□□□ -0.37
HNRNPC-221ENST00000555883 C3orf38Q5JPI3 329 aa12.73□□□□□ -0.37
HNRNPC-221ENST00000555883 MARC1Q5VT66 337 aa12.73□□□□□ -0.37
HNRNPC-221ENST00000555883 BROXQ5VW32 411 aa12.73□□□□□ -0.37
HNRNPC-221ENST00000555883 PNCKQ6P2M8 343 aa12.73□□□□□ -0.37
HNRNPC-221ENST00000555883 TP53INP2Q8IXH6 220 aa12.73□□□□□ -0.37
HNRNPC-221ENST00000555883 ARL14Q8N4G2 192 aa12.73□□□□□ -0.37
HNRNPC-221ENST00000555883 ATPAF2Q8N5M1 289 aa12.73□□□□□ -0.37
HNRNPC-221ENST00000555883 TEX26Q8N6G2 289 aa12.73□□□□□ -0.37
HNRNPC-221ENST00000555883 KYQ8NBH2 561 aa12.73□□□□□ -0.37
HNRNPC-221ENST00000555883 NSMCE1Q8WV22 266 aa12.73□□□□□ -0.37
HNRNPC-221ENST00000555883 HSPH1Q92598 858 aa12.73□□□□□ -0.37
HNRNPC-221ENST00000555883 FATE1Q969F0 183 aa12.73□□□□□ -0.37
HNRNPC-221ENST00000555883 SCRN2Q96FV2 425 aa12.73□□□□□ -0.37
HNRNPC-221ENST00000555883 ATXN7L3BQ96GX2 97 aa12.73□□□□□ -0.37
HNRNPC-221ENST00000555883 NSMCE3Q96MG7 304 aa12.73□□□□□ -0.37
HNRNPC-221ENST00000555883 MCCC1Q96RQ3 725 aaPredicted RBP12.73□□□□□ -0.37
HNRNPC-221ENST00000555883 CBX8Q9HC52 389 aa12.73□□□□□ -0.37
HNRNPC-221ENST00000555883 FGF22Q9HCT0 170 aa12.73□□□□□ -0.37
HNRNPC-221ENST00000555883 ETNK2Q9NVF9 386 aa12.73□□□□□ -0.37
HNRNPC-221ENST00000555883 B4GALT6Q9UBX8 382 aa12.73□□□□□ -0.37
HNRNPC-221ENST00000555883 AMACRQ9UHK6 382 aa12.73□□□□□ -0.37
HNRNPC-221ENST00000555883 ANAPC7Q9UJX3 599 aa12.73□□□□□ -0.37
HNRNPC-221ENST00000555883 PHTF1Q9UMS5 762 aa12.73□□□□□ -0.37
HNRNPC-221ENST00000555883 RAI2Q9Y5P3 530 aa12.73□□□□□ -0.37
HNRNPC-221ENST00000555883 ATMQ13315 3056 aa12.73□□□□□ -0.37
HNRNPC-221ENST00000555883 LRP4O75096 1905 aa12.72□□□□□ -0.37
HNRNPC-221ENST00000555883 MGAQ8IWI9 3026 aa12.72□□□□□ -0.37
HNRNPC-221ENST00000555883 TMEM202A6NGA9 273 aa12.72□□□□□ -0.37
HNRNPC-221ENST00000555883 EIF4E1BA6NMX2 242 aaKnown RBP12.72□□□□□ -0.37
HNRNPC-221ENST00000555883 D6RAR5 112 aa12.72□□□□□ -0.37
HNRNPC-221ENST00000555883 MYO1FO00160 1098 aa12.72□□□□□ -0.37
HNRNPC-221ENST00000555883 NUDT21O43809 227 aaKnown RBP12.72□□□□□ -0.37
HNRNPC-221ENST00000555883 HEXIM1O94992 359 aaKnown RBP12.72□□□□□ -0.37
HNRNPC-221ENST00000555883 CPP00450 1065 aa12.72□□□□□ -0.37
HNRNPC-221ENST00000555883 CYP2A6P11509 494 aaPredicted RBP12.72□□□□□ -0.37
HNRNPC-221ENST00000555883 TCF4P15884 667 aa12.72□□□□□ -0.37
HNRNPC-221ENST00000555883 AMPD1P23109 780 aa12.72□□□□□ -0.37
HNRNPC-221ENST00000555883 CES1P23141 567 aa12.72□□□□□ -0.37
HNRNPC-221ENST00000555883 IL4RP24394 825 aa12.72□□□□□ -0.37
HNRNPC-221ENST00000555883 HNRNPH3P31942 346 aaKnown RBP12.72□□□□□ -0.37
HNRNPC-221ENST00000555883 CCKBRP32239 447 aa12.72□□□□□ -0.37
HNRNPC-221ENST00000555883 VIPR1P32241 457 aa12.72□□□□□ -0.37
HNRNPC-221ENST00000555883 MMP13P45452 471 aa12.72□□□□□ -0.37
HNRNPC-221ENST00000555883 UBASH3AP57075 661 aa12.72□□□□□ -0.37
HNRNPC-221ENST00000555883 DPTQ07507 201 aa12.72□□□□□ -0.37
HNRNPC-221ENST00000555883 ALG1LQ6GMV1 187 aa12.72□□□□□ -0.37
HNRNPC-221ENST00000555883 RAVER1Q8IY67 606 aaKnown RBP12.72□□□□□ -0.37
HNRNPC-221ENST00000555883 PGBD5Q8N414 524 aa12.72□□□□□ -0.37
HNRNPC-221ENST00000555883 PAF1Q8N7H5 531 aa12.72□□□□□ -0.37
HNRNPC-221ENST00000555883 KCNE4Q8WWG9 221 aa12.72□□□□□ -0.37
HNRNPC-221ENST00000555883 OR1E3Q8WZA6 343 aa12.72□□□□□ -0.37
HNRNPC-221ENST00000555883 CCDC74AQ96AQ1 378 aa12.72□□□□□ -0.37
HNRNPC-221ENST00000555883 TMEM159Q96B96 161 aa12.72□□□□□ -0.37
HNRNPC-221ENST00000555883 NUS1Q96E22 293 aa12.72□□□□□ -0.37
HNRNPC-221ENST00000555883 WBP1Q96G27 269 aa12.72□□□□□ -0.37
HNRNPC-221ENST00000555883 GFM1Q96RP9 751 aaKnown RBP12.72□□□□□ -0.37
HNRNPC-221ENST00000555883 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP12.72□□□□□ -0.37
HNRNPC-221ENST00000555883 NUP85Q9BW27 656 aa12.72□□□□□ -0.37
HNRNPC-221ENST00000555883 TEX101Q9BY14 249 aa12.72□□□□□ -0.37
HNRNPC-221ENST00000555883 NOD2Q9HC29 1040 aa12.72□□□□□ -0.37
HNRNPC-221ENST00000555883 HAUS2Q9NVX0 235 aa12.72□□□□□ -0.37
HNRNPC-221ENST00000555883 GULP1Q9UBP9 304 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms