RNA–Protein interactions for RNA: ENST00000555550.1

SCFD1-216, Transcript of sec1 family domain containing 1, humanhuman

TSL 4

Gene SCFD1, Length 541 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-216ENST00000555550 TEX22C9J3V5 150 aa3.82□□□□□ -1.8
SCFD1-216ENST00000555550 SOCS6O14544 535 aa3.82□□□□□ -1.8
SCFD1-216ENST00000555550 XPNPEP2O43895 674 aa3.82□□□□□ -1.8
SCFD1-216ENST00000555550 KLK8O60259 260 aa3.82□□□□□ -1.8
SCFD1-216ENST00000555550 NDUFS7O75251 213 aa3.82□□□□□ -1.8
SCFD1-216ENST00000555550 TACC1O75410 805 aa3.82□□□□□ -1.8
SCFD1-216ENST00000555550 URODP06132 367 aa3.82□□□□□ -1.8
SCFD1-216ENST00000555550 LINC00271P0C7V0 271 aa3.82□□□□□ -1.8
SCFD1-216ENST00000555550 KCNA5P22460 613 aa3.82□□□□□ -1.8
SCFD1-216ENST00000555550 PSMC2P35998 433 aaKnown RBP3.82□□□□□ -1.8
SCFD1-216ENST00000555550 GLIPR1P48060 266 aa3.82□□□□□ -1.8
SCFD1-216ENST00000555550 KHDRBS1Q07666 443 aaKnown RBP eCLIP3.82□□□□□ -1.8
SCFD1-216ENST00000555550 ZNF155Q12901 538 aaPredicted RBP3.82□□□□□ -1.8
SCFD1-216ENST00000555550 OASLQ15646 514 aaKnown RBP3.82□□□□□ -1.8
SCFD1-216ENST00000555550 EFNB3Q15768 340 aa3.82□□□□□ -1.8
SCFD1-216ENST00000555550 PPP6R3Q5H9R7 873 aaPredicted RBP3.82□□□□□ -1.8
SCFD1-216ENST00000555550 PAPPA-AS1Q5QFB9 102 aa3.82□□□□□ -1.8
SCFD1-216ENST00000555550 FAM122CQ6P4D5 195 aa3.82□□□□□ -1.8
SCFD1-216ENST00000555550 TMEM81Q6P7N7 255 aa3.82□□□□□ -1.8
SCFD1-216ENST00000555550 GDPD4Q6W3E5 623 aa3.82□□□□□ -1.8
SCFD1-216ENST00000555550 CCNI2Q6ZMN8 369 aaPredicted RBP3.82□□□□□ -1.8
SCFD1-216ENST00000555550 KRBA2Q6ZNG9 492 aa3.82□□□□□ -1.8
SCFD1-216ENST00000555550 RRM2BQ7LG56 351 aa3.82□□□□□ -1.8
SCFD1-216ENST00000555550 PLD5Q8N7P1 536 aa3.82□□□□□ -1.8
SCFD1-216ENST00000555550 ZNF441Q8N8Z8 693 aa3.82□□□□□ -1.8
SCFD1-216ENST00000555550 KCNH5Q8NCM2 988 aa3.82□□□□□ -1.8
SCFD1-216ENST00000555550 C11orf65Q8NCR3 313 aa3.82□□□□□ -1.8
SCFD1-216ENST00000555550 AGBL3Q8NEM8 1001 aa3.82□□□□□ -1.8
SCFD1-216ENST00000555550 CTCFLQ8NI51 663 aaPredicted RBP3.82□□□□□ -1.8
SCFD1-216ENST00000555550 SNAPC3Q92966 411 aa3.82□□□□□ -1.8
SCFD1-216ENST00000555550 TMEM19Q96HH6 336 aa3.82□□□□□ -1.8
SCFD1-216ENST00000555550 C1QTNF5Q9BXJ0 243 aa3.82□□□□□ -1.8
SCFD1-216ENST00000555550 EGLN1Q9GZT9 426 aa3.82□□□□□ -1.8
SCFD1-216ENST00000555550 BPIFA1Q9NP55 256 aa3.82□□□□□ -1.8
SCFD1-216ENST00000555550 CNGB3Q9NQW8 809 aa3.82□□□□□ -1.8
SCFD1-216ENST00000555550 TEX13CA0A0J9YWL9 993 aa3.81□□□□□ -1.8
SCFD1-216ENST00000555550 IFRD1O00458 451 aaPredicted RBP3.81□□□□□ -1.8
SCFD1-216ENST00000555550 TBX6O95947 436 aaPredicted RBP3.81□□□□□ -1.8
SCFD1-216ENST00000555550 SRCP12931 536 aa3.81□□□□□ -1.8
SCFD1-216ENST00000555550 GM2AP17900 193 aa3.81□□□□□ -1.8
SCFD1-216ENST00000555550 ITGAXP20702 1163 aa3.81□□□□□ -1.8
SCFD1-216ENST00000555550 CNTFP26441 200 aa3.81□□□□□ -1.8
SCFD1-216ENST00000555550 IL15P40933 162 aaPredicted RBP3.81□□□□□ -1.8
SCFD1-216ENST00000555550 TROAPQ12815 778 aa3.81□□□□□ -1.8
SCFD1-216ENST00000555550 FOXD4Q12950 439 aaPredicted RBP3.81□□□□□ -1.8
SCFD1-216ENST00000555550 GRIK3Q13003 919 aa3.81□□□□□ -1.8
SCFD1-216ENST00000555550 ZBTB17Q13105 803 aa3.81□□□□□ -1.8
SCFD1-216ENST00000555550 HIST2H2ACQ16777 129 aaPredicted RBP3.81□□□□□ -1.8
SCFD1-216ENST00000555550 TCTN1Q2MV58 587 aa3.81□□□□□ -1.8
SCFD1-216ENST00000555550 ZNF766Q5HY98 468 aa3.81□□□□□ -1.8
SCFD1-216ENST00000555550 IRAK1BP1Q5VVH5 260 aa3.81□□□□□ -1.8
SCFD1-216ENST00000555550 PMS2CLQ68D20 193 aa3.81□□□□□ -1.8
SCFD1-216ENST00000555550 LRRTM4Q86VH4 590 aa3.81□□□□□ -1.8
SCFD1-216ENST00000555550 TDRPQ86YL5 185 aa3.81□□□□□ -1.8
SCFD1-216ENST00000555550 CPOQ8IVL8 374 aa3.81□□□□□ -1.8
SCFD1-216ENST00000555550 DCUN1D3Q8IWE4 304 aa3.81□□□□□ -1.8
SCFD1-216ENST00000555550 FIG4Q92562 907 aa3.81□□□□□ -1.8
SCFD1-216ENST00000555550 KIF1BPQ96EK5 621 aa3.81□□□□□ -1.8
SCFD1-216ENST00000555550 PGLYRP2Q96PD5 576 aa3.81□□□□□ -1.8
SCFD1-216ENST00000555550 HEMGNQ9BXL5 484 aa3.81□□□□□ -1.8
SCFD1-216ENST00000555550 GPR63Q9BZJ6 419 aa3.81□□□□□ -1.8
SCFD1-216ENST00000555550 UBTD1Q9HAC8 227 aa3.81□□□□□ -1.8
SCFD1-216ENST00000555550 C17orf75Q9HAS0 396 aa3.81□□□□□ -1.8
SCFD1-216ENST00000555550 MAGEE1Q9HCI5 957 aa3.81□□□□□ -1.8
SCFD1-216ENST00000555550 SCRT2Q9NQ03 307 aa3.81□□□□□ -1.8
SCFD1-216ENST00000555550 BEX4Q9NWD9 120 aaPredicted RBP3.81□□□□□ -1.8
SCFD1-216ENST00000555550 PLRG1O43660 514 aaKnown RBP3.8□□□□□ -1.8
SCFD1-216ENST00000555550 MT-CYBP00156 380 aaPredicted RBP3.8□□□□□ -1.8
SCFD1-216ENST00000555550 CRYAAP02489 173 aa3.8□□□□□ -1.8
SCFD1-216ENST00000555550 ATP1A1P05023 1023 aaKnown RBP3.8□□□□□ -1.8
SCFD1-216ENST00000555550 MMP2P08253 660 aa3.8□□□□□ -1.8
SCFD1-216ENST00000555550 IRF1P10914 325 aa3.8□□□□□ -1.8
SCFD1-216ENST00000555550 G6PDP11413 515 aa3.8□□□□□ -1.8
SCFD1-216ENST00000555550 EIF2S3P41091 472 aaKnown RBP3.8□□□□□ -1.8
SCFD1-216ENST00000555550 VEGFCP49767 419 aa3.8□□□□□ -1.8
SCFD1-216ENST00000555550 CCR5P51681 352 aa3.8□□□□□ -1.8
SCFD1-216ENST00000555550 ZNF132P52740 706 aa3.8□□□□□ -1.8
SCFD1-216ENST00000555550 CTF1Q16619 201 aa3.8□□□□□ -1.8
SCFD1-216ENST00000555550 SLC36A4Q6YBV0 504 aa3.8□□□□□ -1.8
SCFD1-216ENST00000555550 SMIM29Q86T20 159 aa3.8□□□□□ -1.8
SCFD1-216ENST00000555550 BEST2Q8NFU1 509 aa3.8□□□□□ -1.8
SCFD1-216ENST00000555550 HERVK_113Q902F9 699 aa3.8□□□□□ -1.8
SCFD1-216ENST00000555550 RND1Q92730 232 aa3.8□□□□□ -1.8
SCFD1-216ENST00000555550 GCC1Q96CN9 775 aa3.8□□□□□ -1.8
SCFD1-216ENST00000555550 MPHOSPH8Q99549 860 aa3.8□□□□□ -1.8
SCFD1-216ENST00000555550 LRRC4Q9HBW1 653 aa3.8□□□□□ -1.8
SCFD1-216ENST00000555550 C20orf141Q9NUB4 165 aa3.8□□□□□ -1.8
SCFD1-216ENST00000555550 HCN3Q9P1Z3 774 aa3.8□□□□□ -1.8
SCFD1-216ENST00000555550 PSAT1Q9Y617 370 aa3.8□□□□□ -1.8
SCFD1-216ENST00000555550 GAGE10A6NGK3 116 aa3.79□□□□□ -1.8
SCFD1-216ENST00000555550 TSPAN4O14817 238 aa3.79□□□□□ -1.8
SCFD1-216ENST00000555550 MID1O15344 667 aa3.79□□□□□ -1.8
SCFD1-216ENST00000555550 ZG16O60844 167 aa3.79□□□□□ -1.8
SCFD1-216ENST00000555550 RFPL2O75678 378 aa3.79□□□□□ -1.8
SCFD1-216ENST00000555550 HEXAP06865 529 aa3.79□□□□□ -1.8
SCFD1-216ENST00000555550 CFC1BP0CG36 223 aa3.79□□□□□ -1.8
SCFD1-216ENST00000555550 CFC1P0CG37 223 aa3.79□□□□□ -1.8
SCFD1-216ENST00000555550 CETPP11597 493 aa3.79□□□□□ -1.8
SCFD1-216ENST00000555550 HSD3B1P14060 373 aa3.79□□□□□ -1.8
SCFD1-216ENST00000555550 GGT5P36269 586 aa3.79□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms