RNA–Protein interactions for RNA: ENST00000555386.5

PSEN1-213, Transcript of presenilin 1, humanhuman

TSL 1 (best)

Gene PSEN1, Length 1,484 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-213ENST00000555386 MAP7D1Q3KQU3 841 aa9.94□□□□□ -0.82
PSEN1-213ENST00000555386 DARS2Q6PI48 645 aaKnown RBP9.94□□□□□ -0.82
PSEN1-213ENST00000555386 GDPD4Q6W3E5 623 aa9.94□□□□□ -0.82
PSEN1-213ENST00000555386 CCDC121Q6ZUS5 278 aa9.94□□□□□ -0.82
PSEN1-213ENST00000555386 BZW1Q7L1Q6 419 aaKnown RBP9.94□□□□□ -0.82
PSEN1-213ENST00000555386 METTL3Q86U44 580 aaKnown RBP9.94□□□□□ -0.82
PSEN1-213ENST00000555386 CAMK1DQ8IU85 385 aa9.94□□□□□ -0.82
PSEN1-213ENST00000555386 LRRC49Q8IUZ0 686 aa9.94□□□□□ -0.82
PSEN1-213ENST00000555386 PARP9Q8IXQ6 854 aa9.94□□□□□ -0.82
PSEN1-213ENST00000555386 ZBTB44Q8NCP5 570 aa9.94□□□□□ -0.82
PSEN1-213ENST00000555386 OR14C36Q8NHC7 312 aa9.94□□□□□ -0.82
PSEN1-213ENST00000555386 ARRDC3Q96B67 414 aa9.94□□□□□ -0.82
PSEN1-213ENST00000555386 HDAC11Q96DB2 347 aa9.94□□□□□ -0.82
PSEN1-213ENST00000555386 ZNF419Q96HQ0 510 aaPredicted RBP9.94□□□□□ -0.82
PSEN1-213ENST00000555386 ZNF599Q96NL3 588 aa9.94□□□□□ -0.82
PSEN1-213ENST00000555386 SEMA3CQ99985 751 aa9.94□□□□□ -0.82
PSEN1-213ENST00000555386 ITM2CQ9NQX7 267 aa9.94□□□□□ -0.82
PSEN1-213ENST00000555386 EURLQ9NYK6 297 aa9.94□□□□□ -0.82
PSEN1-213ENST00000555386 FETUBQ9UGM5 382 aa9.94□□□□□ -0.82
PSEN1-213ENST00000555386 RAB23Q9ULC3 237 aa9.94□□□□□ -0.82
PSEN1-213ENST00000555386 EP300Q09472 2414 aaPredicted RBP9.94□□□□□ -0.82
PSEN1-213ENST00000555386 CCDC163A0A0D9SF12 145 aa9.93□□□□□ -0.82
PSEN1-213ENST00000555386 ALOX15BO15296 676 aa9.93□□□□□ -0.82
PSEN1-213ENST00000555386 HLA-DQB2P05538 268 aa9.93□□□□□ -0.82
PSEN1-213ENST00000555386 TSHRP16473 764 aa9.93□□□□□ -0.82
PSEN1-213ENST00000555386 RBL1P28749 1068 aa9.93□□□□□ -0.82
PSEN1-213ENST00000555386 DRD3P35462 400 aa9.93□□□□□ -0.82
PSEN1-213ENST00000555386 VPS41P49754 854 aa9.93□□□□□ -0.82
PSEN1-213ENST00000555386 SLC18A1P54219 525 aa9.93□□□□□ -0.82
PSEN1-213ENST00000555386 DSC2Q02487 901 aa9.93□□□□□ -0.82
PSEN1-213ENST00000555386 BCL2L1Q07817 233 aa9.93□□□□□ -0.82
PSEN1-213ENST00000555386 GPS1Q13098 491 aa9.93□□□□□ -0.82
PSEN1-213ENST00000555386 IFT88Q13099 833 aa9.93□□□□□ -0.82
PSEN1-213ENST00000555386 LACTB2Q53H82 288 aaPredicted RBP9.93□□□□□ -0.82
PSEN1-213ENST00000555386 UBAP2Q5T6F2 1119 aaKnown RBP9.93□□□□□ -0.82
PSEN1-213ENST00000555386 RNASEH2BQ5TBB1 312 aaKnown RBP9.93□□□□□ -0.82
PSEN1-213ENST00000555386 FBXL19Q6PCT2 694 aa9.93□□□□□ -0.82
PSEN1-213ENST00000555386 CENPUQ71F23 418 aa9.93□□□□□ -0.82
PSEN1-213ENST00000555386 KDELC2Q7Z4H8 507 aa9.93□□□□□ -0.82
PSEN1-213ENST00000555386 PIGWQ7Z7B1 504 aa9.93□□□□□ -0.82
PSEN1-213ENST00000555386 CCDC197Q8NCU1 140 aa9.93□□□□□ -0.82
PSEN1-213ENST00000555386 UHMK1Q8TAS1 419 aaKnown RBP9.93□□□□□ -0.82
PSEN1-213ENST00000555386 OLFM3Q96PB7 478 aa9.93□□□□□ -0.82
PSEN1-213ENST00000555386 TSGA13Q96PP4 275 aa9.93□□□□□ -0.82
PSEN1-213ENST00000555386 PSKH2Q96QS6 385 aa9.93□□□□□ -0.82
PSEN1-213ENST00000555386 BTBD1Q9H0C5 482 aa9.93□□□□□ -0.82
PSEN1-213ENST00000555386 IRF2BPLQ9H1B7 796 aa9.93□□□□□ -0.82
PSEN1-213ENST00000555386 NOD2Q9HC29 1040 aa9.93□□□□□ -0.82
PSEN1-213ENST00000555386 SENP1Q9P0U3 644 aa9.93□□□□□ -0.82
PSEN1-213ENST00000555386 SAMD15Q9P1V8 674 aa9.93□□□□□ -0.82
PSEN1-213ENST00000555386 USP36Q9P275 1121 aaKnown RBP9.93□□□□□ -0.82
PSEN1-213ENST00000555386 PCDHGC4Q9Y5F7 938 aa9.93□□□□□ -0.82
PSEN1-213ENST00000555386 PTPRZ1P23471 2315 aaPredicted RBP9.93□□□□□ -0.82
PSEN1-213ENST00000555386 TBC1D3DA0A087WVF3 549 aa9.92□□□□□ -0.82
PSEN1-213ENST00000555386 TBC1D3IA0A087WXS9 549 aa9.92□□□□□ -0.82
PSEN1-213ENST00000555386 TBC1D3EA0A087X179 549 aa9.92□□□□□ -0.82
PSEN1-213ENST00000555386 TBC1D3KA0A087X1G2 549 aa9.92□□□□□ -0.82
PSEN1-213ENST00000555386 TBC1D3FA6NER0 549 aaPredicted RBP9.92□□□□□ -0.82
PSEN1-213ENST00000555386 GOLGA8CPA6NN73 597 aa9.92□□□□□ -0.82
PSEN1-213ENST00000555386 C16orf96A6NNT2 1141 aa9.92□□□□□ -0.82
PSEN1-213ENST00000555386 A8MX80 341 aa9.92□□□□□ -0.82
PSEN1-213ENST00000555386 TBC1D3LB9A6J9 549 aa9.92□□□□□ -0.82
PSEN1-213ENST00000555386 NEMP1O14524 444 aa9.92□□□□□ -0.82
PSEN1-213ENST00000555386 KCNN4O15554 427 aa9.92□□□□□ -0.82
PSEN1-213ENST00000555386 PCDH8O95206 1070 aa9.92□□□□□ -0.82
PSEN1-213ENST00000555386 TBC1D3HP0C7X1 549 aa9.92□□□□□ -0.82
PSEN1-213ENST00000555386 RBP3P10745 1247 aa9.92□□□□□ -0.82
PSEN1-213ENST00000555386 XPAP23025 273 aaPredicted RBP9.92□□□□□ -0.82
PSEN1-213ENST00000555386 OXTRP30559 389 aa9.92□□□□□ -0.82
PSEN1-213ENST00000555386 NHLH1Q02575 133 aa9.92□□□□□ -0.82
PSEN1-213ENST00000555386 ZBTB16Q05516 673 aa9.92□□□□□ -0.82
PSEN1-213ENST00000555386 ACTN3Q08043 901 aaPredicted RBP9.92□□□□□ -0.82
PSEN1-213ENST00000555386 CBLBQ13191 982 aa9.92□□□□□ -0.82
PSEN1-213ENST00000555386 HNRNPDQ14103 355 aaKnown RBP9.92□□□□□ -0.82
PSEN1-213ENST00000555386 PRKD1Q15139 912 aaPredicted RBP9.92□□□□□ -0.82
PSEN1-213ENST00000555386 NOMO1Q15155 1222 aa9.92□□□□□ -0.82
PSEN1-213ENST00000555386 CCDC6Q16204 474 aa9.92□□□□□ -0.82
PSEN1-213ENST00000555386 QPCTQ16769 361 aa9.92□□□□□ -0.82
PSEN1-213ENST00000555386 SLC45A4Q5BKX6 768 aa9.92□□□□□ -0.82
PSEN1-213ENST00000555386 TBC1D3GQ6DHY5 549 aa9.92□□□□□ -0.82
PSEN1-213ENST00000555386 TBC1D3CQ6IPX1 549 aa9.92□□□□□ -0.82
PSEN1-213ENST00000555386 NCEH1Q6PIU2 408 aa9.92□□□□□ -0.82
PSEN1-213ENST00000555386 PPP1R21Q6ZMI0 780 aa9.92□□□□□ -0.82
PSEN1-213ENST00000555386 ARHGEF18Q6ZSZ5 1173 aa9.92□□□□□ -0.82
PSEN1-213ENST00000555386 PARS2Q7L3T8 475 aaKnown RBP9.92□□□□□ -0.82
PSEN1-213ENST00000555386 LPCAT2Q7L5N7 544 aa9.92□□□□□ -0.82
PSEN1-213ENST00000555386 TTC7BQ86TV6 843 aa9.92□□□□□ -0.82
PSEN1-213ENST00000555386 PPIL6Q8IXY8 311 aa9.92□□□□□ -0.82
PSEN1-213ENST00000555386 RGL4Q8IZJ4 473 aa9.92□□□□□ -0.82
PSEN1-213ENST00000555386 TBC1D3Q8IZP1 549 aaPredicted RBP9.92□□□□□ -0.82
PSEN1-213ENST00000555386 TAB3Q8N5C8 712 aaPredicted RBP9.92□□□□□ -0.82
PSEN1-213ENST00000555386 TMIEQ8NEW7 156 aa9.92□□□□□ -0.82
PSEN1-213ENST00000555386 MAML1Q92585 1016 aa9.92□□□□□ -0.82
PSEN1-213ENST00000555386 NELL1Q92832 810 aa9.92□□□□□ -0.82
PSEN1-213ENST00000555386 KLK6Q92876 244 aa9.92□□□□□ -0.82
PSEN1-213ENST00000555386 SGSM3Q96HU1 749 aa9.92□□□□□ -0.82
PSEN1-213ENST00000555386 PPP1R16AQ96I34 528 aa9.92□□□□□ -0.82
PSEN1-213ENST00000555386 NSMCE3Q96MG7 304 aa9.92□□□□□ -0.82
PSEN1-213ENST00000555386 HSPA12BQ96MM6 686 aa9.92□□□□□ -0.82
PSEN1-213ENST00000555386 QKIQ96PU8 341 aaKnown RBP eCLIP9.92□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms