RNA–Protein interactions for RNA: ENST00000555323.1

SYNE2-219, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 3

Gene SYNE2, Length 389 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-219ENST00000555323 OLIG2Q13516 323 aa12.71□□□□□ -0.37
SYNE2-219ENST00000555323 SIM2Q14190 667 aaPredicted RBP12.71□□□□□ -0.37
SYNE2-219ENST00000555323 PTPRRQ15256 657 aa12.71□□□□□ -0.37
SYNE2-219ENST00000555323 CNGA3Q16281 694 aa12.71□□□□□ -0.37
SYNE2-219ENST00000555323 ZNF284Q2VY69 593 aa12.71□□□□□ -0.37
SYNE2-219ENST00000555323 GLE1Q53GS7 698 aaKnown RBP12.71□□□□□ -0.37
SYNE2-219ENST00000555323 RNASEH2BQ5TBB1 312 aaKnown RBP12.71□□□□□ -0.37
SYNE2-219ENST00000555323 DUPD1Q68J44 220 aa12.71□□□□□ -0.37
SYNE2-219ENST00000555323 LPCAT2Q7L5N7 544 aa12.71□□□□□ -0.37
SYNE2-219ENST00000555323 TMC3Q7Z5M5 1100 aa12.71□□□□□ -0.37
SYNE2-219ENST00000555323 NLRP8Q86W28 1048 aa12.71□□□□□ -0.37
SYNE2-219ENST00000555323 SLC41A1Q8IVJ1 513 aa12.71□□□□□ -0.37
SYNE2-219ENST00000555323 TAB3Q8N5C8 712 aaPredicted RBP12.71□□□□□ -0.37
SYNE2-219ENST00000555323 SLC25A41Q8N5S1 370 aa12.71□□□□□ -0.37
SYNE2-219ENST00000555323 BRSK1Q8TDC3 778 aa12.71□□□□□ -0.37
SYNE2-219ENST00000555323 EID2BQ96D98 161 aa12.71□□□□□ -0.37
SYNE2-219ENST00000555323 LENG8Q96PV6 779 aaPredicted RBP12.71□□□□□ -0.37
SYNE2-219ENST00000555323 SMIM14Q96QK8 99 aa12.71□□□□□ -0.37
SYNE2-219ENST00000555323 ORAI3Q9BRQ5 295 aa12.71□□□□□ -0.37
SYNE2-219ENST00000555323 LRRC1Q9BTT6 524 aa12.71□□□□□ -0.37
SYNE2-219ENST00000555323 CARD6Q9BX69 1037 aa12.71□□□□□ -0.37
SYNE2-219ENST00000555323 EPC1Q9H2F5 836 aa12.71□□□□□ -0.37
SYNE2-219ENST00000555323 SEMA4AQ9H3S1 761 aa12.71□□□□□ -0.37
SYNE2-219ENST00000555323 KCTD5Q9NXV2 234 aa12.71□□□□□ -0.37
SYNE2-219ENST00000555323 ASIC3Q9UHC3 531 aa12.71□□□□□ -0.37
SYNE2-219ENST00000555323 NUMA1Q14980 2115 aa12.71□□□□□ -0.38
SYNE2-219ENST00000555323 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa12.7□□□□□ -0.38
SYNE2-219ENST00000555323 A0A1W2PPC4 97 aa12.7□□□□□ -0.38
SYNE2-219ENST00000555323 RGSL1A5PLK6 1076 aa12.7□□□□□ -0.38
SYNE2-219ENST00000555323 IGLON5A6NGN9 336 aa12.7□□□□□ -0.38
SYNE2-219ENST00000555323 EFCAB8A8MWE9 144 aa12.7□□□□□ -0.38
SYNE2-219ENST00000555323 BHMG1C9JSJ3 638 aaPredicted RBP12.7□□□□□ -0.38
SYNE2-219ENST00000555323 MMP20O60882 483 aa12.7□□□□□ -0.38
SYNE2-219ENST00000555323 TM7SF2O76062 418 aa12.7□□□□□ -0.38
SYNE2-219ENST00000555323 CLDN7O95471 211 aa12.7□□□□□ -0.38
SYNE2-219ENST00000555323 MLNP12872 115 aa12.7□□□□□ -0.38
SYNE2-219ENST00000555323 GM2AP17900 193 aa12.7□□□□□ -0.38
SYNE2-219ENST00000555323 HMGCLP35914 325 aa12.7□□□□□ -0.38
SYNE2-219ENST00000555323 LMAN1P49257 510 aa12.7□□□□□ -0.38
SYNE2-219ENST00000555323 STC1P52823 247 aa12.7□□□□□ -0.38
SYNE2-219ENST00000555323 PPP2CBP62714 309 aa12.7□□□□□ -0.38
SYNE2-219ENST00000555323 PPP2CAP67775 309 aa12.7□□□□□ -0.38
SYNE2-219ENST00000555323 SARNPP82979 210 aaKnown RBP12.7□□□□□ -0.38
SYNE2-219ENST00000555323 SEMG2Q02383 582 aa12.7□□□□□ -0.38
SYNE2-219ENST00000555323 ARHGEF7Q14155 803 aa12.7□□□□□ -0.38
SYNE2-219ENST00000555323 FGL2Q14314 439 aa12.7□□□□□ -0.38
SYNE2-219ENST00000555323 ARMC3Q5W041 872 aa12.7□□□□□ -0.38
SYNE2-219ENST00000555323 SEL1L3Q68CR1 1132 aa12.7□□□□□ -0.38
SYNE2-219ENST00000555323 LRRC66Q68CR7 880 aa12.7□□□□□ -0.38
SYNE2-219ENST00000555323 LRRC8BQ6P9F7 803 aa12.7□□□□□ -0.38
SYNE2-219ENST00000555323 ZNF534Q76KX8 674 aa12.7□□□□□ -0.38
SYNE2-219ENST00000555323 CYP2U1Q7Z449 544 aa12.7□□□□□ -0.38
SYNE2-219ENST00000555323 TECPR1Q7Z6L1 1165 aa12.7□□□□□ -0.38
SYNE2-219ENST00000555323 TSPAN33Q86UF1 283 aa12.7□□□□□ -0.38
SYNE2-219ENST00000555323 HOOK3Q86VS8 718 aa12.7□□□□□ -0.38
SYNE2-219ENST00000555323 PPIL6Q8IXY8 311 aa12.7□□□□□ -0.38
SYNE2-219ENST00000555323 TMEFF1Q8IYR6 380 aa12.7□□□□□ -0.38
SYNE2-219ENST00000555323 NOA1Q8NC60 698 aaKnown RBP12.7□□□□□ -0.38
SYNE2-219ENST00000555323 OR52K1Q8NGK4 314 aa12.7□□□□□ -0.38
SYNE2-219ENST00000555323 C1orf216Q8TAB5 229 aa12.7□□□□□ -0.38
SYNE2-219ENST00000555323 CXorf40AQ8TE69 158 aa12.7□□□□□ -0.38
SYNE2-219ENST00000555323 SEC14L1Q92503 715 aa12.7□□□□□ -0.38
SYNE2-219ENST00000555323 LOXL4Q96JB6 756 aa12.7□□□□□ -0.38
SYNE2-219ENST00000555323 COQ10AQ96MF6 247 aa12.7□□□□□ -0.38
SYNE2-219ENST00000555323 APOL2Q9BQE5 337 aa12.7□□□□□ -0.38
SYNE2-219ENST00000555323 TRIM51Q9BSJ1 452 aa12.7□□□□□ -0.38
SYNE2-219ENST00000555323 SLC17A9Q9BYT1 436 aa12.7□□□□□ -0.38
SYNE2-219ENST00000555323 EBF2Q9HAK2 575 aa12.7□□□□□ -0.38
SYNE2-219ENST00000555323 ZFYVE1Q9HBF4 777 aa12.7□□□□□ -0.38
SYNE2-219ENST00000555323 WHRNQ9P202 907 aa12.7□□□□□ -0.38
SYNE2-219ENST00000555323 DMTF1Q9Y222 760 aa12.7□□□□□ -0.38
SYNE2-219ENST00000555323 SPO11Q9Y5K1 396 aa12.7□□□□□ -0.38
SYNE2-219ENST00000555323 C1orf232A0A0U1RR37 186 aa12.69□□□□□ -0.38
SYNE2-219ENST00000555323 A8MX80 341 aa12.69□□□□□ -0.38
SYNE2-219ENST00000555323 NDC80O14777 642 aa12.69□□□□□ -0.38
SYNE2-219ENST00000555323 AURKAO14965 403 aa12.69□□□□□ -0.38
SYNE2-219ENST00000555323 SEC31AO94979 1220 aaKnown RBP12.69□□□□□ -0.38
SYNE2-219ENST00000555323 PAK4O96013 591 aaPredicted RBP12.69□□□□□ -0.38
SYNE2-219ENST00000555323 ELFN1P0C7U0 828 aa12.69□□□□□ -0.38
SYNE2-219ENST00000555323 C6P13671 934 aa12.69□□□□□ -0.38
SYNE2-219ENST00000555323 PSMA3P25788 255 aa12.69□□□□□ -0.38
SYNE2-219ENST00000555323 CD27P26842 260 aa12.69□□□□□ -0.38
SYNE2-219ENST00000555323 NBL1P41271 181 aa12.69□□□□□ -0.38
SYNE2-219ENST00000555323 PTGER3P43115 390 aa12.69□□□□□ -0.38
SYNE2-219ENST00000555323 MAGEA3P43357 314 aa12.69□□□□□ -0.38
SYNE2-219ENST00000555323 NPY2RP49146 381 aa12.69□□□□□ -0.38
SYNE2-219ENST00000555323 MRPS25P82663 173 aaKnown RBP12.69□□□□□ -0.38
SYNE2-219ENST00000555323 MORF4L2Q15014 288 aa12.69□□□□□ -0.38
SYNE2-219ENST00000555323 TAF1AQ15573 450 aaPredicted RBP12.69□□□□□ -0.38
SYNE2-219ENST00000555323 ELF2Q15723 593 aa12.69□□□□□ -0.38
SYNE2-219ENST00000555323 SYCP2LQ5T4T6 812 aa12.69□□□□□ -0.38
SYNE2-219ENST00000555323 ANKRD22Q5VYY1 191 aa12.69□□□□□ -0.38
SYNE2-219ENST00000555323 HIBCHQ6NVY1 386 aaPredicted RBP12.69□□□□□ -0.38
SYNE2-219ENST00000555323 CEP68Q76N32 757 aa12.69□□□□□ -0.38
SYNE2-219ENST00000555323 HSD11B1LQ7Z5J1 315 aa12.69□□□□□ -0.38
SYNE2-219ENST00000555323 NRSN1Q8IZ57 195 aa12.69□□□□□ -0.38
SYNE2-219ENST00000555323 ABCA7Q8IZY2 2146 aa12.69□□□□□ -0.38
SYNE2-219ENST00000555323 TTC30BQ8N4P2 665 aa12.69□□□□□ -0.38
SYNE2-219ENST00000555323 BBOF1Q8ND07 529 aa12.69□□□□□ -0.38
SYNE2-219ENST00000555323 DTX3LQ8TDB6 740 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms