RNA–Protein interactions for RNA: ENST00000555046.1

TMEM260-206, Transcript of transmembrane protein 260, humanhuman

TSL 3

Gene TMEM260, Length 618 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-206ENST00000555046 TLR4O00206 839 aa10.64□□□□□ -0.71
TMEM260-206ENST00000555046 PSMD11O00231 422 aa10.64□□□□□ -0.71
TMEM260-206ENST00000555046 CES2O00748 559 aa10.64□□□□□ -0.71
TMEM260-206ENST00000555046 KCNN4O15554 427 aa10.64□□□□□ -0.71
TMEM260-206ENST00000555046 MMP20O60882 483 aa10.64□□□□□ -0.71
TMEM260-206ENST00000555046 GCATO75600 419 aa10.64□□□□□ -0.71
TMEM260-206ENST00000555046 FGGP02679 453 aa10.64□□□□□ -0.71
TMEM260-206ENST00000555046 ELFN1P0C7U0 828 aa10.64□□□□□ -0.71
TMEM260-206ENST00000555046 ZNF30P17039 623 aa10.64□□□□□ -0.71
TMEM260-206ENST00000555046 TCP1P17987 556 aaKnown RBP10.64□□□□□ -0.71
TMEM260-206ENST00000555046 CSNK1EP49674 416 aaKnown RBP10.64□□□□□ -0.71
TMEM260-206ENST00000555046 LIG3P49916 1009 aa10.64□□□□□ -0.71
TMEM260-206ENST00000555046 GEMP55040 296 aa10.64□□□□□ -0.71
TMEM260-206ENST00000555046 GNG11P61952 73 aa10.64□□□□□ -0.71
TMEM260-206ENST00000555046 IRX4P78413 519 aa10.64□□□□□ -0.71
TMEM260-206ENST00000555046 SKOR1P84550 965 aa10.64□□□□□ -0.71
TMEM260-206ENST00000555046 CDK18Q07002 472 aa10.64□□□□□ -0.71
TMEM260-206ENST00000555046 NIPAL4Q0D2K0 466 aa10.64□□□□□ -0.71
TMEM260-206ENST00000555046 WASHC5Q12768 1159 aa10.64□□□□□ -0.71
TMEM260-206ENST00000555046 PTK2BQ14289 1009 aa10.64□□□□□ -0.71
TMEM260-206ENST00000555046 SUZ12Q15022 739 aaKnown RBP10.64□□□□□ -0.71
TMEM260-206ENST00000555046 AGERQ15109 404 aa10.64□□□□□ -0.71
TMEM260-206ENST00000555046 PARP6Q2NL67 630 aa10.64□□□□□ -0.71
TMEM260-206ENST00000555046 P3H1Q32P28 736 aa10.64□□□□□ -0.71
TMEM260-206ENST00000555046 HS1BP3Q53T59 392 aa10.64□□□□□ -0.71
TMEM260-206ENST00000555046 AADACL2Q6P093 401 aa10.64□□□□□ -0.71
TMEM260-206ENST00000555046 DRICH1Q6PGQ1 229 aaPredicted RBP10.64□□□□□ -0.71
TMEM260-206ENST00000555046 DPPA4Q7L190 304 aa10.64□□□□□ -0.71
TMEM260-206ENST00000555046 ZCCHC9Q8N567 271 aaKnown RBP10.64□□□□□ -0.71
TMEM260-206ENST00000555046 OXR1Q8N573 874 aa10.64□□□□□ -0.71
TMEM260-206ENST00000555046 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP10.64□□□□□ -0.71
TMEM260-206ENST00000555046 CCHCR1Q8TD31 782 aa10.64□□□□□ -0.71
TMEM260-206ENST00000555046 PIH1D2Q8WWB5 315 aa10.64□□□□□ -0.71
TMEM260-206ENST00000555046 TRIM44Q96DX7 344 aaPredicted RBP10.64□□□□□ -0.71
TMEM260-206ENST00000555046 SPATA13Q96N96 652 aa10.64□□□□□ -0.71
TMEM260-206ENST00000555046 TDRD1Q9BXT4 1180 aaKnown RBP10.64□□□□□ -0.71
TMEM260-206ENST00000555046 ERVMER34-1Q9H9K5 563 aa10.64□□□□□ -0.71
TMEM260-206ENST00000555046 CAPN10Q9HC96 672 aa10.64□□□□□ -0.71
TMEM260-206ENST00000555046 RAD18Q9NS91 495 aa10.64□□□□□ -0.71
TMEM260-206ENST00000555046 RSPH14Q9UHP6 348 aa10.64□□□□□ -0.71
TMEM260-206ENST00000555046 TTC7AQ9ULT0 858 aaPredicted RBP10.64□□□□□ -0.71
TMEM260-206ENST00000555046 SPTAN1Q13813 2472 aaKnown RBP10.64□□□□□ -0.71
TMEM260-206ENST00000555046 CKAP5Q14008 2032 aa10.63□□□□□ -0.71
TMEM260-206ENST00000555046 NUP205Q92621 2012 aa10.63□□□□□ -0.71
TMEM260-206ENST00000555046 GOLGA6L10A0A0M3HER8 536 aa10.63□□□□□ -0.71
TMEM260-206ENST00000555046 CTAGE9A4FU28 777 aa10.63□□□□□ -0.71
TMEM260-206ENST00000555046 RGSL1A5PLK6 1076 aa10.63□□□□□ -0.71
TMEM260-206ENST00000555046 ANKRD66B4E2M5 251 aa10.63□□□□□ -0.71
TMEM260-206ENST00000555046 PDE2AO00408 941 aaPredicted RBP10.63□□□□□ -0.71
TMEM260-206ENST00000555046 ENC1O14682 589 aa10.63□□□□□ -0.71
TMEM260-206ENST00000555046 YKT6O15498 198 aa10.63□□□□□ -0.71
TMEM260-206ENST00000555046 FZD6O60353 706 aa10.63□□□□□ -0.71
TMEM260-206ENST00000555046 CER1O95813 267 aa10.63□□□□□ -0.71
TMEM260-206ENST00000555046 ITGAVP06756 1048 aa10.63□□□□□ -0.71
TMEM260-206ENST00000555046 VIPR1P32241 457 aa10.63□□□□□ -0.71
TMEM260-206ENST00000555046 ABL2P42684 1182 aa10.63□□□□□ -0.71
TMEM260-206ENST00000555046 RABIFP47224 123 aa10.63□□□□□ -0.71
TMEM260-206ENST00000555046 PPP2CBP62714 309 aa10.63□□□□□ -0.71
TMEM260-206ENST00000555046 PPP2CAP67775 309 aa10.63□□□□□ -0.71
TMEM260-206ENST00000555046 TRAF2Q12933 501 aa10.63□□□□□ -0.71
TMEM260-206ENST00000555046 SLC14A1Q13336 389 aa10.63□□□□□ -0.71
TMEM260-206ENST00000555046 LRRC14Q15048 493 aa10.63□□□□□ -0.71
TMEM260-206ENST00000555046 ANKRD20A2Q5SQ80 823 aa10.63□□□□□ -0.71
TMEM260-206ENST00000555046 ANKRD20A1Q5TYW2 823 aa10.63□□□□□ -0.71
TMEM260-206ENST00000555046 ANKRD20A3Q5VUR7 823 aa10.63□□□□□ -0.71
TMEM260-206ENST00000555046 SEL1L3Q68CR1 1132 aa10.63□□□□□ -0.71
TMEM260-206ENST00000555046 ARHGEF18Q6ZSZ5 1173 aa10.63□□□□□ -0.71
TMEM260-206ENST00000555046 PDZD3Q86UT5 571 aa10.63□□□□□ -0.71
TMEM260-206ENST00000555046 ZNF567Q8N184 647 aa10.63□□□□□ -0.71
TMEM260-206ENST00000555046 SLC35F6Q8N357 371 aa10.63□□□□□ -0.71
TMEM260-206ENST00000555046 CCDC89Q8N998 374 aa10.63□□□□□ -0.71
TMEM260-206ENST00000555046 FAM71DQ8N9W8 422 aa10.63□□□□□ -0.71
TMEM260-206ENST00000555046 ATL2Q8NHH9 583 aa10.63□□□□□ -0.71
TMEM260-206ENST00000555046 SLC35B2Q8TB61 432 aa10.63□□□□□ -0.71
TMEM260-206ENST00000555046 LRRN4Q8WUT4 740 aa10.63□□□□□ -0.71
TMEM260-206ENST00000555046 VOPP1Q96AW1 172 aa10.63□□□□□ -0.71
TMEM260-206ENST00000555046 LYSMD1Q96S90 227 aa10.63□□□□□ -0.71
TMEM260-206ENST00000555046 RBM15Q96T37 977 aaKnown RBP eCLIP10.63□□□□□ -0.71
TMEM260-206ENST00000555046 FSD1LQ9BXM9 530 aa10.63□□□□□ -0.71
TMEM260-206ENST00000555046 CDH19Q9H159 772 aa10.63□□□□□ -0.71
TMEM260-206ENST00000555046 USP29Q9HBJ7 922 aa10.63□□□□□ -0.71
TMEM260-206ENST00000555046 MAGEE1Q9HCI5 957 aa10.63□□□□□ -0.71
TMEM260-206ENST00000555046 GDF3Q9NR23 364 aa10.63□□□□□ -0.71
TMEM260-206ENST00000555046 RNF14Q9UBS8 474 aa10.63□□□□□ -0.71
TMEM260-206ENST00000555046 ZFR2Q9UPR6 939 aaKnown RBP10.63□□□□□ -0.71
TMEM260-206ENST00000555046 WASF3Q9UPY6 502 aa10.63□□□□□ -0.71
TMEM260-206ENST00000555046 CHKBQ9Y259 395 aa10.63□□□□□ -0.71
TMEM260-206ENST00000555046 ANKRD6Q9Y2G4 727 aa10.63□□□□□ -0.71
TMEM260-206ENST00000555046 ABCA7Q8IZY2 2146 aa10.63□□□□□ -0.71
TMEM260-206ENST00000555046 A0A0J9YYE9 177 aa10.62□□□□□ -0.71
TMEM260-206ENST00000555046 A6NNZ2 444 aa10.62□□□□□ -0.71
TMEM260-206ENST00000555046 WNT9AO14904 365 aa10.62□□□□□ -0.71
TMEM260-206ENST00000555046 LIASO43766 372 aa10.62□□□□□ -0.71
TMEM260-206ENST00000555046 PMPCBO75439 489 aa10.62□□□□□ -0.71
TMEM260-206ENST00000555046 NDST3O95803 873 aa10.62□□□□□ -0.71
TMEM260-206ENST00000555046 TRBC1P01850 177 aa10.62□□□□□ -0.71
TMEM260-206ENST00000555046 TUBB4AP04350 444 aa10.62□□□□□ -0.71
TMEM260-206ENST00000555046 PYGLP06737 847 aa10.62□□□□□ -0.71
TMEM260-206ENST00000555046 MMP2P08253 660 aa10.62□□□□□ -0.71
TMEM260-206ENST00000555046 ENGP17813 658 aa10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms