RNA–Protein interactions for RNA: ENST00000554877.1

CCDC85C-202, Transcript of coiled-coil domain containing 85C, humanhuman

TSL 4

Gene CCDC85C, Length 543 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC85C-202ENST00000554877 RAD9BQ6WBX8 426 aa12.36□□□□□ -0.43
CCDC85C-202ENST00000554877 DPPA4Q7L190 304 aa12.36□□□□□ -0.43
CCDC85C-202ENST00000554877 TAF8Q7Z7C8 310 aa12.36□□□□□ -0.43
CCDC85C-202ENST00000554877 SLC35F3Q8IY50 421 aa12.36□□□□□ -0.43
CCDC85C-202ENST00000554877 DCBLD1Q8N8Z6 715 aa12.36□□□□□ -0.43
CCDC85C-202ENST00000554877 Q8N9G6 341 aaPredicted RBP12.36□□□□□ -0.43
CCDC85C-202ENST00000554877 FAM181AQ8N9Y4 354 aa12.36□□□□□ -0.43
CCDC85C-202ENST00000554877 SLC35G2Q8TBE7 412 aa12.36□□□□□ -0.43
CCDC85C-202ENST00000554877 CCDC42Q96M95 316 aa12.36□□□□□ -0.43
CCDC85C-202ENST00000554877 WDR92Q96MX6 357 aa12.36□□□□□ -0.43
CCDC85C-202ENST00000554877 ZNF599Q96NL3 588 aa12.36□□□□□ -0.43
CCDC85C-202ENST00000554877 PSKH2Q96QS6 385 aa12.36□□□□□ -0.43
CCDC85C-202ENST00000554877 MRPL40Q9NQ50 206 aaKnown RBP12.36□□□□□ -0.43
CCDC85C-202ENST00000554877 ZNHIT6Q9NWK9 470 aaKnown RBP12.36□□□□□ -0.43
CCDC85C-202ENST00000554877 DKK4Q9UBT3 224 aa12.36□□□□□ -0.43
CCDC85C-202ENST00000554877 B4GALT6Q9UBX8 382 aa12.36□□□□□ -0.43
CCDC85C-202ENST00000554877 COL5A1P20908 1838 aaPredicted RBP12.36□□□□□ -0.43
CCDC85C-202ENST00000554877 SOWAHDA6NJG2 315 aa12.35□□□□□ -0.43
CCDC85C-202ENST00000554877 LMO7DNF2Z398 122 aa12.35□□□□□ -0.43
CCDC85C-202ENST00000554877 TRAFD1O14545 582 aaPredicted RBP12.35□□□□□ -0.43
CCDC85C-202ENST00000554877 TOR1BO14657 336 aa12.35□□□□□ -0.43
CCDC85C-202ENST00000554877 TPP1O14773 563 aa12.35□□□□□ -0.43
CCDC85C-202ENST00000554877 MAFKO60675 156 aa12.35□□□□□ -0.43
CCDC85C-202ENST00000554877 ALPIP09923 528 aa12.35□□□□□ -0.43
CCDC85C-202ENST00000554877 SERPINB6P35237 376 aa12.35□□□□□ -0.43
CCDC85C-202ENST00000554877 ACTN2P35609 894 aa12.35□□□□□ -0.43
CCDC85C-202ENST00000554877 PEX5P50542 639 aa12.35□□□□□ -0.43
CCDC85C-202ENST00000554877 GABREP78334 506 aa12.35□□□□□ -0.43
CCDC85C-202ENST00000554877 RALGDSQ12967 914 aa12.35□□□□□ -0.43
CCDC85C-202ENST00000554877 MTM1Q13496 603 aa12.35□□□□□ -0.43
CCDC85C-202ENST00000554877 RTP5Q14D33 572 aa12.35□□□□□ -0.43
CCDC85C-202ENST00000554877 C3orf38Q5JPI3 329 aa12.35□□□□□ -0.43
CCDC85C-202ENST00000554877 KCTD16Q68DU8 428 aa12.35□□□□□ -0.43
CCDC85C-202ENST00000554877 GKN2Q86XP6 184 aa12.35□□□□□ -0.43
CCDC85C-202ENST00000554877 CCDC170Q8IYT3 715 aa12.35□□□□□ -0.43
CCDC85C-202ENST00000554877 CCNYQ8ND76 341 aa12.35□□□□□ -0.43
CCDC85C-202ENST00000554877 ATL2Q8NHH9 583 aa12.35□□□□□ -0.43
CCDC85C-202ENST00000554877 PCDH19Q8TAB3 1148 aa12.35□□□□□ -0.43
CCDC85C-202ENST00000554877 CTNNBL1Q8WYA6 563 aaPredicted RBP12.35□□□□□ -0.43
CCDC85C-202ENST00000554877 RFFLQ8WZ73 363 aa12.35□□□□□ -0.43
CCDC85C-202ENST00000554877 OR1E3Q8WZA6 343 aa12.35□□□□□ -0.43
CCDC85C-202ENST00000554877 FGF11Q92914 225 aa12.35□□□□□ -0.43
CCDC85C-202ENST00000554877 FUBP1Q96AE4 644 aaKnown RBP12.35□□□□□ -0.43
CCDC85C-202ENST00000554877 NUDCD1Q96RS6 583 aa12.35□□□□□ -0.43
CCDC85C-202ENST00000554877 CCDC3Q9BQI4 270 aa12.35□□□□□ -0.43
CCDC85C-202ENST00000554877 LGR4Q9BXB1 951 aa12.35□□□□□ -0.43
CCDC85C-202ENST00000554877 USP29Q9HBJ7 922 aa12.35□□□□□ -0.43
CCDC85C-202ENST00000554877 CYP4F12Q9HCS2 524 aa12.35□□□□□ -0.43
CCDC85C-202ENST00000554877 NCKIPSDQ9NZQ3 722 aa12.35□□□□□ -0.43
CCDC85C-202ENST00000554877 ANKRD36A6QL64 1941 aa12.35□□□□□ -0.43
CCDC85C-202ENST00000554877 EME2A4GXA9 379 aaPredicted RBP12.34□□□□□ -0.43
CCDC85C-202ENST00000554877 TMEM202A6NGA9 273 aa12.34□□□□□ -0.43
CCDC85C-202ENST00000554877 MFSD11O43934 449 aa12.34□□□□□ -0.43
CCDC85C-202ENST00000554877 PEX11BO96011 259 aa12.34□□□□□ -0.43
CCDC85C-202ENST00000554877 GP1BAP07359 652 aa12.34□□□□□ -0.43
CCDC85C-202ENST00000554877 CYP2A6P11509 494 aaPredicted RBP12.34□□□□□ -0.43
CCDC85C-202ENST00000554877 VIPR1P32241 457 aa12.34□□□□□ -0.43
CCDC85C-202ENST00000554877 EPHB1P54762 984 aa12.34□□□□□ -0.43
CCDC85C-202ENST00000554877 TRAF2Q12933 501 aa12.34□□□□□ -0.43
CCDC85C-202ENST00000554877 ARHGEF7Q14155 803 aa12.34□□□□□ -0.43
CCDC85C-202ENST00000554877 ANKRD20A8PQ5CZ79 823 aa12.34□□□□□ -0.43
CCDC85C-202ENST00000554877 C6orf132Q5T0Z8 1188 aa12.34□□□□□ -0.43
CCDC85C-202ENST00000554877 ARMC12Q5T9G4 340 aa12.34□□□□□ -0.43
CCDC85C-202ENST00000554877 CDCP2Q5VXM1 449 aa12.34□□□□□ -0.43
CCDC85C-202ENST00000554877 PNCKQ6P2M8 343 aa12.34□□□□□ -0.43
CCDC85C-202ENST00000554877 DOK6Q6PKX4 331 aa12.34□□□□□ -0.43
CCDC85C-202ENST00000554877 PELI3Q8N2H9 469 aa12.34□□□□□ -0.43
CCDC85C-202ENST00000554877 FSTL5Q8N475 847 aaPredicted RBP12.34□□□□□ -0.43
CCDC85C-202ENST00000554877 KYQ8NBH2 561 aa12.34□□□□□ -0.43
CCDC85C-202ENST00000554877 FAM46DQ8NEK8 389 aa12.34□□□□□ -0.43
CCDC85C-202ENST00000554877 OR56A4Q8NGH8 313 aa12.34□□□□□ -0.43
CCDC85C-202ENST00000554877 FAF2Q96CS3 445 aa12.34□□□□□ -0.43
CCDC85C-202ENST00000554877 ECHDC3Q96DC8 303 aa12.34□□□□□ -0.43
CCDC85C-202ENST00000554877 NUS1Q96E22 293 aa12.34□□□□□ -0.43
CCDC85C-202ENST00000554877 PDXPQ96GD0 296 aa12.34□□□□□ -0.43
CCDC85C-202ENST00000554877 ATXN7L3BQ96GX2 97 aa12.34□□□□□ -0.43
CCDC85C-202ENST00000554877 SMIM14Q96QK8 99 aa12.34□□□□□ -0.43
CCDC85C-202ENST00000554877 SEMA3CQ99985 751 aa12.34□□□□□ -0.43
CCDC85C-202ENST00000554877 BOCQ9BWV1 1114 aa12.34□□□□□ -0.43
CCDC85C-202ENST00000554877 RBM22Q9NW64 420 aaKnown RBP eCLIP12.34□□□□□ -0.432e-6■■■■□ 25.8
CCDC85C-202ENST00000554877 IMPACTQ9P2X3 320 aa12.34□□□□□ -0.43
CCDC85C-202ENST00000554877 CD84Q9UIB8 345 aa12.34□□□□□ -0.43
CCDC85C-202ENST00000554877 PHTF1Q9UMS5 762 aa12.34□□□□□ -0.43
CCDC85C-202ENST00000554877 TFR2Q9UP52 801 aa12.34□□□□□ -0.43
CCDC85C-202ENST00000554877 RAI2Q9Y5P3 530 aa12.34□□□□□ -0.43
CCDC85C-202ENST00000554877 CHD6Q8TD26 2715 aa12.33□□□□□ -0.44
CCDC85C-202ENST00000554877 SPEGQ15772 3267 aa12.33□□□□□ -0.44
CCDC85C-202ENST00000554877 APC2O95996 2303 aa12.33□□□□□ -0.44
CCDC85C-202ENST00000554877 ACACAQ13085 2346 aa12.33□□□□□ -0.44
CCDC85C-202ENST00000554877 DMXL2Q8TDJ6 3036 aa12.33□□□□□ -0.44
CCDC85C-202ENST00000554877 SHROOM3Q8TF72 1996 aa12.33□□□□□ -0.44
CCDC85C-202ENST00000554877 C3orf70A6NLC5 250 aaPredicted RBP12.33□□□□□ -0.44
CCDC85C-202ENST00000554877 EIF4E1BA6NMX2 242 aaKnown RBP12.33□□□□□ -0.44
CCDC85C-202ENST00000554877 B4DGG1 531 aa12.33□□□□□ -0.44
CCDC85C-202ENST00000554877 NDUFA10O95299 355 aa12.33□□□□□ -0.44
CCDC85C-202ENST00000554877 PDHA1P08559 390 aa12.33□□□□□ -0.44
CCDC85C-202ENST00000554877 NFKBIAP25963 317 aa12.33□□□□□ -0.44
CCDC85C-202ENST00000554877 RBMS1P29558 406 aaKnown RBP12.33□□□□□ -0.44
CCDC85C-202ENST00000554877 HSPA9P38646 679 aaKnown RBP12.33□□□□□ -0.44
CCDC85C-202ENST00000554877 ETV3P41162 512 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms