RNA–Protein interactions for RNA: ENST00000554803.5

SRP54-205, Transcript of signal recognition particle 54, humanhuman

TSL 4

Gene SRP54, Length 572 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-205ENST00000554803 TMLHEQ9NVH6 421 aa11.23□□□□□ -0.61
SRP54-205ENST00000554803 TXNDC16Q9P2K2 825 aa11.23□□□□□ -0.61
SRP54-205ENST00000554803 SAE1Q9UBE0 346 aaPredicted RBP11.23□□□□□ -0.61
SRP54-205ENST00000554803 TSPAN16Q9UKR8 245 aa11.23□□□□□ -0.61
SRP54-205ENST00000554803 PRPF19Q9UMS4 504 aaKnown RBP11.23□□□□□ -0.61
SRP54-205ENST00000554803 HELZP42694 1942 aaKnown RBP11.23□□□□□ -0.61
SRP54-205ENST00000554803 USP9XQ93008 2570 aaPredicted RBP11.23□□□□□ -0.61
SRP54-205ENST00000554803 FAM237BA0A1B0GVD1 139 aa11.22□□□□□ -0.61
SRP54-205ENST00000554803 DPPA5A6NC42 116 aa11.22□□□□□ -0.61
SRP54-205ENST00000554803 SLCO1B7G3V0H7 640 aa11.22□□□□□ -0.61
SRP54-205ENST00000554803 H0Y3Z8 333 aa11.22□□□□□ -0.61
SRP54-205ENST00000554803 H3BRJ5 948 aa11.22□□□□□ -0.61
SRP54-205ENST00000554803 TK2O00142 265 aa11.22□□□□□ -0.61
SRP54-205ENST00000554803 CLDN5O00501 218 aa11.22□□□□□ -0.61
SRP54-205ENST00000554803 SMIM24O75264 130 aa11.22□□□□□ -0.61
SRP54-205ENST00000554803 KRT36O76013 467 aa11.22□□□□□ -0.61
SRP54-205ENST00000554803 MPOP05164 745 aa11.22□□□□□ -0.61
SRP54-205ENST00000554803 PTPN1P18031 435 aaKnown RBP11.22□□□□□ -0.61
SRP54-205ENST00000554803 BCKDHBP21953 392 aa11.22□□□□□ -0.61
SRP54-205ENST00000554803 IL4RP24394 825 aa11.22□□□□□ -0.61
SRP54-205ENST00000554803 CYP2F1P24903 491 aa11.22□□□□□ -0.61
SRP54-205ENST00000554803 RBL1P28749 1068 aa11.22□□□□□ -0.61
SRP54-205ENST00000554803 WEE1P30291 646 aa11.22□□□□□ -0.61
SRP54-205ENST00000554803 L1CAMP32004 1257 aa11.22□□□□□ -0.61
SRP54-205ENST00000554803 DHPSP49366 369 aaPredicted RBP11.22□□□□□ -0.61
SRP54-205ENST00000554803 HARS2P49590 506 aaKnown RBP11.22□□□□□ -0.61
SRP54-205ENST00000554803 KNTC1P50748 2209 aa11.22□□□□□ -0.61
SRP54-205ENST00000554803 PAPOLAP51003 745 aaKnown RBP11.22□□□□□ -0.61
SRP54-205ENST00000554803 BCAT1P54687 386 aa11.22□□□□□ -0.61
SRP54-205ENST00000554803 AQP5P55064 265 aa11.22□□□□□ -0.61
SRP54-205ENST00000554803 YWHAHQ04917 246 aaPredicted RBP11.22□□□□□ -0.61
SRP54-205ENST00000554803 NIPAL4Q0D2K0 466 aa11.22□□□□□ -0.61
SRP54-205ENST00000554803 ASPHQ12797 758 aa11.22□□□□□ -0.61
SRP54-205ENST00000554803 PLD1Q13393 1074 aa11.22□□□□□ -0.61
SRP54-205ENST00000554803 DMC1Q14565 340 aa11.22□□□□□ -0.61
SRP54-205ENST00000554803 GOLGA7BQ2TAP0 167 aa11.22□□□□□ -0.61
SRP54-205ENST00000554803 FBXO43Q4G163 708 aa11.22□□□□□ -0.61
SRP54-205ENST00000554803 USP39Q53GS9 565 aaKnown RBP11.22□□□□□ -0.61
SRP54-205ENST00000554803 INTS6LQ5JSJ4 861 aaKnown RBP11.22□□□□□ -0.61
SRP54-205ENST00000554803 SH2D4BQ5SQS7 431 aa11.22□□□□□ -0.61
SRP54-205ENST00000554803 OR52E8Q6IFG1 317 aa11.22□□□□□ -0.61
SRP54-205ENST00000554803 LRRTM3Q86VH5 581 aa11.22□□□□□ -0.61
SRP54-205ENST00000554803 ST13P4Q8IZP2 240 aaPredicted RBP11.22□□□□□ -0.61
SRP54-205ENST00000554803 RBM15BQ8NDT2 890 aaKnown RBP11.22□□□□□ -0.61
SRP54-205ENST00000554803 RPLP0P6Q8NHW5 317 aa11.22□□□□□ -0.61
SRP54-205ENST00000554803 ACTRT2Q8TDY3 377 aa11.22□□□□□ -0.61
SRP54-205ENST00000554803 FAM172AQ8WUF8 416 aa11.22□□□□□ -0.61
SRP54-205ENST00000554803 TFB1MQ8WVM0 346 aaKnown RBP11.22□□□□□ -0.61
SRP54-205ENST00000554803 ADAMTS14Q8WXS8 1223 aa11.22□□□□□ -0.61
SRP54-205ENST00000554803 IFT43Q96FT9 208 aa11.22□□□□□ -0.61
SRP54-205ENST00000554803 RILPQ96NA2 401 aa11.22□□□□□ -0.61
SRP54-205ENST00000554803 SERPINI1Q99574 410 aa11.22□□□□□ -0.61
SRP54-205ENST00000554803 FAM167BQ9BTA0 163 aa11.22□□□□□ -0.61
SRP54-205ENST00000554803 SNRNP25Q9BV90 132 aaKnown RBP11.22□□□□□ -0.61
SRP54-205ENST00000554803 EPB41L1Q9H4G0 881 aa11.22□□□□□ -0.61
SRP54-205ENST00000554803 Q9H521 79 aa11.22□□□□□ -0.61
SRP54-205ENST00000554803 MRM3Q9HC36 420 aaKnown RBP11.22□□□□□ -0.61
SRP54-205ENST00000554803 ARHGEF4Q9NR80 690 aa11.22□□□□□ -0.61
SRP54-205ENST00000554803 HSFX1Q9UBD0 423 aa11.22□□□□□ -0.61
SRP54-205ENST00000554803 DSEQ9UL01 958 aa11.22□□□□□ -0.61
SRP54-205ENST00000554803 CDH9Q9ULB4 789 aa11.22□□□□□ -0.61
SRP54-205ENST00000554803 INVSQ9Y283 1065 aa11.22□□□□□ -0.61
SRP54-205ENST00000554803 YIPF1Q9Y548 306 aa11.22□□□□□ -0.61
SRP54-205ENST00000554803 OR6C75A6NL08 312 aa11.21□□□□□ -0.61
SRP54-205ENST00000554803 ENO4A6NNW6 628 aa11.21□□□□□ -0.61
SRP54-205ENST00000554803 E5RJQ4 531 aa11.21□□□□□ -0.61
SRP54-205ENST00000554803 PSMD3O43242 534 aa11.21□□□□□ -0.61
SRP54-205ENST00000554803 PLIN3O60664 434 aa11.21□□□□□ -0.61
SRP54-205ENST00000554803 PRAMEF12O95522 483 aa11.21□□□□□ -0.61
SRP54-205ENST00000554803 POLBP06746 335 aa11.21□□□□□ -0.61
SRP54-205ENST00000554803 DRD1P21728 446 aa11.21□□□□□ -0.61
SRP54-205ENST00000554803 ADORA2BP29275 332 aa11.21□□□□□ -0.61
SRP54-205ENST00000554803 SPRP35270 261 aaPredicted RBP11.21□□□□□ -0.61
SRP54-205ENST00000554803 GP5P40197 560 aa11.21□□□□□ -0.61
SRP54-205ENST00000554803 MAGEA12P43365 314 aa11.21□□□□□ -0.61
SRP54-205ENST00000554803 SERPINB8P50452 374 aa11.21□□□□□ -0.61
SRP54-205ENST00000554803 CSE1LP55060 971 aaKnown RBP11.21□□□□□ -0.61
SRP54-205ENST00000554803 GAD2Q05329 585 aa11.21□□□□□ -0.61
SRP54-205ENST00000554803 BST2Q10589 180 aaKnown RBP11.21□□□□□ -0.61
SRP54-205ENST00000554803 FASTKD1Q53R41 847 aaKnown RBP11.21□□□□□ -0.61
SRP54-205ENST00000554803 C1orf146Q5VVC0 180 aa11.21□□□□□ -0.61
SRP54-205ENST00000554803 MBLAC2Q68D91 279 aa11.21□□□□□ -0.61
SRP54-205ENST00000554803 ZFP1Q6P2D0 407 aa11.21□□□□□ -0.61
SRP54-205ENST00000554803 RFWD3Q6PCD5 774 aa11.21□□□□□ -0.61
SRP54-205ENST00000554803 SLC23A3Q6PIS1 610 aa11.21□□□□□ -0.61
SRP54-205ENST00000554803 RIPOR1Q6ZS17 1223 aa11.21□□□□□ -0.61
SRP54-205ENST00000554803 PAQR9Q6ZVX9 377 aa11.21□□□□□ -0.61
SRP54-205ENST00000554803 TTC30AQ86WT1 665 aa11.21□□□□□ -0.61
SRP54-205ENST00000554803 ALDH16A1Q8IZ83 802 aa11.21□□□□□ -0.61
SRP54-205ENST00000554803 UBA3Q8TBC4 463 aa11.21□□□□□ -0.61
SRP54-205ENST00000554803 SLC2A14Q8TDB8 520 aa11.21□□□□□ -0.61
SRP54-205ENST00000554803 SLC35F5Q8WV83 523 aa11.21□□□□□ -0.61
SRP54-205ENST00000554803 HTR3CQ8WXA8 447 aa11.21□□□□□ -0.61
SRP54-205ENST00000554803 SLC39A7Q92504 469 aa11.21□□□□□ -0.61
SRP54-205ENST00000554803 MYLPFQ96A32 169 aa11.21□□□□□ -0.61
SRP54-205ENST00000554803 ACDQ96AP0 544 aa11.21□□□□□ -0.61
SRP54-205ENST00000554803 TNIP3Q96KP6 325 aa11.21□□□□□ -0.61
SRP54-205ENST00000554803 GBP5Q96PP8 586 aa11.21□□□□□ -0.61
SRP54-205ENST00000554803 VAT1Q99536 393 aa11.21□□□□□ -0.61
SRP54-205ENST00000554803 KLF6Q99612 283 aaPredicted RBP11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms