RNA–Protein interactions for RNA: ENST00000554785.1

PRPF39-208, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 2

Gene PRPF39, Length 2,121 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-208ENST00000554785 SLC44A5Q8NCS7 719 aa1.61□□□□□ -2.15
PRPF39-208ENST00000554785 DNAAF1Q8NEP3 725 aa1.61□□□□□ -2.15
PRPF39-208ENST00000554785 NFKBIDQ8NI38 313 aa1.61□□□□□ -2.15
PRPF39-208ENST00000554785 PIGOQ8TEQ8 1089 aa1.61□□□□□ -2.15
PRPF39-208ENST00000554785 HDAC7Q8WUI4 952 aa1.61□□□□□ -2.15
PRPF39-208ENST00000554785 ZNF419Q96HQ0 510 aaPredicted RBP1.61□□□□□ -2.15
PRPF39-208ENST00000554785 WDR83Q9BRX9 315 aaKnown RBP1.61□□□□□ -2.15
PRPF39-208ENST00000554785 AAMDCQ9H7C9 122 aa1.61□□□□□ -2.15
PRPF39-208ENST00000554785 ATP8A2Q9NTI2 1148 aa1.61□□□□□ -2.15
PRPF39-208ENST00000554785 OLA1Q9NTK5 396 aaKnown RBP1.61□□□□□ -2.15
PRPF39-208ENST00000554785 ZBTB40Q9NUA8 1239 aa1.61□□□□□ -2.15
PRPF39-208ENST00000554785 ZDHHC7Q9NXF8 308 aa1.61□□□□□ -2.15
PRPF39-208ENST00000554785 GRHL1Q9NZI5 618 aa1.61□□□□□ -2.15
PRPF39-208ENST00000554785 KCND2Q9NZV8 630 aa1.61□□□□□ -2.15
PRPF39-208ENST00000554785 PEMTQ9UBM1 199 aa1.61□□□□□ -2.15
PRPF39-208ENST00000554785 AASSQ9UDR5 926 aa1.61□□□□□ -2.15
PRPF39-208ENST00000554785 ZNF580Q9UK33 172 aa1.61□□□□□ -2.15
PRPF39-208ENST00000554785 AGO2Q9UKV8 859 aaKnown RBP1.61□□□□□ -2.15
PRPF39-208ENST00000554785 CAMK2AQ9UQM7 478 aa1.61□□□□□ -2.15
PRPF39-208ENST00000554785 KTN1Q86UP2 1357 aaKnown RBP1.61□□□□□ -2.15
PRPF39-208ENST00000554785 LAMB4A4D0S4 1761 aa1.61□□□□□ -2.15
PRPF39-208ENST00000554785 ZNF541Q9H0D2 1346 aa1.61□□□□□ -2.15
PRPF39-208ENST00000554785 REV3LO60673 3130 aa1.61□□□□□ -2.15
PRPF39-208ENST00000554785 CACNA1GO43497 2377 aa1.61□□□□□ -2.15
PRPF39-208ENST00000554785 SCN4AP35499 1836 aa1.61□□□□□ -2.15
PRPF39-208ENST00000554785 A0A0A0MQY5 61 aa1.61□□□□□ -2.15
PRPF39-208ENST00000554785 A0A1W2PPC1 479 aa1.61□□□□□ -2.15
PRPF39-208ENST00000554785 ARHGAP10A1A4S6 786 aa1.61□□□□□ -2.15
PRPF39-208ENST00000554785 CD8B2A6NJW9 211 aa1.61□□□□□ -2.15
PRPF39-208ENST00000554785 FAM157AC9JC47 383 aa1.61□□□□□ -2.15
PRPF39-208ENST00000554785 KRT86O43790 486 aa1.61□□□□□ -2.15
PRPF39-208ENST00000554785 KIF1CO43896 1103 aaKnown RBP1.61□□□□□ -2.15
PRPF39-208ENST00000554785 CNOT3O75175 753 aaKnown RBP1.61□□□□□ -2.15
PRPF39-208ENST00000554785 BAIAP3O94812 1187 aa1.61□□□□□ -2.15
PRPF39-208ENST00000554785 TMEM63AO94886 807 aa1.61□□□□□ -2.15
PRPF39-208ENST00000554785 ALPLP05186 524 aa1.61□□□□□ -2.15
PRPF39-208ENST00000554785 UBL4AP11441 157 aa1.61□□□□□ -2.15
PRPF39-208ENST00000554785 YWHAQP27348 245 aa1.61□□□□□ -2.15
PRPF39-208ENST00000554785 EPHA8P29322 1005 aaPredicted RBP1.61□□□□□ -2.15
PRPF39-208ENST00000554785 MAN1A1P33908 653 aa1.61□□□□□ -2.15
PRPF39-208ENST00000554785 ARL1P40616 181 aaPredicted RBP1.61□□□□□ -2.15
PRPF39-208ENST00000554785 RXRGP48443 463 aa1.61□□□□□ -2.15
PRPF39-208ENST00000554785 AMPHP49418 695 aa1.61□□□□□ -2.15
PRPF39-208ENST00000554785 PLCD1P51178 756 aa1.61□□□□□ -2.15
PRPF39-208ENST00000554785 BLKP51451 505 aa1.61□□□□□ -2.15
PRPF39-208ENST00000554785 CCR9P51686 369 aa1.61□□□□□ -2.15
PRPF39-208ENST00000554785 CLCNKBP51801 687 aa1.61□□□□□ -2.15
PRPF39-208ENST00000554785 UFM1P61960 85 aa1.61□□□□□ -2.15
PRPF39-208ENST00000554785 TMF1P82094 1093 aa1.61□□□□□ -2.15
PRPF39-208ENST00000554785 CYP4A11Q02928 519 aa1.61□□□□□ -2.15
PRPF39-208ENST00000554785 SRSF1Q07955 248 aaKnown RBP eCLIP1.61□□□□□ -2.15
PRPF39-208ENST00000554785 DDR1Q08345 913 aa1.61□□□□□ -2.15
PRPF39-208ENST00000554785 MTX1Q13505 466 aa1.61□□□□□ -2.15
PRPF39-208ENST00000554785 KRT81Q14533 505 aa1.61□□□□□ -2.15
PRPF39-208ENST00000554785 RPE65Q16518 533 aa1.61□□□□□ -2.15
PRPF39-208ENST00000554785 TSTQ16762 297 aaKnown RBP1.61□□□□□ -2.15
PRPF39-208ENST00000554785 SMTNL2Q2TAL5 461 aa1.61□□□□□ -2.15
PRPF39-208ENST00000554785 EDRF1Q3B7T1 1238 aa1.61□□□□□ -2.15
PRPF39-208ENST00000554785 ODF3L2Q3SX64 289 aa1.61□□□□□ -2.15
PRPF39-208ENST00000554785 SYTL3Q4VX76 610 aa1.61□□□□□ -2.15
PRPF39-208ENST00000554785 ZNF667Q5HYK9 610 aa1.61□□□□□ -2.15
PRPF39-208ENST00000554785 ENTPD8Q5MY95 495 aa1.61□□□□□ -2.15
PRPF39-208ENST00000554785 PIK3CD-AS1Q5SR53 167 aa1.61□□□□□ -2.15
PRPF39-208ENST00000554785 C6orf10Q5SRN2 563 aa1.61□□□□□ -2.15
PRPF39-208ENST00000554785 HMBOX1Q6NT76 420 aa1.61□□□□□ -2.15
PRPF39-208ENST00000554785 TMEM81Q6P7N7 255 aa1.61□□□□□ -2.15
PRPF39-208ENST00000554785 INO80CQ6PI98 192 aaPredicted RBP1.61□□□□□ -2.15
PRPF39-208ENST00000554785 ATF7IPQ6VMQ6 1270 aa1.61□□□□□ -2.15
PRPF39-208ENST00000554785 RRM2BQ7LG56 351 aa1.61□□□□□ -2.15
PRPF39-208ENST00000554785 KDELC2Q7Z4H8 507 aa1.61□□□□□ -2.15
PRPF39-208ENST00000554785 MRPL10Q7Z7H8 261 aaKnown RBP1.61□□□□□ -2.15
PRPF39-208ENST00000554785 TBC1D1Q86TI0 1168 aaPredicted RBP1.61□□□□□ -2.15
PRPF39-208ENST00000554785 ANKRD13BQ86YJ7 626 aa1.61□□□□□ -2.15
PRPF39-208ENST00000554785 ZDHHC17Q8IUH5 632 aa1.61□□□□□ -2.15
PRPF39-208ENST00000554785 FAM185AQ8N0U4 392 aa1.61□□□□□ -2.15
PRPF39-208ENST00000554785 CNTROBQ8N137 903 aa1.61□□□□□ -2.15
PRPF39-208ENST00000554785 SLC25A41Q8N5S1 370 aa1.61□□□□□ -2.15
PRPF39-208ENST00000554785 DPP10Q8N608 796 aa1.61□□□□□ -2.15
PRPF39-208ENST00000554785 PLD5Q8N7P1 536 aa1.61□□□□□ -2.15
PRPF39-208ENST00000554785 KCNH5Q8NCM2 988 aa1.61□□□□□ -2.15
PRPF39-208ENST00000554785 CMASQ8NFW8 434 aaPredicted RBP1.61□□□□□ -2.15
PRPF39-208ENST00000554785 TDRD7Q8NHU6 1098 aaKnown RBP1.61□□□□□ -2.15
PRPF39-208ENST00000554785 ADAMTS15Q8TE58 950 aa1.61□□□□□ -2.15
PRPF39-208ENST00000554785 UCMAQ8WVF2 138 aa1.61□□□□□ -2.15
PRPF39-208ENST00000554785 PIGBQ92521 554 aa1.61□□□□□ -2.15
PRPF39-208ENST00000554785 CENPIQ92674 756 aaPredicted RBP1.61□□□□□ -2.15
PRPF39-208ENST00000554785 EME1Q96AY2 570 aa1.61□□□□□ -2.15
PRPF39-208ENST00000554785 SAAL1Q96ER3 474 aa1.61□□□□□ -2.15
PRPF39-208ENST00000554785 LBHD1Q9BQE6 289 aaPredicted RBP1.61□□□□□ -2.15
PRPF39-208ENST00000554785 USP44Q9H0E7 712 aa1.61□□□□□ -2.15
PRPF39-208ENST00000554785 SLC25A18Q9H1K4 315 aa1.61□□□□□ -2.15
PRPF39-208ENST00000554785 CXorf56Q9H5V9 222 aa1.61□□□□□ -2.15
PRPF39-208ENST00000554785 SPAG4Q9NPE6 437 aa1.61□□□□□ -2.15
PRPF39-208ENST00000554785 THSD1Q9NS62 852 aa1.61□□□□□ -2.15
PRPF39-208ENST00000554785 RNF146Q9NTX7 359 aa1.61□□□□□ -2.15
PRPF39-208ENST00000554785 BABAM1Q9NWV8 329 aa1.61□□□□□ -2.15
PRPF39-208ENST00000554785 ORC3Q9UBD5 711 aaPredicted RBP1.61□□□□□ -2.15
PRPF39-208ENST00000554785 CDH22Q9UJ99 828 aa1.61□□□□□ -2.15
PRPF39-208ENST00000554785 SARDHQ9UL12 918 aa1.61□□□□□ -2.15
PRPF39-208ENST00000554785 ZMYM2Q9UBW7 1377 aa1.61□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms