RNA–Protein interactions for RNA: ENST00000554079.1

SIX4-202, Transcript of SIX homeobox 4, humanhuman

TSL 1 (best)

Gene SIX4, Length 2,003 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX4-202ENST00000554079 ZNF639Q9UID6 485 aa9.58□□□□□ -0.88
SIX4-202ENST00000554079 MAN2B2Q9Y2E5 1009 aa9.58□□□□□ -0.88
SIX4-202ENST00000554079 SNED1Q8TER0 1413 aa9.58□□□□□ -0.88
SIX4-202ENST00000554079 LINC00862A6NCI5 91 aa9.58□□□□□ -0.88
SIX4-202ENST00000554079 KRT87PA6NCN2 255 aa9.58□□□□□ -0.88
SIX4-202ENST00000554079 TRPC5OSA6NMA1 111 aa9.58□□□□□ -0.88
SIX4-202ENST00000554079 TPP1O14773 563 aa9.58□□□□□ -0.88
SIX4-202ENST00000554079 CHADO15335 359 aa9.58□□□□□ -0.88
SIX4-202ENST00000554079 GRID2O43424 1007 aa9.58□□□□□ -0.88
SIX4-202ENST00000554079 FAM13AO94988 1023 aa9.58□□□□□ -0.88
SIX4-202ENST00000554079 OR5F1O95221 314 aa9.58□□□□□ -0.88
SIX4-202ENST00000554079 HOXB3P14651 431 aaPredicted RBP9.58□□□□□ -0.88
SIX4-202ENST00000554079 IL1R2P27930 398 aa9.58□□□□□ -0.88
SIX4-202ENST00000554079 CDH5P33151 784 aaPredicted RBP9.58□□□□□ -0.88
SIX4-202ENST00000554079 NPY2RP49146 381 aa9.58□□□□□ -0.88
SIX4-202ENST00000554079 NRLP54845 237 aa9.58□□□□□ -0.88
SIX4-202ENST00000554079 TFAMQ00059 246 aaKnown RBP9.58□□□□□ -0.88
SIX4-202ENST00000554079 ENPEPQ07075 957 aa9.58□□□□□ -0.88
SIX4-202ENST00000554079 PIGFQ07326 219 aa9.58□□□□□ -0.88
SIX4-202ENST00000554079 NFE2L1Q14494 772 aa9.58□□□□□ -0.88
SIX4-202ENST00000554079 LRRC8EQ6NSJ5 796 aa9.58□□□□□ -0.88
SIX4-202ENST00000554079 ZNF720Q7Z2F6 126 aa9.58□□□□□ -0.88
SIX4-202ENST00000554079 FAM83AQ86UY5 434 aa9.58□□□□□ -0.88
SIX4-202ENST00000554079 ZNF578Q96N58 590 aaPredicted RBP9.58□□□□□ -0.88
SIX4-202ENST00000554079 CPXM1Q96SM3 734 aa9.58□□□□□ -0.88
SIX4-202ENST00000554079 SH2D3AQ9BRG2 576 aa9.58□□□□□ -0.88
SIX4-202ENST00000554079 ZNF577Q9BSK1 485 aa9.58□□□□□ -0.88
SIX4-202ENST00000554079 NGRNQ9NPE2 291 aaKnown RBP9.58□□□□□ -0.88
SIX4-202ENST00000554079 PRDM11Q9NQV5 511 aa9.58□□□□□ -0.88
SIX4-202ENST00000554079 CACNA2D2Q9NY47 1150 aa9.58□□□□□ -0.88
SIX4-202ENST00000554079 GABBR1Q9UBS5 961 aa9.58□□□□□ -0.88
SIX4-202ENST00000554079 DCDC2Q9UHG0 476 aa9.58□□□□□ -0.88
SIX4-202ENST00000554079 AXIN2Q9Y2T1 843 aa9.58□□□□□ -0.88
SIX4-202ENST00000554079 COL4A1P02462 1669 aa9.58□□□□□ -0.88
SIX4-202ENST00000554079 DHRS12A0PJE2 317 aa9.57□□□□□ -0.88
SIX4-202ENST00000554079 METTL15A6NJ78 407 aa9.57□□□□□ -0.88
SIX4-202ENST00000554079 AQP12BA6NM10 295 aa9.57□□□□□ -0.88
SIX4-202ENST00000554079 H0YC42 278 aa9.57□□□□□ -0.88
SIX4-202ENST00000554079 TLR3O15455 904 aaKnown RBP9.57□□□□□ -0.88
SIX4-202ENST00000554079 OLFM2O95897 454 aa9.57□□□□□ -0.88
SIX4-202ENST00000554079 USP17L8P0C7I0 530 aa9.57□□□□□ -0.88
SIX4-202ENST00000554079 POU3F3P20264 500 aaPredicted RBP9.57□□□□□ -0.88
SIX4-202ENST00000554079 OSBPP22059 807 aa9.57□□□□□ -0.88
SIX4-202ENST00000554079 DNAJB1P25685 340 aa9.57□□□□□ -0.88
SIX4-202ENST00000554079 DSG3P32926 999 aa9.57□□□□□ -0.88
SIX4-202ENST00000554079 TPD52P55327 224 aaPredicted RBP9.57□□□□□ -0.88
SIX4-202ENST00000554079 NCS1P62166 190 aa9.57□□□□□ -0.88
SIX4-202ENST00000554079 LSM3P62310 102 aaKnown RBP9.57□□□□□ -0.88
SIX4-202ENST00000554079 UBE3AQ05086 875 aa9.57□□□□□ -0.88
SIX4-202ENST00000554079 EFR3AQ14156 821 aa9.57□□□□□ -0.88
SIX4-202ENST00000554079 PON2Q15165 354 aa9.57□□□□□ -0.88
SIX4-202ENST00000554079 SAMD4BQ5PRF9 694 aaKnown RBP9.57□□□□□ -0.88
SIX4-202ENST00000554079 LIN9Q5TKA1 542 aa9.57□□□□□ -0.88
SIX4-202ENST00000554079 REP15Q6BDI9 236 aa9.57□□□□□ -0.88
SIX4-202ENST00000554079 ARSKQ6UWY0 536 aa9.57□□□□□ -0.88
SIX4-202ENST00000554079 PLEKHM3Q6ZWE6 761 aa9.57□□□□□ -0.88
SIX4-202ENST00000554079 ZNF677Q86XU0 584 aa9.57□□□□□ -0.88
SIX4-202ENST00000554079 PLCZ1Q86YW0 608 aa9.57□□□□□ -0.88
SIX4-202ENST00000554079 AQP12AQ8IXF9 295 aa9.57□□□□□ -0.88
SIX4-202ENST00000554079 MYCT1Q8N699 235 aa9.57□□□□□ -0.88
SIX4-202ENST00000554079 FLCNQ8NFG4 579 aa9.57□□□□□ -0.88
SIX4-202ENST00000554079 MCFD2Q8NI22 146 aa9.57□□□□□ -0.88
SIX4-202ENST00000554079 HMGCLL1Q8TB92 370 aa9.57□□□□□ -0.88
SIX4-202ENST00000554079 FAR1Q8WVX9 515 aa9.57□□□□□ -0.88
SIX4-202ENST00000554079 SLC7A6Q92536 515 aa9.57□□□□□ -0.88
SIX4-202ENST00000554079 HDAC10Q969S8 669 aa9.57□□□□□ -0.88
SIX4-202ENST00000554079 DYNLL2Q96FJ2 89 aa9.57□□□□□ -0.88
SIX4-202ENST00000554079 FYTTD1Q96QD9 318 aaKnown RBP9.57□□□□□ -0.88
SIX4-202ENST00000554079 SECISBP2Q96T21 854 aaKnown RBP9.57□□□□□ -0.88
SIX4-202ENST00000554079 C11orf70Q9BRQ4 267 aa9.57□□□□□ -0.88
SIX4-202ENST00000554079 MRPL47Q9HD33 250 aaKnown RBP9.57□□□□□ -0.88
SIX4-202ENST00000554079 RANGRFQ9HD47 186 aaPredicted RBP9.57□□□□□ -0.88
SIX4-202ENST00000554079 TUFT1Q9NNX1 390 aa9.57□□□□□ -0.88
SIX4-202ENST00000554079 SPAG4Q9NPE6 437 aa9.57□□□□□ -0.88
SIX4-202ENST00000554079 FANCFQ9NPI8 374 aa9.57□□□□□ -0.88
SIX4-202ENST00000554079 TBC1D13Q9NVG8 400 aa9.57□□□□□ -0.88
SIX4-202ENST00000554079 TAS2R9Q9NYW1 312 aa9.57□□□□□ -0.88
SIX4-202ENST00000554079 USP22Q9UPT9 525 aa9.57□□□□□ -0.88
SIX4-202ENST00000554079 ZNF175Q9Y473 711 aa9.57□□□□□ -0.88
SIX4-202ENST00000554079 KLF2Q9Y5W3 355 aaPredicted RBP9.57□□□□□ -0.88
SIX4-202ENST00000554079 KCNE2Q9Y6J6 123 aa9.57□□□□□ -0.88
SIX4-202ENST00000554079 SLIT2O94813 1529 aa9.57□□□□□ -0.88
SIX4-202ENST00000554079 SLC15A5A6NIM6 579 aa9.56□□□□□ -0.88
SIX4-202ENST00000554079 ZBBXA8MT70 800 aa9.56□□□□□ -0.88
SIX4-202ENST00000554079 ZNF487B1APH4 448 aa9.56□□□□□ -0.88
SIX4-202ENST00000554079 SLC4A1P02730 911 aa9.56□□□□□ -0.88
SIX4-202ENST00000554079 GCP02774 474 aa9.56□□□□□ -0.88
SIX4-202ENST00000554079 ACADMP11310 421 aa9.56□□□□□ -0.88
SIX4-202ENST00000554079 ZNF30P17039 623 aa9.56□□□□□ -0.88
SIX4-202ENST00000554079 CSTF2P33240 577 aaKnown RBP eCLIP9.56□□□□□ -0.88
SIX4-202ENST00000554079 NSFP46459 744 aaKnown RBP9.56□□□□□ -0.88
SIX4-202ENST00000554079 ST13P50502 369 aaKnown RBP9.56□□□□□ -0.88
SIX4-202ENST00000554079 ARHGDIAP52565 204 aa9.56□□□□□ -0.88
SIX4-202ENST00000554079 MAPK12P53778 367 aa9.56□□□□□ -0.88
SIX4-202ENST00000554079 CABP4P57796 275 aa9.56□□□□□ -0.88
SIX4-202ENST00000554079 DYNLT1P63172 113 aa9.56□□□□□ -0.88
SIX4-202ENST00000554079 CNTN2Q02246 1040 aa9.56□□□□□ -0.88
SIX4-202ENST00000554079 DBPQ10586 325 aaPredicted RBP9.56□□□□□ -0.88
SIX4-202ENST00000554079 RIN1Q13671 783 aa9.56□□□□□ -0.88
SIX4-202ENST00000554079 ATF7IP2Q5U623 682 aa9.56□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms