RNA–Protein interactions for RNA: ENST00000554074.1

SLIRP-203, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 3

Gene SLIRP, Length 445 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-203ENST00000554074 DPH1Q9BZG8 443 aa6.64□□□□□ -1.35
SLIRP-203ENST00000554074 TRIM7Q9C029 511 aa6.64□□□□□ -1.35
SLIRP-203ENST00000554074 RCOR3Q9P2K3 495 aaPredicted RBP6.64□□□□□ -1.35
SLIRP-203ENST00000554074 KLQ9UEF7 1012 aa6.64□□□□□ -1.35
SLIRP-203ENST00000554074 DOLKQ9UPQ8 538 aa6.64□□□□□ -1.35
SLIRP-203ENST00000554074 COQ6Q9Y2Z9 468 aa6.64□□□□□ -1.35
SLIRP-203ENST00000554074 SETXQ7Z333 2677 aaKnown RBP6.64□□□□□ -1.35
SLIRP-203ENST00000554074 GCN1Q92616 2671 aaKnown RBP6.64□□□□□ -1.35
SLIRP-203ENST00000554074 CCDC187A0A096LP49 1063 aa6.63□□□□□ -1.35
SLIRP-203ENST00000554074 EIF4E1BA6NMX2 242 aaKnown RBP6.63□□□□□ -1.35
SLIRP-203ENST00000554074 CDRT15L2A8MXV6 281 aa6.63□□□□□ -1.35
SLIRP-203ENST00000554074 PSMD11O00231 422 aa6.63□□□□□ -1.35
SLIRP-203ENST00000554074 DFFAO00273 331 aa6.63□□□□□ -1.35
SLIRP-203ENST00000554074 CACNB4O00305 520 aaPredicted RBP6.63□□□□□ -1.35
SLIRP-203ENST00000554074 PDE2AO00408 941 aaPredicted RBP6.63□□□□□ -1.35
SLIRP-203ENST00000554074 RECQL5O94762 991 aaPredicted RBP6.63□□□□□ -1.35
SLIRP-203ENST00000554074 PEX11BO96011 259 aa6.63□□□□□ -1.35
SLIRP-203ENST00000554074 CELA2BP08218 269 aaPredicted RBP6.63□□□□□ -1.35
SLIRP-203ENST00000554074 ITGA2BP08514 1039 aa6.63□□□□□ -1.35
SLIRP-203ENST00000554074 RARAP10276 462 aa6.63□□□□□ -1.35
SLIRP-203ENST00000554074 GM2AP17900 193 aa6.63□□□□□ -1.35
SLIRP-203ENST00000554074 IL1R2P27930 398 aa6.63□□□□□ -1.35
SLIRP-203ENST00000554074 RBMS1P29558 406 aaKnown RBP6.63□□□□□ -1.35
SLIRP-203ENST00000554074 CCKBRP32239 447 aa6.63□□□□□ -1.35
SLIRP-203ENST00000554074 PBX1P40424 430 aa6.63□□□□□ -1.35
SLIRP-203ENST00000554074 SCNN1BP51168 640 aa6.63□□□□□ -1.35
SLIRP-203ENST00000554074 PDX1P52945 283 aa6.63□□□□□ -1.35
SLIRP-203ENST00000554074 CDH6P55285 790 aa6.63□□□□□ -1.35
SLIRP-203ENST00000554074 TMPRSS3P57727 454 aa6.63□□□□□ -1.35
SLIRP-203ENST00000554074 FANCCQ00597 558 aa6.63□□□□□ -1.35
SLIRP-203ENST00000554074 SLC10A7Q0GE19 358 aa6.63□□□□□ -1.35
SLIRP-203ENST00000554074 CCDC173Q0VFZ6 552 aa6.63□□□□□ -1.35
SLIRP-203ENST00000554074 TRIM14Q14142 442 aa6.63□□□□□ -1.35
SLIRP-203ENST00000554074 SPIDRQ14159 915 aa6.63□□□□□ -1.35
SLIRP-203ENST00000554074 ZNF235Q14590 738 aa6.63□□□□□ -1.35
SLIRP-203ENST00000554074 TSR1Q2NL82 804 aaKnown RBP6.63□□□□□ -1.35
SLIRP-203ENST00000554074 SDK2Q58EX2 2172 aa6.63□□□□□ -1.35
SLIRP-203ENST00000554074 C3orf38Q5JPI3 329 aa6.63□□□□□ -1.35
SLIRP-203ENST00000554074 BROXQ5VW32 411 aa6.63□□□□□ -1.35
SLIRP-203ENST00000554074 HGSNATQ68CP4 663 aa6.63□□□□□ -1.35
SLIRP-203ENST00000554074 PNCKQ6P2M8 343 aa6.63□□□□□ -1.35
SLIRP-203ENST00000554074 OGFOD3Q6PK18 319 aa6.63□□□□□ -1.35
SLIRP-203ENST00000554074 ENPP7Q6UWV6 458 aa6.63□□□□□ -1.35
SLIRP-203ENST00000554074 ARHGAP36Q6ZRI8 547 aa6.63□□□□□ -1.35
SLIRP-203ENST00000554074 RAVER1Q8IY67 606 aaKnown RBP6.63□□□□□ -1.35
SLIRP-203ENST00000554074 CBARPQ8N350 705 aaPredicted RBP6.63□□□□□ -1.35
SLIRP-203ENST00000554074 BBS5Q8N3I7 341 aa6.63□□□□□ -1.35
SLIRP-203ENST00000554074 ARL14Q8N4G2 192 aa6.63□□□□□ -1.35
SLIRP-203ENST00000554074 GPR156Q8NFN8 814 aa6.63□□□□□ -1.35
SLIRP-203ENST00000554074 OR56A4Q8NGH8 313 aa6.63□□□□□ -1.35
SLIRP-203ENST00000554074 FAM71BQ8TC56 605 aa6.63□□□□□ -1.35
SLIRP-203ENST00000554074 KCNE4Q8WWG9 221 aa6.63□□□□□ -1.35
SLIRP-203ENST00000554074 FATE1Q969F0 183 aa6.63□□□□□ -1.35
SLIRP-203ENST00000554074 TSACCQ96A04 125 aaPredicted RBP6.63□□□□□ -1.35
SLIRP-203ENST00000554074 FUBP1Q96AE4 644 aaKnown RBP6.63□□□□□ -1.35
SLIRP-203ENST00000554074 WBP1Q96G27 269 aa6.63□□□□□ -1.35
SLIRP-203ENST00000554074 ATXN7L3BQ96GX2 97 aa6.63□□□□□ -1.35
SLIRP-203ENST00000554074 PRR11Q96HE9 360 aaPredicted RBP6.63□□□□□ -1.35
SLIRP-203ENST00000554074 COQ10AQ96MF6 247 aa6.63□□□□□ -1.35
SLIRP-203ENST00000554074 CSPG4P5Q96PW8 444 aa6.63□□□□□ -1.35
SLIRP-203ENST00000554074 NUDCD1Q96RS6 583 aa6.63□□□□□ -1.35
SLIRP-203ENST00000554074 STAU2Q9NUL3 570 aaKnown RBP eCLIP6.63□□□□□ -1.35
SLIRP-203ENST00000554074 MYO1AQ9UBC5 1043 aa6.63□□□□□ -1.35
SLIRP-203ENST00000554074 IP6K2Q9UHH9 426 aa6.63□□□□□ -1.35
SLIRP-203ENST00000554074 APPL1Q9UKG1 709 aa6.63□□□□□ -1.35
SLIRP-203ENST00000554074 ACSL6Q9UKU0 697 aa6.63□□□□□ -1.35
SLIRP-203ENST00000554074 PHTF1Q9UMS5 762 aa6.63□□□□□ -1.35
SLIRP-203ENST00000554074 GPR34Q9UPC5 381 aa6.63□□□□□ -1.35
SLIRP-203ENST00000554074 SATB2Q9UPW6 733 aa6.63□□□□□ -1.35
SLIRP-203ENST00000554074 PPIL1Q9Y3C6 166 aa6.63□□□□□ -1.35
SLIRP-203ENST00000554074 OR1A2Q9Y585 309 aa6.63□□□□□ -1.35
SLIRP-203ENST00000554074 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP6.63□□□□□ -1.356e-18■□□□□ 8
SLIRP-203ENST00000554074 RAI2Q9Y5P3 530 aa6.63□□□□□ -1.35
SLIRP-203ENST00000554074 ZNF106Q9H2Y7 1883 aaKnown RBP6.62□□□□□ -1.35
SLIRP-203ENST00000554074 CFAP46Q8IYW2 2715 aa6.62□□□□□ -1.35
SLIRP-203ENST00000554074 A0A1W2PNU3 283 aaPredicted RBP6.62□□□□□ -1.35
SLIRP-203ENST00000554074 TMEM202A6NGA9 273 aa6.62□□□□□ -1.35
SLIRP-203ENST00000554074 D6RAR5 112 aa6.62□□□□□ -1.35
SLIRP-203ENST00000554074 ERVH48-1M5A8F1 160 aa6.62□□□□□ -1.35
SLIRP-203ENST00000554074 NUDT21O43809 227 aaKnown RBP6.62□□□□□ -1.35
SLIRP-203ENST00000554074 MAFKO60675 156 aa6.62□□□□□ -1.35
SLIRP-203ENST00000554074 HEXIM1O94992 359 aaKnown RBP6.62□□□□□ -1.35
SLIRP-203ENST00000554074 PRKCGP05129 697 aa6.62□□□□□ -1.35
SLIRP-203ENST00000554074 SERPING1P05155 500 aa6.62□□□□□ -1.35
SLIRP-203ENST00000554074 PCCBP05166 539 aa6.62□□□□□ -1.35
SLIRP-203ENST00000554074 CYP1A2P05177 515 aa6.62□□□□□ -1.35
SLIRP-203ENST00000554074 CYP2A6P11509 494 aaPredicted RBP6.62□□□□□ -1.35
SLIRP-203ENST00000554074 MYCLP1P12525 358 aaPredicted RBP6.62□□□□□ -1.35
SLIRP-203ENST00000554074 SKILP12757 684 aa6.62□□□□□ -1.35
SLIRP-203ENST00000554074 KRT10P13645 584 aa6.62□□□□□ -1.35
SLIRP-203ENST00000554074 GLB1P16278 677 aa6.62□□□□□ -1.35
SLIRP-203ENST00000554074 AMPD1P23109 780 aa6.62□□□□□ -1.35
SLIRP-203ENST00000554074 CES1P23141 567 aa6.62□□□□□ -1.35
SLIRP-203ENST00000554074 VIPR1P32241 457 aa6.62□□□□□ -1.35
SLIRP-203ENST00000554074 MMP13P45452 471 aa6.62□□□□□ -1.35
SLIRP-203ENST00000554074 ZBED6P86452 979 aa6.62□□□□□ -1.35
SLIRP-203ENST00000554074 RHDQ02161 417 aa6.62□□□□□ -1.35
SLIRP-203ENST00000554074 SLC25A11Q02978 314 aaKnown RBP6.62□□□□□ -1.35
SLIRP-203ENST00000554074 DPTQ07507 201 aa6.62□□□□□ -1.35
SLIRP-203ENST00000554074 PEX6Q13608 980 aa6.62□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms