RNA–Protein interactions for RNA: ENST00000553989.1

TDP1-208, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 2

Gene TDP1, Length 728 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-208ENST00000553989 GFM1Q96RP9 751 aaKnown RBP8.92□□□□□ -0.98
TDP1-208ENST00000553989 ARHGAP9Q9BRR9 750 aa8.92□□□□□ -0.98
TDP1-208ENST00000553989 SELENOOQ9BVL4 669 aa8.92□□□□□ -0.98
TDP1-208ENST00000553989 STK33Q9BYT3 514 aa8.92□□□□□ -0.98
TDP1-208ENST00000553989 RAB6CQ9H0N0 254 aa8.92□□□□□ -0.98
TDP1-208ENST00000553989 MED4Q9NPJ6 270 aa8.92□□□□□ -0.98
TDP1-208ENST00000553989 MBNL1Q9NR56 388 aaKnown RBP8.92□□□□□ -0.98
TDP1-208ENST00000553989 SEPT11Q9NVA2 429 aaKnown RBP8.92□□□□□ -0.98
TDP1-208ENST00000553989 CWC15Q9P013 229 aaKnown RBP8.92□□□□□ -0.98
TDP1-208ENST00000553989 ZKSCAN7Q9P0L1 754 aaPredicted RBP8.92□□□□□ -0.98
TDP1-208ENST00000553989 RNF14Q9UBS8 474 aa8.92□□□□□ -0.98
TDP1-208ENST00000553989 KLQ9UEF7 1012 aa8.92□□□□□ -0.98
TDP1-208ENST00000553989 COQ6Q9Y2Z9 468 aa8.92□□□□□ -0.98
TDP1-208ENST00000553989 HEMK1Q9Y5R4 338 aaPredicted RBP8.92□□□□□ -0.98
TDP1-208ENST00000553989 A0A1W2PNU3 283 aaPredicted RBP8.91□□□□□ -0.98
TDP1-208ENST00000553989 CDRT15L2A8MXV6 281 aa8.91□□□□□ -0.98
TDP1-208ENST00000553989 B8ZZF3 427 aa8.91□□□□□ -0.98
TDP1-208ENST00000553989 FAM72CH0Y354 149 aa8.91□□□□□ -0.98
TDP1-208ENST00000553989 K7ENP7 123 aa8.91□□□□□ -0.98
TDP1-208ENST00000553989 TOR1BO14657 336 aa8.91□□□□□ -0.98
TDP1-208ENST00000553989 PLD2O14939 933 aa8.91□□□□□ -0.98
TDP1-208ENST00000553989 AREL1O15033 823 aa8.91□□□□□ -0.98
TDP1-208ENST00000553989 CASC3O15234 703 aaKnown RBP8.91□□□□□ -0.98
TDP1-208ENST00000553989 KDELR3O43731 214 aa8.91□□□□□ -0.98
TDP1-208ENST00000553989 CREB3O43889 395 aa8.91□□□□□ -0.98
TDP1-208ENST00000553989 RASGRP1O95267 797 aa8.91□□□□□ -0.98
TDP1-208ENST00000553989 PIGNO95427 931 aa8.91□□□□□ -0.98
TDP1-208ENST00000553989 GJB6O95452 261 aa8.91□□□□□ -0.98
TDP1-208ENST00000553989 PCCBP05166 539 aa8.91□□□□□ -0.98
TDP1-208ENST00000553989 RPLP0P05388 317 aaKnown RBP8.91□□□□□ -0.98
TDP1-208ENST00000553989 JMJD7P0C870 316 aa8.91□□□□□ -0.98
TDP1-208ENST00000553989 KRT3P12035 628 aa8.91□□□□□ -0.98
TDP1-208ENST00000553989 KRT10P13645 584 aa8.91□□□□□ -0.98
TDP1-208ENST00000553989 DESP17661 470 aa8.91□□□□□ -0.98
TDP1-208ENST00000553989 ITIH2P19823 946 aa8.91□□□□□ -0.98
TDP1-208ENST00000553989 EPHB2P29323 1055 aa8.91□□□□□ -0.98
TDP1-208ENST00000553989 NSFP46459 744 aaKnown RBP8.91□□□□□ -0.98
TDP1-208ENST00000553989 HK3P52790 923 aa8.91□□□□□ -0.98
TDP1-208ENST00000553989 PDX1P52945 283 aa8.91□□□□□ -0.98
TDP1-208ENST00000553989 NRG1Q02297 640 aaPredicted RBP8.91□□□□□ -0.98
TDP1-208ENST00000553989 CLN3Q13286 438 aa8.91□□□□□ -0.98
TDP1-208ENST00000553989 EIF3IQ13347 325 aaKnown RBP8.91□□□□□ -0.98
TDP1-208ENST00000553989 LRRC14Q15048 493 aa8.91□□□□□ -0.98
TDP1-208ENST00000553989 TUBB8Q3ZCM7 444 aa8.91□□□□□ -0.98
TDP1-208ENST00000553989 EFHC2Q5JST6 749 aa8.91□□□□□ -0.98
TDP1-208ENST00000553989 FAM72AQ5TYM5 149 aa8.91□□□□□ -0.98
TDP1-208ENST00000553989 MANEALQ5VSG8 457 aa8.91□□□□□ -0.98
TDP1-208ENST00000553989 FAM72DQ6L9T8 149 aa8.91□□□□□ -0.98
TDP1-208ENST00000553989 ERAP2Q6P179 960 aa8.91□□□□□ -0.98
TDP1-208ENST00000553989 SCYL2Q6P3W7 929 aa8.91□□□□□ -0.98
TDP1-208ENST00000553989 INO80CQ6PI98 192 aaPredicted RBP8.91□□□□□ -0.98
TDP1-208ENST00000553989 RAB11FIP2Q7L804 512 aa8.91□□□□□ -0.98
TDP1-208ENST00000553989 ARCQ7LC44 396 aa8.91□□□□□ -0.98
TDP1-208ENST00000553989 STRADAQ7RTN6 431 aa8.91□□□□□ -0.98
TDP1-208ENST00000553989 SLFN11Q7Z7L1 901 aa8.91□□□□□ -0.98
TDP1-208ENST00000553989 FAM72BQ86X60 149 aa8.91□□□□□ -0.98
TDP1-208ENST00000553989 ZNF677Q86XU0 584 aa8.91□□□□□ -0.98
TDP1-208ENST00000553989 SDR16C5Q8N3Y7 309 aa8.91□□□□□ -0.98
TDP1-208ENST00000553989 TP53I13Q8NBR0 393 aaPredicted RBP8.91□□□□□ -0.98
TDP1-208ENST00000553989 TRIM58Q8NG06 486 aa8.91□□□□□ -0.98
TDP1-208ENST00000553989 ATL2Q8NHH9 583 aa8.91□□□□□ -0.98
TDP1-208ENST00000553989 JOSD2Q8TAC2 188 aa8.91□□□□□ -0.98
TDP1-208ENST00000553989 SLC30A5Q8TAD4 765 aa8.91□□□□□ -0.98
TDP1-208ENST00000553989 CASKIN2Q8WXE0 1202 aa8.91□□□□□ -0.98
TDP1-208ENST00000553989 TTC9Q92623 222 aa8.91□□□□□ -0.98
TDP1-208ENST00000553989 TSACCQ96A04 125 aaPredicted RBP8.91□□□□□ -0.98
TDP1-208ENST00000553989 MED8Q96G25 268 aa8.91□□□□□ -0.98
TDP1-208ENST00000553989 TBATAQ96M53 351 aa8.91□□□□□ -0.98
TDP1-208ENST00000553989 CCNL2Q96S94 520 aaPredicted RBP8.91□□□□□ -0.98
TDP1-208ENST00000553989 CHP1Q99653 195 aa8.91□□□□□ -0.98
TDP1-208ENST00000553989 CPEB1Q9BZB8 566 aaKnown RBP8.91□□□□□ -0.98
TDP1-208ENST00000553989 FOXP3Q9BZS1 431 aa8.91□□□□□ -0.98
TDP1-208ENST00000553989 TTYH3Q9C0H2 523 aa8.91□□□□□ -0.98
TDP1-208ENST00000553989 CLPBQ9H078 707 aa8.91□□□□□ -0.98
TDP1-208ENST00000553989 RETREG1Q9H6L5 497 aa8.91□□□□□ -0.98
TDP1-208ENST00000553989 NHEJ1Q9H9Q4 299 aaPredicted RBP8.91□□□□□ -0.98
TDP1-208ENST00000553989 PISDQ9UG56 409 aa8.91□□□□□ -0.98
TDP1-208ENST00000553989 RABGEF1Q9UJ41 708 aa8.91□□□□□ -0.98
TDP1-208ENST00000553989 PNMA8BQ9ULN7 279 aaPredicted RBP8.91□□□□□ -0.98
TDP1-208ENST00000553989 GUCA1BQ9UMX6 200 aa8.91□□□□□ -0.98
TDP1-208ENST00000553989 GPR34Q9UPC5 381 aa8.91□□□□□ -0.98
TDP1-208ENST00000553989 JRKLQ9Y4A0 524 aa8.91□□□□□ -0.98
TDP1-208ENST00000553989 DOCK4Q8N1I0 1966 aa8.91□□□□□ -0.98
TDP1-208ENST00000553989 HELZ2Q9BYK8 2649 aaKnown RBP8.91□□□□□ -0.98
TDP1-208ENST00000553989 ANKRD62A6NC57 917 aa8.9□□□□□ -0.98
TDP1-208ENST00000553989 C2CD4BA6NLJ0 364 aa8.9□□□□□ -0.98
TDP1-208ENST00000553989 TMEM110-MUSTN1A8MSY1 372 aa8.9□□□□□ -0.98
TDP1-208ENST00000553989 D6RAR5 112 aa8.9□□□□□ -0.98
TDP1-208ENST00000553989 TMX2-CTNND1H3BSU7 103 aa8.9□□□□□ -0.98
TDP1-208ENST00000553989 LCA5LO95447 670 aa8.9□□□□□ -0.98
TDP1-208ENST00000553989 HGFP14210 728 aa8.9□□□□□ -0.98
TDP1-208ENST00000553989 GPD1P21695 349 aa8.9□□□□□ -0.98
TDP1-208ENST00000553989 MMP8P22894 467 aa8.9□□□□□ -0.98
TDP1-208ENST00000553989 SLC5A2P31639 672 aa8.9□□□□□ -0.98
TDP1-208ENST00000553989 PTPN9P43378 593 aa8.9□□□□□ -0.98
TDP1-208ENST00000553989 VAV2P52735 878 aa8.9□□□□□ -0.98
TDP1-208ENST00000553989 INHBCP55103 352 aa8.9□□□□□ -0.98
TDP1-208ENST00000553989 HDAC4P56524 1084 aa8.9□□□□□ -0.98
TDP1-208ENST00000553989 SRP54P61011 504 aaKnown RBP8.9□□□□□ -0.98
TDP1-208ENST00000553989 POLR2FP61218 127 aaKnown RBP8.9□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms