RNA–Protein interactions for RNA: ENST00000553981.1

SLIRP-202, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 3

Gene SLIRP, Length 285 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-202ENST00000553981 VWA3AA6NCI4 1184 aa3.32□□□□□ -1.88
SLIRP-202ENST00000553981 TRABD2BA6NFA1 517 aa3.32□□□□□ -1.88
SLIRP-202ENST00000553981 DNAJC9-AS1A6NH13 148 aa3.32□□□□□ -1.88
SLIRP-202ENST00000553981 HHLA1C9JL84 531 aa3.32□□□□□ -1.88
SLIRP-202ENST00000553981 F8VP50 259 aa3.32□□□□□ -1.88
SLIRP-202ENST00000553981 PHF2O75151 1096 aa3.32□□□□□ -1.88
SLIRP-202ENST00000553981 KLKB1P03952 638 aa3.32□□□□□ -1.88
SLIRP-202ENST00000553981 SERPINF2P08697 491 aa3.32□□□□□ -1.88
SLIRP-202ENST00000553981 ZDHHC11BP0C7U3 371 aa3.32□□□□□ -1.88
SLIRP-202ENST00000553981 PLA2G2AP14555 144 aa3.32□□□□□ -1.88
SLIRP-202ENST00000553981 ALOX15P16050 662 aaPredicted RBP3.32□□□□□ -1.88
SLIRP-202ENST00000553981 XBP1P17861 261 aa3.32□□□□□ -1.88
SLIRP-202ENST00000553981 CASP1P29466 404 aa3.32□□□□□ -1.88
SLIRP-202ENST00000553981 EIF2S3P41091 472 aaKnown RBP3.32□□□□□ -1.88
SLIRP-202ENST00000553981 PRPHP41219 470 aa3.32□□□□□ -1.88
SLIRP-202ENST00000553981 CASP4P49662 377 aa3.32□□□□□ -1.88
SLIRP-202ENST00000553981 CDH8P55286 799 aa3.32□□□□□ -1.88
SLIRP-202ENST00000553981 CXADRP78310 365 aa3.32□□□□□ -1.88
SLIRP-202ENST00000553981 PDCD1Q15116 288 aa3.32□□□□□ -1.88
SLIRP-202ENST00000553981 GEN1Q17RS7 908 aa3.32□□□□□ -1.88
SLIRP-202ENST00000553981 DUOXA1Q1HG43 343 aa3.32□□□□□ -1.88
SLIRP-202ENST00000553981 CFAP221Q4G0U5 840 aa3.32□□□□□ -1.88
SLIRP-202ENST00000553981 MDH1BQ5I0G3 518 aa3.32□□□□□ -1.88
SLIRP-202ENST00000553981 LYSMD4Q5XG99 296 aa3.32□□□□□ -1.88
SLIRP-202ENST00000553981 HAUS3Q68CZ6 603 aa3.32□□□□□ -1.88
SLIRP-202ENST00000553981 ADALQ6DHV7 355 aa3.32□□□□□ -1.88
SLIRP-202ENST00000553981 FAM173BQ6P4H8 233 aa3.32□□□□□ -1.88
SLIRP-202ENST00000553981 LPCAT2Q7L5N7 544 aa3.32□□□□□ -1.88
SLIRP-202ENST00000553981 GLRX5Q86SX6 157 aa3.32□□□□□ -1.88
SLIRP-202ENST00000553981 C11orf74Q86VG3 221 aa3.32□□□□□ -1.88
SLIRP-202ENST00000553981 GPBP1Q86WP2 473 aa3.32□□□□□ -1.88
SLIRP-202ENST00000553981 CBWD2Q8IUF1 395 aa3.32□□□□□ -1.88
SLIRP-202ENST00000553981 NAXDQ8IW45 347 aa3.32□□□□□ -1.88
SLIRP-202ENST00000553981 BRSK2Q8IWQ3 736 aa3.32□□□□□ -1.88
SLIRP-202ENST00000553981 SCN4BQ8IWT1 228 aa3.32□□□□□ -1.88
SLIRP-202ENST00000553981 PPM1KQ8N3J5 372 aa3.32□□□□□ -1.88
SLIRP-202ENST00000553981 ZNF843Q8N446 348 aa3.32□□□□□ -1.88
SLIRP-202ENST00000553981 CPA6Q8N4T0 437 aa3.32□□□□□ -1.88
SLIRP-202ENST00000553981 MYCT1Q8N699 235 aa3.32□□□□□ -1.88
SLIRP-202ENST00000553981 CSGALNACT2Q8N6G5 542 aa3.32□□□□□ -1.88
SLIRP-202ENST00000553981 TERB1Q8NA31 727 aa3.32□□□□□ -1.88
SLIRP-202ENST00000553981 OR2W6PQ8NHA6 318 aa3.32□□□□□ -1.88
SLIRP-202ENST00000553981 ERMNQ8TAM6 284 aa3.32□□□□□ -1.88
SLIRP-202ENST00000553981 IPO4Q8TEX9 1081 aaKnown RBP3.32□□□□□ -1.88
SLIRP-202ENST00000553981 C2orf15Q8WU43 125 aaKnown RBP3.32□□□□□ -1.88
SLIRP-202ENST00000553981 SORCS1Q8WY21 1168 aa3.32□□□□□ -1.88
SLIRP-202ENST00000553981 DNASE2BQ8WZ79 361 aa3.32□□□□□ -1.88
SLIRP-202ENST00000553981 WASF1Q92558 559 aa3.32□□□□□ -1.88
SLIRP-202ENST00000553981 MRPS31Q92665 395 aaKnown RBP3.32□□□□□ -1.88
SLIRP-202ENST00000553981 RAD54LQ92698 747 aa3.32□□□□□ -1.88
SLIRP-202ENST00000553981 ATP2A3Q93084 1043 aa3.32□□□□□ -1.88
SLIRP-202ENST00000553981 NACC2Q96BF6 587 aa3.32□□□□□ -1.88
SLIRP-202ENST00000553981 BICD1Q96G01 975 aa3.32□□□□□ -1.88
SLIRP-202ENST00000553981 FUBP3Q96I24 572 aaKnown RBP eCLIP3.32□□□□□ -1.88
SLIRP-202ENST00000553981 EPSTI1Q96J88 318 aa3.32□□□□□ -1.88
SLIRP-202ENST00000553981 PDLIM2Q96JY6 352 aa3.32□□□□□ -1.88
SLIRP-202ENST00000553981 MRGPRX1Q96LB2 322 aa3.32□□□□□ -1.88
SLIRP-202ENST00000553981 DRC1Q96MC2 740 aa3.32□□□□□ -1.88
SLIRP-202ENST00000553981 TWNKQ96RR1 684 aa3.32□□□□□ -1.88
SLIRP-202ENST00000553981 PNKPQ96T60 521 aa3.32□□□□□ -1.88
SLIRP-202ENST00000553981 SMOQ99835 787 aa3.32□□□□□ -1.88
SLIRP-202ENST00000553981 GABRG3Q99928 467 aa3.32□□□□□ -1.88
SLIRP-202ENST00000553981 SYT15Q9BQS2 421 aa3.32□□□□□ -1.88
SLIRP-202ENST00000553981 FAM213AQ9BRX8 229 aa3.32□□□□□ -1.88
SLIRP-202ENST00000553981 NUSAP1Q9BXS6 441 aaKnown RBP3.32□□□□□ -1.88
SLIRP-202ENST00000553981 KLK15Q9H2R5 256 aa3.32□□□□□ -1.88
SLIRP-202ENST00000553981 ST6GALNAC4Q9H4F1 302 aa3.32□□□□□ -1.88
SLIRP-202ENST00000553981 PRORYQ9H606 182 aa3.32□□□□□ -1.88
SLIRP-202ENST00000553981 ASB7Q9H672 318 aa3.32□□□□□ -1.88
SLIRP-202ENST00000553981 TMEM206Q9H813 350 aa3.32□□□□□ -1.88
SLIRP-202ENST00000553981 KIF9Q9HAQ2 790 aa3.32□□□□□ -1.88
SLIRP-202ENST00000553981 C17orf75Q9HAS0 396 aa3.32□□□□□ -1.88
SLIRP-202ENST00000553981 NMUR1Q9HB89 426 aa3.32□□□□□ -1.88
SLIRP-202ENST00000553981 CASS4Q9NQ75 786 aa3.32□□□□□ -1.88
SLIRP-202ENST00000553981 TBCCD1Q9NVR7 557 aa3.32□□□□□ -1.88
SLIRP-202ENST00000553981 GDAP2Q9NXN4 497 aa3.32□□□□□ -1.88
SLIRP-202ENST00000553981 WSB2Q9NYS7 404 aaPredicted RBP3.32□□□□□ -1.88
SLIRP-202ENST00000553981 PLK2Q9NYY3 685 aa3.32□□□□□ -1.88
SLIRP-202ENST00000553981 IL37Q9NZH6 218 aa3.32□□□□□ -1.88
SLIRP-202ENST00000553981 CFAP97Q9P2B7 532 aa3.32□□□□□ -1.88
SLIRP-202ENST00000553981 LRIT1Q9P2V4 623 aa3.32□□□□□ -1.88
SLIRP-202ENST00000553981 RNF7Q9UBF6 113 aa3.32□□□□□ -1.88
SLIRP-202ENST00000553981 HMGXB4Q9UGU5 601 aa3.32□□□□□ -1.88
SLIRP-202ENST00000553981 AGO2Q9UKV8 859 aaKnown RBP3.32□□□□□ -1.88
SLIRP-202ENST00000553981 EDARQ9UNE0 448 aa3.32□□□□□ -1.88
SLIRP-202ENST00000553981 DERAQ9Y315 318 aa3.32□□□□□ -1.88
SLIRP-202ENST00000553981 C2CD2Q9Y426 696 aa3.32□□□□□ -1.88
SLIRP-202ENST00000553981 SNX9Q9Y5X1 595 aa3.32□□□□□ -1.88
SLIRP-202ENST00000553981 CLIC4Q9Y696 253 aa3.32□□□□□ -1.88
SLIRP-202ENST00000553981 URB1O60287 2271 aaKnown RBP3.32□□□□□ -1.88
SLIRP-202ENST00000553981 LAMA1P25391 3075 aa3.32□□□□□ -1.88
SLIRP-202ENST00000553981 FASNP49327 2511 aaKnown RBP3.31□□□□□ -1.88
SLIRP-202ENST00000553981 IGF2RP11717 2491 aa3.31□□□□□ -1.88
SLIRP-202ENST00000553981 FAM208BQ5VWN6 2430 aa3.31□□□□□ -1.88
SLIRP-202ENST00000553981 A0A087WV48 116 aa3.31□□□□□ -1.88
SLIRP-202ENST00000553981 A0A1B0GVT2 93 aa3.31□□□□□ -1.88
SLIRP-202ENST00000553981 A0A1W2PNU3 283 aaPredicted RBP3.31□□□□□ -1.88
SLIRP-202ENST00000553981 FAM92AA1XBS5 289 aa3.31□□□□□ -1.88
SLIRP-202ENST00000553981 FRMD3A2A2Y4 597 aa3.31□□□□□ -1.88
SLIRP-202ENST00000553981 CGB1A6NKQ9 187 aa3.31□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms