RNA–Protein interactions for RNA: ENST00000553840.5

FOXN3-204, Transcript of forkhead box N3, humanhuman

TSL 4

Gene FOXN3, Length 555 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-204ENST00000553840 MFSD11O43934 449 aa17.76■□□□□ 0.43
FOXN3-204ENST00000553840 HOXC4P09017 264 aaPredicted RBP17.76■□□□□ 0.43
FOXN3-204ENST00000553840 MX2P20592 715 aa17.76■□□□□ 0.43
FOXN3-204ENST00000553840 CCNCP24863 283 aa17.76■□□□□ 0.43
FOXN3-204ENST00000553840 KIAA1024LP59773 190 aa17.76■□□□□ 0.43
FOXN3-204ENST00000553840 GALNT2Q10471 571 aa17.76■□□□□ 0.43
FOXN3-204ENST00000553840 ARHGEF7Q14155 803 aa17.76■□□□□ 0.43
FOXN3-204ENST00000553840 ASTE1Q2TB18 679 aaPredicted RBP17.76■□□□□ 0.43
FOXN3-204ENST00000553840 ATP13A4Q4VNC1 1196 aa17.76■□□□□ 0.43
FOXN3-204ENST00000553840 CDCP2Q5VXM1 449 aa17.76■□□□□ 0.43
FOXN3-204ENST00000553840 NCBP2-AS2Q69YL0 99 aa17.76■□□□□ 0.43
FOXN3-204ENST00000553840 USP45Q70EL2 814 aa17.76■□□□□ 0.43
FOXN3-204ENST00000553840 CNGA4Q8IV77 575 aa17.76■□□□□ 0.43
FOXN3-204ENST00000553840 TEX26Q8N6G2 289 aa17.76■□□□□ 0.43
FOXN3-204ENST00000553840 PLA2G15Q8NCC3 412 aa17.76■□□□□ 0.43
FOXN3-204ENST00000553840 RNF214Q8ND24 703 aa17.76■□□□□ 0.43
FOXN3-204ENST00000553840 PCDH19Q8TAB3 1148 aa17.76■□□□□ 0.43
FOXN3-204ENST00000553840 WDR48Q8TAF3 677 aa17.76■□□□□ 0.43
FOXN3-204ENST00000553840 NUS1Q96E22 293 aa17.76■□□□□ 0.43
FOXN3-204ENST00000553840 ZNF830Q96NB3 372 aaPredicted RBP17.76■□□□□ 0.43
FOXN3-204ENST00000553840 CLPBQ9H078 707 aa17.76■□□□□ 0.43
FOXN3-204ENST00000553840 AMACRQ9UHK6 382 aa17.76■□□□□ 0.43
FOXN3-204ENST00000553840 PNMA8BQ9ULN7 279 aaPredicted RBP17.76■□□□□ 0.43
FOXN3-204ENST00000553840 DMXL2Q8TDJ6 3036 aa17.76■□□□□ 0.43
FOXN3-204ENST00000553840 ACACAQ13085 2346 aa17.76■□□□□ 0.43
FOXN3-204ENST00000553840 MATN3O15232 486 aa17.75■□□□□ 0.43
FOXN3-204ENST00000553840 MFAP3LO75121 409 aa17.75■□□□□ 0.43
FOXN3-204ENST00000553840 PGLSO95336 258 aa17.75■□□□□ 0.43
FOXN3-204ENST00000553840 CA4P22748 312 aa17.75■□□□□ 0.43
FOXN3-204ENST00000553840 ACTN2P35609 894 aa17.75■□□□□ 0.43
FOXN3-204ENST00000553840 ARHGAP25P42331 645 aa17.75■□□□□ 0.43
FOXN3-204ENST00000553840 TAS2R40P59535 323 aa17.75■□□□□ 0.43
FOXN3-204ENST00000553840 TRAF2Q12933 501 aa17.75■□□□□ 0.43
FOXN3-204ENST00000553840 MESDQ14696 234 aa17.75■□□□□ 0.43
FOXN3-204ENST00000553840 ODF2Q5BJF6 829 aa17.75■□□□□ 0.43
FOXN3-204ENST00000553840 DENND2CQ68D51 928 aa17.75■□□□□ 0.43
FOXN3-204ENST00000553840 PNCKQ6P2M8 343 aa17.75■□□□□ 0.43
FOXN3-204ENST00000553840 GUSBP11Q6P575 273 aa17.75■□□□□ 0.43
FOXN3-204ENST00000553840 C19orf48Q6RUI8 117 aa17.75■□□□□ 0.43
FOXN3-204ENST00000553840 LRRC69Q6ZNQ3 347 aa17.75■□□□□ 0.43
FOXN3-204ENST00000553840 RHOT2Q8IXI1 618 aa17.75■□□□□ 0.43
FOXN3-204ENST00000553840 LSMEM2Q8N112 164 aa17.75■□□□□ 0.43
FOXN3-204ENST00000553840 OR56A4Q8NGH8 313 aa17.75■□□□□ 0.43
FOXN3-204ENST00000553840 SLC35G2Q8TBE7 412 aa17.75■□□□□ 0.43
FOXN3-204ENST00000553840 HNRNPLLQ8WVV9 542 aaKnown RBP17.75■□□□□ 0.43
FOXN3-204ENST00000553840 FUBP1Q96AE4 644 aaKnown RBP17.75■□□□□ 0.43
FOXN3-204ENST00000553840 GRAMD1AQ96CP6 724 aa17.75■□□□□ 0.43
FOXN3-204ENST00000553840 SCRN2Q96FV2 425 aa17.75■□□□□ 0.43
FOXN3-204ENST00000553840 NSMCE3Q96MG7 304 aa17.75■□□□□ 0.43
FOXN3-204ENST00000553840 DCBLD2Q96PD2 775 aa17.75■□□□□ 0.43
FOXN3-204ENST00000553840 SEMA3CQ99985 751 aa17.75■□□□□ 0.43
FOXN3-204ENST00000553840 WDR26Q9H7D7 661 aa17.75■□□□□ 0.43
FOXN3-204ENST00000553840 NHEJ1Q9H9Q4 299 aaPredicted RBP17.75■□□□□ 0.43
FOXN3-204ENST00000553840 GULP1Q9UBP9 304 aa17.75■□□□□ 0.43
FOXN3-204ENST00000553840 PADI4Q9UM07 663 aa17.75■□□□□ 0.43
FOXN3-204ENST00000553840 DGKBQ9Y6T7 804 aa17.75■□□□□ 0.43
FOXN3-204ENST00000553840 URB1O60287 2271 aaKnown RBP17.74■□□□□ 0.43
FOXN3-204ENST00000553840 PSMD11O00231 422 aa17.74■□□□□ 0.43
FOXN3-204ENST00000553840 TNFRSF10CO14798 259 aa17.74■□□□□ 0.43
FOXN3-204ENST00000553840 RRP8O43159 456 aaKnown RBP17.74■□□□□ 0.43
FOXN3-204ENST00000553840 CSO75390 466 aaKnown RBP17.74■□□□□ 0.43
FOXN3-204ENST00000553840 HEXIM1O94992 359 aaKnown RBP17.74■□□□□ 0.43
FOXN3-204ENST00000553840 TRIM23P36406 574 aa17.74■□□□□ 0.43
FOXN3-204ENST00000553840 CNGA3Q16281 694 aa17.74■□□□□ 0.43
FOXN3-204ENST00000553840 SLC35F3Q8IY50 421 aa17.74■□□□□ 0.43
FOXN3-204ENST00000553840 ARL10Q8N8L6 244 aa17.74■□□□□ 0.43
FOXN3-204ENST00000553840 OR6C4Q8NGE1 309 aa17.74■□□□□ 0.43
FOXN3-204ENST00000553840 FATE1Q969F0 183 aa17.74■□□□□ 0.43
FOXN3-204ENST00000553840 COQ10AQ96MF6 247 aa17.74■□□□□ 0.43
FOXN3-204ENST00000553840 TSGA13Q96PP4 275 aa17.74■□□□□ 0.43
FOXN3-204ENST00000553840 RBM15Q96T37 977 aaKnown RBP eCLIP17.74■□□□□ 0.43
FOXN3-204ENST00000553840 PHPT1Q9NRX4 125 aaPredicted RBP17.74■□□□□ 0.43
FOXN3-204ENST00000553840 RBM22Q9NW64 420 aaKnown RBP eCLIP17.74■□□□□ 0.431e-6■■□□□ 11.4
FOXN3-204ENST00000553840 MOSPD1Q9UJG1 213 aa17.74■□□□□ 0.43
FOXN3-204ENST00000553840 TTLL3Q9Y4R7 772 aa17.74■□□□□ 0.43
FOXN3-204ENST00000553840 RAI2Q9Y5P3 530 aa17.74■□□□□ 0.43
FOXN3-204ENST00000553840 FREM2Q5SZK8 3169 aa17.73■□□□□ 0.43
FOXN3-204ENST00000553840 A0A087WV48 116 aa17.73■□□□□ 0.43
FOXN3-204ENST00000553840 USP12O75317 370 aa17.73■□□□□ 0.43
FOXN3-204ENST00000553840 TCEA3O75764 348 aa17.73■□□□□ 0.43
FOXN3-204ENST00000553840 MYCLP1P12525 358 aaPredicted RBP17.73■□□□□ 0.43
FOXN3-204ENST00000553840 TGM2P21980 687 aa17.73■□□□□ 0.43
FOXN3-204ENST00000553840 KDELR1P24390 212 aa17.73■□□□□ 0.43
FOXN3-204ENST00000553840 EPHB1P54762 984 aa17.73■□□□□ 0.43
FOXN3-204ENST00000553840 COL28A1Q2UY09 1125 aa17.73■□□□□ 0.43
FOXN3-204ENST00000553840 RBM44Q6ZP01 1051 aaKnown RBP17.73■□□□□ 0.43
FOXN3-204ENST00000553840 CCNYQ8ND76 341 aa17.73■□□□□ 0.43
FOXN3-204ENST00000553840 TRAF3IP1Q8TDR0 691 aaPredicted RBP17.73■□□□□ 0.43
FOXN3-204ENST00000553840 MAML1Q92585 1016 aa17.73■□□□□ 0.43
FOXN3-204ENST00000553840 FAF2Q96CS3 445 aa17.73■□□□□ 0.43
FOXN3-204ENST00000553840 CHP1Q99653 195 aa17.73■□□□□ 0.43
FOXN3-204ENST00000553840 MAK16Q9BXY0 300 aaKnown RBP17.73■□□□□ 0.43
FOXN3-204ENST00000553840 SPTLC3Q9NUV7 552 aa17.73■□□□□ 0.43
FOXN3-204ENST00000553840 GPR34Q9UPC5 381 aa17.73■□□□□ 0.43
FOXN3-204ENST00000553840 ANKRD11Q6UB99 2663 aaPredicted RBP17.73■□□□□ 0.43
FOXN3-204ENST00000553840 LRRD1A4D1F6 860 aa17.72■□□□□ 0.43
FOXN3-204ENST00000553840 GOLGA6CA6NDK9 693 aa17.72■□□□□ 0.43
FOXN3-204ENST00000553840 GOLGA6BA6NDN3 693 aa17.72■□□□□ 0.43
FOXN3-204ENST00000553840 TMEM202A6NGA9 273 aa17.72■□□□□ 0.43
FOXN3-204ENST00000553840 NPIPB15A6NHN6 443 aaPredicted RBP17.72■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms