RNA–Protein interactions for RNA: ENST00000553605.1

PRPF39-204, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 3

Gene PRPF39, Length 582 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-204ENST00000553605 FOXD4L5Q5VV16 416 aaPredicted RBP13.85□□□□□ -0.19
PRPF39-204ENST00000553605 SLC26A9Q7LBE3 791 aa13.85□□□□□ -0.19
PRPF39-204ENST00000553605 TMEM135Q86UB9 458 aa13.85□□□□□ -0.19
PRPF39-204ENST00000553605 APLFQ8IW19 511 aaPredicted RBP13.85□□□□□ -0.19
PRPF39-204ENST00000553605 FOXD4L4Q8WXT5 416 aaPredicted RBP13.85□□□□□ -0.19
PRPF39-204ENST00000553605 PGAP3Q96FM1 320 aaPredicted RBP13.85□□□□□ -0.19
PRPF39-204ENST00000553605 LGR4Q9BXB1 951 aa13.85□□□□□ -0.19
PRPF39-204ENST00000553605 SLC29A3Q9BZD2 475 aa13.85□□□□□ -0.19
PRPF39-204ENST00000553605 GTPBP4Q9BZE4 634 aaKnown RBP13.85□□□□□ -0.19
PRPF39-204ENST00000553605 PCDH12Q9NPG4 1184 aa13.85□□□□□ -0.19
PRPF39-204ENST00000553605 ACP6Q9NPH0 428 aa13.85□□□□□ -0.19
PRPF39-204ENST00000553605 MFHAS1Q9Y4C4 1052 aa13.85□□□□□ -0.19
PRPF39-204ENST00000553605 DOCK4Q8N1I0 1966 aa13.85□□□□□ -0.19
PRPF39-204ENST00000553605 PRRC2CQ9Y520 2896 aaKnown RBP13.85□□□□□ -0.19
PRPF39-204ENST00000553605 SETD2Q9BYW2 2564 aaPredicted RBP13.84□□□□□ -0.19
PRPF39-204ENST00000553605 CDC14CA4D256 554 aa13.84□□□□□ -0.19
PRPF39-204ENST00000553605 POLR1CO15160 346 aaPredicted RBP13.84□□□□□ -0.19
PRPF39-204ENST00000553605 DNAJB5O75953 348 aa13.84□□□□□ -0.19
PRPF39-204ENST00000553605 IGSF6O95976 241 aa13.84□□□□□ -0.19
PRPF39-204ENST00000553605 PRF1P14222 555 aa13.84□□□□□ -0.19
PRPF39-204ENST00000553605 AK4P27144 223 aaPredicted RBP13.84□□□□□ -0.19
PRPF39-204ENST00000553605 TRIM23P36406 574 aa13.84□□□□□ -0.19
PRPF39-204ENST00000553605 PPM1FP49593 454 aaPredicted RBP13.84□□□□□ -0.19
PRPF39-204ENST00000553605 RNASE9P60153 205 aaKnown RBP13.84□□□□□ -0.19
PRPF39-204ENST00000553605 GPLD1P80108 840 aa13.84□□□□□ -0.19
PRPF39-204ENST00000553605 RAPGEF1Q13905 1077 aa13.84□□□□□ -0.19
PRPF39-204ENST00000553605 UGP2Q16851 508 aa13.84□□□□□ -0.19
PRPF39-204ENST00000553605 ERAP2Q6P179 960 aa13.84□□□□□ -0.19
PRPF39-204ENST00000553605 ARHGAP22Q7Z5H3 698 aa13.84□□□□□ -0.19
PRPF39-204ENST00000553605 ZC3H18Q86VM9 953 aaKnown RBP13.84□□□□□ -0.19
PRPF39-204ENST00000553605 NAGSQ8N159 534 aa13.84□□□□□ -0.19
PRPF39-204ENST00000553605 TTC13Q8NBP0 860 aa13.84□□□□□ -0.19
PRPF39-204ENST00000553605 ZNF397Q8NF99 534 aaPredicted RBP13.84□□□□□ -0.19
PRPF39-204ENST00000553605 HCAR2Q8TDS4 363 aa13.84□□□□□ -0.19
PRPF39-204ENST00000553605 AHCYL2Q96HN2 611 aaKnown RBP13.84□□□□□ -0.19
PRPF39-204ENST00000553605 C5orf34Q96MH7 638 aa13.84□□□□□ -0.19
PRPF39-204ENST00000553605 TSG101Q99816 390 aa13.84□□□□□ -0.19
PRPF39-204ENST00000553605 SUDS3Q9H7L9 328 aaPredicted RBP13.84□□□□□ -0.19
PRPF39-204ENST00000553605 CARS2Q9HA77 564 aaKnown RBP13.84□□□□□ -0.19
PRPF39-204ENST00000553605 NDFIP2Q9NV92 336 aa13.84□□□□□ -0.19
PRPF39-204ENST00000553605 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP13.84□□□□□ -0.19
PRPF39-204ENST00000553605 PPARGC1AQ9UBK2 798 aaKnown RBP13.84□□□□□ -0.19
PRPF39-204ENST00000553605 CROTQ9UKG9 612 aa13.84□□□□□ -0.19
PRPF39-204ENST00000553605 STAP1Q9ULZ2 295 aa13.84□□□□□ -0.19
PRPF39-204ENST00000553605 SLC5A6Q9Y289 635 aa13.84□□□□□ -0.19
PRPF39-204ENST00000553605 ADGRG4Q8IZF6 3080 aa13.84□□□□□ -0.19
PRPF39-204ENST00000553605 ANKRD36A6QL64 1941 aa13.84□□□□□ -0.19
PRPF39-204ENST00000553605 ZNF106Q9H2Y7 1883 aaKnown RBP13.83□□□□□ -0.2
PRPF39-204ENST00000553605 PDE2AO00408 941 aaPredicted RBP13.83□□□□□ -0.2
PRPF39-204ENST00000553605 KATNA1O75449 491 aa13.83□□□□□ -0.2
PRPF39-204ENST00000553605 RECQL5O94762 991 aaPredicted RBP13.83□□□□□ -0.2
PRPF39-204ENST00000553605 ERBB2P04626 1255 aa13.83□□□□□ -0.2
PRPF39-204ENST00000553605 CMA1P23946 247 aa13.83□□□□□ -0.2
PRPF39-204ENST00000553605 PGDP52209 483 aa13.83□□□□□ -0.2
PRPF39-204ENST00000553605 SEMA5AQ13591 1074 aa13.83□□□□□ -0.2
PRPF39-204ENST00000553605 PRR30Q53SZ7 412 aaPredicted RBP13.83□□□□□ -0.2
PRPF39-204ENST00000553605 SLC30A9Q6PML9 568 aa13.83□□□□□ -0.2
PRPF39-204ENST00000553605 TP53INP2Q8IXH6 220 aa13.83□□□□□ -0.2
PRPF39-204ENST00000553605 EHBP1Q8NDI1 1231 aa13.83□□□□□ -0.2
PRPF39-204ENST00000553605 NT5C3BQ969T7 300 aa13.83□□□□□ -0.2
PRPF39-204ENST00000553605 MARVELD3Q96A59 401 aa13.83□□□□□ -0.2
PRPF39-204ENST00000553605 TBCBQ99426 244 aa13.83□□□□□ -0.2
PRPF39-204ENST00000553605 TWSG1Q9GZX9 223 aa13.83□□□□□ -0.2
PRPF39-204ENST00000553605 TMEM51Q9NW97 253 aa13.83□□□□□ -0.2
PRPF39-204ENST00000553605 TRNAU1APQ9NX07 287 aaKnown RBP13.83□□□□□ -0.2
PRPF39-204ENST00000553605 MAP10Q9P2G4 905 aa13.83□□□□□ -0.2
PRPF39-204ENST00000553605 DNAI1Q9UI46 699 aa13.83□□□□□ -0.2
PRPF39-204ENST00000553605 HPSEQ9Y251 543 aa13.83□□□□□ -0.2
PRPF39-204ENST00000553605 F8P00451 2351 aa13.83□□□□□ -0.2
PRPF39-204ENST00000553605 TNRC6AQ8NDV7 1962 aaKnown RBP13.83□□□□□ -0.2
PRPF39-204ENST00000553605 P4HA2O15460 535 aa13.82□□□□□ -0.2
PRPF39-204ENST00000553605 INSIG1O15503 277 aa13.82□□□□□ -0.2
PRPF39-204ENST00000553605 TEX33O43247 280 aa13.82□□□□□ -0.2
PRPF39-204ENST00000553605 HNRNPRO43390 633 aaKnown RBP13.82□□□□□ -0.2
PRPF39-204ENST00000553605 BUB1O43683 1085 aa13.82□□□□□ -0.2
PRPF39-204ENST00000553605 KDELR3O43731 214 aa13.82□□□□□ -0.2
PRPF39-204ENST00000553605 TMCC1O94876 653 aa13.82□□□□□ -0.2
PRPF39-204ENST00000553605 PIGNO95427 931 aa13.82□□□□□ -0.2
PRPF39-204ENST00000553605 PRCPP42785 496 aa13.82□□□□□ -0.2
PRPF39-204ENST00000553605 SYKP43405 635 aa13.82□□□□□ -0.2
PRPF39-204ENST00000553605 SNX16P57768 344 aa13.82□□□□□ -0.2
PRPF39-204ENST00000553605 PEX6Q13608 980 aa13.82□□□□□ -0.2
PRPF39-204ENST00000553605 PASD1Q8IV76 773 aa13.82□□□□□ -0.2
PRPF39-204ENST00000553605 NETO2Q8NC67 525 aa13.82□□□□□ -0.2
PRPF39-204ENST00000553605 OR10G6Q8NH81 332 aa13.82□□□□□ -0.2
PRPF39-204ENST00000553605 NCAPGQ9BPX3 1015 aa13.82□□□□□ -0.2
PRPF39-204ENST00000553605 SLC25A23Q9BV35 468 aa13.82□□□□□ -0.2
PRPF39-204ENST00000553605 TRIM55Q9BYV6 548 aa13.82□□□□□ -0.2
PRPF39-204ENST00000553605 MAGEH1Q9H213 219 aa13.82□□□□□ -0.2
PRPF39-204ENST00000553605 SUV39H2Q9H5I1 410 aa13.82□□□□□ -0.2
PRPF39-204ENST00000553605 WDR26Q9H7D7 661 aa13.82□□□□□ -0.2
PRPF39-204ENST00000553605 KCND3Q9UK17 655 aa13.82□□□□□ -0.2
PRPF39-204ENST00000553605 RCOR1Q9UKL0 485 aa13.82□□□□□ -0.2
PRPF39-204ENST00000553605 CFAP45Q9UL16 551 aa13.82□□□□□ -0.2
PRPF39-204ENST00000553605 APCP25054 2843 aa13.82□□□□□ -0.2
PRPF39-204ENST00000553605 CELSR1Q9NYQ6 3014 aa13.81□□□□□ -0.2
PRPF39-204ENST00000553605 TSPAN11A1L157 253 aa13.81□□□□□ -0.2
PRPF39-204ENST00000553605 PIPSLA2A3N6 862 aa13.81□□□□□ -0.2
PRPF39-204ENST00000553605 CFAP69A5D8W1 941 aa13.81□□□□□ -0.2
PRPF39-204ENST00000553605 CREG1O75629 220 aa13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms