RNA–Protein interactions for RNA: ENST00000553488.5

ATXN3-219, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,065 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-219ENST00000553488 IGFALSP35858 605 aa7.39□□□□□ -1.23
ATXN3-219ENST00000553488 KRT83P78385 493 aa7.39□□□□□ -1.23
ATXN3-219ENST00000553488 FKBP3Q00688 224 aaKnown RBP7.39□□□□□ -1.23
ATXN3-219ENST00000553488 TLE1Q04724 770 aa7.39□□□□□ -1.23
ATXN3-219ENST00000553488 CCDC15Q0P6D6 951 aa7.39□□□□□ -1.23
ATXN3-219ENST00000553488 C1orf61Q13536 156 aa7.39□□□□□ -1.23
ATXN3-219ENST00000553488 NFKBIBQ15653 356 aa7.39□□□□□ -1.23
ATXN3-219ENST00000553488 CPSF6Q16630 551 aaKnown RBP eCLIP7.39□□□□□ -1.23
ATXN3-219ENST00000553488 ANKRD40Q6AI12 368 aa7.39□□□□□ -1.23
ATXN3-219ENST00000553488 RRAGAQ7L523 313 aa7.39□□□□□ -1.23
ATXN3-219ENST00000553488 ZAR1Q86SH2 424 aa7.39□□□□□ -1.23
ATXN3-219ENST00000553488 ZSCAN30Q86W11 494 aa7.39□□□□□ -1.23
ATXN3-219ENST00000553488 PHACTR4Q8IZ21 702 aa7.39□□□□□ -1.23
ATXN3-219ENST00000553488 KYQ8NBH2 561 aa7.39□□□□□ -1.23
ATXN3-219ENST00000553488 ASB12Q8WXK4 309 aa7.39□□□□□ -1.23
ATXN3-219ENST00000553488 RNF34Q969K3 372 aa7.39□□□□□ -1.23
ATXN3-219ENST00000553488 FANCD2OSQ96PS1 177 aa7.39□□□□□ -1.23
ATXN3-219ENST00000553488 MED15Q96RN5 788 aa7.39□□□□□ -1.23
ATXN3-219ENST00000553488 CPXM1Q96SM3 734 aa7.39□□□□□ -1.23
ATXN3-219ENST00000553488 IL12RB2Q99665 862 aa7.39□□□□□ -1.23
ATXN3-219ENST00000553488 FUCA2Q9BTY2 467 aa7.39□□□□□ -1.23
ATXN3-219ENST00000553488 EPB41L5Q9HCM4 733 aa7.39□□□□□ -1.23
ATXN3-219ENST00000553488 ACP6Q9NPH0 428 aa7.39□□□□□ -1.23
ATXN3-219ENST00000553488 C1GALT1Q9NS00 363 aa7.39□□□□□ -1.23
ATXN3-219ENST00000553488 ASNSD1Q9NWL6 643 aa7.39□□□□□ -1.23
ATXN3-219ENST00000553488 COX16Q9P0S2 106 aa7.39□□□□□ -1.23
ATXN3-219ENST00000553488 SPASTQ9UBP0 616 aa7.39□□□□□ -1.23
ATXN3-219ENST00000553488 FAM8A1Q9UBU6 413 aa7.39□□□□□ -1.23
ATXN3-219ENST00000553488 SLC12A6Q9UHW9 1150 aa7.39□□□□□ -1.23
ATXN3-219ENST00000553488 PADI4Q9UM07 663 aa7.39□□□□□ -1.23
ATXN3-219ENST00000553488 ITM2BQ9Y287 266 aa7.39□□□□□ -1.23
ATXN3-219ENST00000553488 CELSR2Q9HCU4 2923 aa7.39□□□□□ -1.23
ATXN3-219ENST00000553488 IGLV3-10A0A075B6K4 115 aa7.38□□□□□ -1.23
ATXN3-219ENST00000553488 A0A1W2PQ27 194 aa7.38□□□□□ -1.23
ATXN3-219ENST00000553488 A0A1W2PQ64 194 aa7.38□□□□□ -1.23
ATXN3-219ENST00000553488 IGLON5A6NGN9 336 aa7.38□□□□□ -1.23
ATXN3-219ENST00000553488 FPGTO14772 594 aa7.38□□□□□ -1.23
ATXN3-219ENST00000553488 NVLO15381 856 aaKnown RBP7.38□□□□□ -1.23
ATXN3-219ENST00000553488 YY2O15391 372 aa7.38□□□□□ -1.23
ATXN3-219ENST00000553488 P4HA2O15460 535 aa7.38□□□□□ -1.23
ATXN3-219ENST00000553488 DAB1O75553 588 aa7.38□□□□□ -1.23
ATXN3-219ENST00000553488 GJB6O95452 261 aa7.38□□□□□ -1.23
ATXN3-219ENST00000553488 ADCY5O95622 1261 aa7.38□□□□□ -1.23
ATXN3-219ENST00000553488 CD160O95971 181 aa7.38□□□□□ -1.23
ATXN3-219ENST00000553488 NTRK1P04629 796 aa7.38□□□□□ -1.23
ATXN3-219ENST00000553488 TSHRP16473 764 aa7.38□□□□□ -1.23
ATXN3-219ENST00000553488 GNA15P30679 374 aa7.38□□□□□ -1.23
ATXN3-219ENST00000553488 SSTR4P31391 388 aa7.38□□□□□ -1.23
ATXN3-219ENST00000553488 L1CAMP32004 1257 aa7.38□□□□□ -1.23
ATXN3-219ENST00000553488 SERPINH1P50454 418 aaKnown RBP7.38□□□□□ -1.23
ATXN3-219ENST00000553488 CCNHP51946 323 aaPredicted RBP7.38□□□□□ -1.23
ATXN3-219ENST00000553488 ADKP55263 362 aaKnown RBP7.38□□□□□ -1.23
ATXN3-219ENST00000553488 ARF5P84085 180 aa7.38□□□□□ -1.23
ATXN3-219ENST00000553488 CDK17Q00537 523 aa7.38□□□□□ -1.23
ATXN3-219ENST00000553488 LRRC63Q05C16 580 aa7.38□□□□□ -1.23
ATXN3-219ENST00000553488 PNOCQ13519 176 aa7.38□□□□□ -1.23
ATXN3-219ENST00000553488 CLCA4Q14CN2 919 aa7.38□□□□□ -1.23
ATXN3-219ENST00000553488 TBR1Q16650 682 aa7.38□□□□□ -1.23
ATXN3-219ENST00000553488 ZNF658Q5TYW1 1059 aaPredicted RBP7.38□□□□□ -1.23
ATXN3-219ENST00000553488 OLFML1Q6UWY5 402 aa7.38□□□□□ -1.23
ATXN3-219ENST00000553488 MACC1Q6ZN28 852 aa7.38□□□□□ -1.23
ATXN3-219ENST00000553488 FAM183BPQ6ZVS7 135 aa7.38□□□□□ -1.23
ATXN3-219ENST00000553488 USP53Q70EK8 1073 aa7.38□□□□□ -1.23
ATXN3-219ENST00000553488 RAB11FIP2Q7L804 512 aa7.38□□□□□ -1.23
ATXN3-219ENST00000553488 SETD3Q86TU7 594 aaPredicted RBP7.38□□□□□ -1.23
ATXN3-219ENST00000553488 VASH2Q86V25 355 aa7.38□□□□□ -1.23
ATXN3-219ENST00000553488 DTX1Q86Y01 620 aa7.38□□□□□ -1.23
ATXN3-219ENST00000553488 SDR16C5Q8N3Y7 309 aa7.38□□□□□ -1.23
ATXN3-219ENST00000553488 FBXO39Q8N4B4 442 aa7.38□□□□□ -1.23
ATXN3-219ENST00000553488 WDTC1Q8N5D0 677 aa7.38□□□□□ -1.23
ATXN3-219ENST00000553488 PCDH20Q8N6Y1 951 aaKnown RBP7.38□□□□□ -1.23
ATXN3-219ENST00000553488 ARL10Q8N8L6 244 aa7.38□□□□□ -1.23
ATXN3-219ENST00000553488 OR7D4Q8NG98 312 aa7.38□□□□□ -1.23
ATXN3-219ENST00000553488 PCDH19Q8TAB3 1148 aa7.38□□□□□ -1.23
ATXN3-219ENST00000553488 BTN2A2Q8WVV5 523 aa7.38□□□□□ -1.23
ATXN3-219ENST00000553488 ZNF606Q8WXB4 792 aa7.38□□□□□ -1.23
ATXN3-219ENST00000553488 SNX21Q969T3 373 aa7.38□□□□□ -1.23
ATXN3-219ENST00000553488 CENPTQ96BT3 561 aa7.38□□□□□ -1.23
ATXN3-219ENST00000553488 FEM1CQ96JP0 617 aa7.38□□□□□ -1.23
ATXN3-219ENST00000553488 PPP1R13BQ96KQ4 1090 aa7.38□□□□□ -1.23
ATXN3-219ENST00000553488 SPATA32Q96LK8 384 aa7.38□□□□□ -1.23
ATXN3-219ENST00000553488 TSG101Q99816 390 aa7.38□□□□□ -1.23
ATXN3-219ENST00000553488 YIPF2Q9BWQ6 316 aa7.38□□□□□ -1.23
ATXN3-219ENST00000553488 SRRTQ9BXP5 876 aaKnown RBP7.38□□□□□ -1.23
ATXN3-219ENST00000553488 FOXP3Q9BZS1 431 aa7.38□□□□□ -1.23
ATXN3-219ENST00000553488 CEP44Q9C0F1 390 aa7.38□□□□□ -1.23
ATXN3-219ENST00000553488 SYNDIG1Q9H7V2 258 aa7.38□□□□□ -1.23
ATXN3-219ENST00000553488 PIGVQ9NUD9 493 aa7.38□□□□□ -1.23
ATXN3-219ENST00000553488 ARHGEF38Q9NXL2 777 aa7.38□□□□□ -1.23
ATXN3-219ENST00000553488 FOXJ2Q9P0K8 574 aa7.38□□□□□ -1.23
ATXN3-219ENST00000553488 AP4E1Q9UPM8 1137 aa7.38□□□□□ -1.23
ATXN3-219ENST00000553488 SNX10Q9Y5X0 201 aa7.38□□□□□ -1.23
ATXN3-219ENST00000553488 ACTL7AQ9Y615 435 aa7.38□□□□□ -1.23
ATXN3-219ENST00000553488 HIVEP3Q5T1R4 2406 aa7.38□□□□□ -1.23
ATXN3-219ENST00000553488 ABCA12Q86UK0 2595 aa7.37□□□□□ -1.23
ATXN3-219ENST00000553488 PRAMEF33A0A0G2JMD5 474 aa7.37□□□□□ -1.23
ATXN3-219ENST00000553488 DRGXA6NNA5 263 aa7.37□□□□□ -1.23
ATXN3-219ENST00000553488 BECN2A8MW95 431 aa7.37□□□□□ -1.23
ATXN3-219ENST00000553488 AREL1O15033 823 aa7.37□□□□□ -1.23
ATXN3-219ENST00000553488 TSPAN6O43657 245 aa7.37□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms