RNA–Protein interactions for RNA: ENST00000553447.6

PSEN1-206, Transcript of presenilin 1, humanhuman

TSL 4

Gene PSEN1, Length 572 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-206ENST00000553447 TRIM49D1C9J1S8 452 aa17.63■□□□□ 0.41
PSEN1-206ENST00000553447 CCL22O00626 93 aa17.63■□□□□ 0.41
PSEN1-206ENST00000553447 CREB1P16220 341 aa17.63■□□□□ 0.41
PSEN1-206ENST00000553447 GALK1P51570 392 aa17.63■□□□□ 0.41
PSEN1-206ENST00000553447 CSE1LP55060 971 aaKnown RBP17.63■□□□□ 0.41
PSEN1-206ENST00000553447 PRAMEP78395 509 aa17.63■□□□□ 0.41
PSEN1-206ENST00000553447 CBX1P83916 185 aa17.63■□□□□ 0.41
PSEN1-206ENST00000553447 BMPR2Q13873 1038 aa17.63■□□□□ 0.41
PSEN1-206ENST00000553447 HNRNPA1L2Q32P51 320 aaKnown RBP17.63■□□□□ 0.41
PSEN1-206ENST00000553447 ARSIQ5FYB1 569 aa17.63■□□□□ 0.41
PSEN1-206ENST00000553447 NEPROQ6NW34 567 aa17.63■□□□□ 0.41
PSEN1-206ENST00000553447 SUGP1Q8IWZ8 645 aaKnown RBP17.63■□□□□ 0.41
PSEN1-206ENST00000553447 NDUFAF2Q8N183 169 aa17.63■□□□□ 0.41
PSEN1-206ENST00000553447 OR4K2Q8NGD2 314 aa17.63■□□□□ 0.41
PSEN1-206ENST00000553447 GABPB2Q8TAK5 448 aaPredicted RBP17.63■□□□□ 0.41
PSEN1-206ENST00000553447 CALML6Q8TD86 181 aa17.63■□□□□ 0.41
PSEN1-206ENST00000553447 HLA-CQ95604 372 aa17.63■□□□□ 0.41
PSEN1-206ENST00000553447 TBATAQ96M53 351 aa17.63■□□□□ 0.41
PSEN1-206ENST00000553447 KLHL32Q96NJ5 620 aa17.63■□□□□ 0.41
PSEN1-206ENST00000553447 RBBP8Q99708 897 aa17.63■□□□□ 0.41
PSEN1-206ENST00000553447 P2RY13Q9BPV8 354 aa17.63■□□□□ 0.41
PSEN1-206ENST00000553447 MFSD1Q9H3U5 465 aa17.63■□□□□ 0.41
PSEN1-206ENST00000553447 KCNK12Q9HB15 430 aa17.63■□□□□ 0.41
PSEN1-206ENST00000553447 FBRSL1Q9HCM7 1045 aaKnown RBP17.63■□□□□ 0.41
PSEN1-206ENST00000553447 POLR3BQ9NW08 1133 aaPredicted RBP17.63■□□□□ 0.41
PSEN1-206ENST00000553447 LIMD1Q9UGP4 676 aa17.63■□□□□ 0.41
PSEN1-206ENST00000553447 HCN2Q9UL51 889 aa17.63■□□□□ 0.41
PSEN1-206ENST00000553447 PPIL1Q9Y3C6 166 aa17.63■□□□□ 0.41
PSEN1-206ENST00000553447 TSPAN11A1L157 253 aa17.62■□□□□ 0.41
PSEN1-206ENST00000553447 HMX2A2RU54 273 aa17.62■□□□□ 0.41
PSEN1-206ENST00000553447 CCDC162PA2VCL2 907 aa17.62■□□□□ 0.41
PSEN1-206ENST00000553447 LEFTY1O75610 366 aa17.62■□□□□ 0.41
PSEN1-206ENST00000553447 SLC4A1P02730 911 aa17.62■□□□□ 0.41
PSEN1-206ENST00000553447 MT-ND3P03897 115 aa17.62■□□□□ 0.41
PSEN1-206ENST00000553447 CTSLP07711 333 aa17.62■□□□□ 0.41
PSEN1-206ENST00000553447 HLA-EP13747 358 aa17.62■□□□□ 0.41
PSEN1-206ENST00000553447 BRAFP15056 766 aa17.62■□□□□ 0.41
PSEN1-206ENST00000553447 HNF1BP35680 557 aa17.62■□□□□ 0.41
PSEN1-206ENST00000553447 ATP1A2P50993 1020 aa17.62■□□□□ 0.41
PSEN1-206ENST00000553447 SMAD2Q15796 467 aaKnown RBP17.62■□□□□ 0.41
PSEN1-206ENST00000553447 C9orf64Q5T6V5 341 aa17.62■□□□□ 0.41
PSEN1-206ENST00000553447 EGFLAMQ63HQ2 1017 aa17.62■□□□□ 0.41
PSEN1-206ENST00000553447 BRAT1Q6PJG6 821 aa17.62■□□□□ 0.41
PSEN1-206ENST00000553447 SERPINA13PQ6UXR4 307 aa17.62■□□□□ 0.41
PSEN1-206ENST00000553447 MICALCLQ6ZW33 695 aa17.62■□□□□ 0.41
PSEN1-206ENST00000553447 LYSMD3Q7Z3D4 306 aa17.62■□□□□ 0.41
PSEN1-206ENST00000553447 LMNTD2Q8IXW0 634 aa17.62■□□□□ 0.41
PSEN1-206ENST00000553447 SLC44A3Q8N4M1 653 aa17.62■□□□□ 0.41
PSEN1-206ENST00000553447 C2CD4AQ8NCU7 369 aaPredicted RBP17.62■□□□□ 0.41
PSEN1-206ENST00000553447 OR6P1Q8NGX9 317 aa17.62■□□□□ 0.41
PSEN1-206ENST00000553447 CDKN2AIPNLQ96HQ2 116 aa17.62■□□□□ 0.41
PSEN1-206ENST00000553447 LYSMD1Q96S90 227 aa17.62■□□□□ 0.41
PSEN1-206ENST00000553447 SELENOSQ9BQE4 189 aa17.62■□□□□ 0.41
PSEN1-206ENST00000553447 MCMBPQ9BTE3 642 aa17.62■□□□□ 0.41
PSEN1-206ENST00000553447 GPR63Q9BZJ6 419 aa17.62■□□□□ 0.41
PSEN1-206ENST00000553447 STARD13Q9Y3M8 1113 aa17.62■□□□□ 0.41
PSEN1-206ENST00000553447 CKAP5Q14008 2032 aa17.62■□□□□ 0.41
PSEN1-206ENST00000553447 SPECC1L-ADORA2AF8WAN1 911 aa17.61■□□□□ 0.41
PSEN1-206ENST00000553447 STX7O15400 261 aaKnown RBP17.61■□□□□ 0.41
PSEN1-206ENST00000553447 GOT2P00505 430 aaKnown RBP17.61■□□□□ 0.41
PSEN1-206ENST00000553447 ITGA2BP08514 1039 aa17.61■□□□□ 0.41
PSEN1-206ENST00000553447 F7P08709 466 aaPredicted RBP17.61■□□□□ 0.41
PSEN1-206ENST00000553447 CTHP32929 405 aa17.61■□□□□ 0.41
PSEN1-206ENST00000553447 SPRP35270 261 aaPredicted RBP17.61■□□□□ 0.41
PSEN1-206ENST00000553447 IL12RB1P42701 662 aa17.61■□□□□ 0.41
PSEN1-206ENST00000553447 SLC1A2P43004 574 aa17.61■□□□□ 0.41
PSEN1-206ENST00000553447 TNFRSF4P43489 277 aa17.61■□□□□ 0.41
PSEN1-206ENST00000553447 LIMK2P53671 638 aa17.61■□□□□ 0.41
PSEN1-206ENST00000553447 POLR2LP62875 67 aaKnown RBP17.61■□□□□ 0.41
PSEN1-206ENST00000553447 DNAJC3Q13217 504 aa17.61■□□□□ 0.41
PSEN1-206ENST00000553447 CDKN3Q16667 212 aa17.61■□□□□ 0.41
PSEN1-206ENST00000553447 UGP2Q16851 508 aa17.61■□□□□ 0.41
PSEN1-206ENST00000553447 LEXMQ3ZCV2 418 aa17.61■□□□□ 0.41
PSEN1-206ENST00000553447 MROH9Q5TGP6 573 aa17.61■□□□□ 0.41
PSEN1-206ENST00000553447 ZNF470Q6ECI4 717 aa17.61■□□□□ 0.41
PSEN1-206ENST00000553447 TIFABQ6ZNK6 161 aa17.61■□□□□ 0.41
PSEN1-206ENST00000553447 KIAA0408Q6ZU52 694 aa17.61■□□□□ 0.41
PSEN1-206ENST00000553447 USP45Q70EL2 814 aa17.61■□□□□ 0.41
PSEN1-206ENST00000553447 DENND6AQ8IWF6 608 aa17.61■□□□□ 0.41
PSEN1-206ENST00000553447 STK40Q8N2I9 435 aa17.61■□□□□ 0.41
PSEN1-206ENST00000553447 HCAR2Q8TDS4 363 aa17.61■□□□□ 0.41
PSEN1-206ENST00000553447 OR8D1Q8WZ84 308 aa17.61■□□□□ 0.41
PSEN1-206ENST00000553447 DNASE1L2Q92874 299 aa17.61■□□□□ 0.41
PSEN1-206ENST00000553447 SCRN2Q96FV2 425 aa17.61■□□□□ 0.41
PSEN1-206ENST00000553447 SERAC1Q96JX3 654 aa17.61■□□□□ 0.41
PSEN1-206ENST00000553447 MCCC1Q96RQ3 725 aaPredicted RBP17.61■□□□□ 0.41
PSEN1-206ENST00000553447 SMC6Q96SB8 1091 aa17.61■□□□□ 0.41
PSEN1-206ENST00000553447 SUDS3Q9H7L9 328 aaPredicted RBP17.61■□□□□ 0.41
PSEN1-206ENST00000553447 CNOT10Q9H9A5 744 aaKnown RBP17.61■□□□□ 0.41
PSEN1-206ENST00000553447 IL17CQ9P0M4 197 aa17.61■□□□□ 0.41
PSEN1-206ENST00000553447 DKK3Q9UBP4 350 aa17.61■□□□□ 0.41
PSEN1-206ENST00000553447 FBXO5Q9UKT4 447 aa17.61■□□□□ 0.41
PSEN1-206ENST00000553447 A0A0U1RQS6 177 aa17.6■□□□□ 0.41
PSEN1-206ENST00000553447 C1orf232A0A0U1RR37 186 aa17.6■□□□□ 0.41
PSEN1-206ENST00000553447 ANTXRLA6NF34 631 aa17.6■□□□□ 0.41
PSEN1-206ENST00000553447 OR51F1A6NGY5 319 aa17.6■□□□□ 0.41
PSEN1-206ENST00000553447 NPIPB15A6NHN6 443 aaPredicted RBP17.6■□□□□ 0.41
PSEN1-206ENST00000553447 PRNPP04156 253 aa17.6■□□□□ 0.41
PSEN1-206ENST00000553447 HNRNPLP14866 589 aaKnown RBP eCLIP17.6■□□□□ 0.41
PSEN1-206ENST00000553447 KRT4P19013 534 aa17.6■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms