RNA–Protein interactions for RNA: ENST00000553324.5

SHMT2-204, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 566 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-204ENST00000553324 GOLPH3Q9H4A6 298 aa15.38■□□□□ 0.05
SHMT2-204ENST00000553324 PCDH9Q9HC56 1237 aa15.38■□□□□ 0.05
SHMT2-204ENST00000553324 NLGN3Q9NZ94 848 aa15.38■□□□□ 0.05
SHMT2-204ENST00000553324 SPASTQ9UBP0 616 aa15.38■□□□□ 0.05
SHMT2-204ENST00000553324 WASF3Q9UPY6 502 aa15.38■□□□□ 0.05
SHMT2-204ENST00000553324 NEUROG3Q9Y4Z2 214 aa15.38■□□□□ 0.05
SHMT2-204ENST00000553324 hCG_1818297A0A087WSY0 165 aa15.37■□□□□ 0.05
SHMT2-204ENST00000553324 FAM221BA6H8Z2 402 aa15.37■□□□□ 0.05
SHMT2-204ENST00000553324 A8MX80 341 aa15.37■□□□□ 0.05
SHMT2-204ENST00000553324 HACD1B0YJ81 288 aa15.37■□□□□ 0.05
SHMT2-204ENST00000553324 CACNB4O00305 520 aaPredicted RBP15.37■□□□□ 0.05
SHMT2-204ENST00000553324 DKK1O94907 266 aa15.37■□□□□ 0.05
SHMT2-204ENST00000553324 PDHA1P08559 390 aa15.37■□□□□ 0.05
SHMT2-204ENST00000553324 ATXN1LP0C7T5 689 aaKnown RBP15.37■□□□□ 0.05
SHMT2-204ENST00000553324 ZNF30P17039 623 aa15.37■□□□□ 0.05
SHMT2-204ENST00000553324 CKMT2P17540 419 aa15.37■□□□□ 0.05
SHMT2-204ENST00000553324 CTNNA2P26232 953 aa15.37■□□□□ 0.05
SHMT2-204ENST00000553324 TRIM23P36406 574 aa15.37■□□□□ 0.05
SHMT2-204ENST00000553324 SEMG2Q02383 582 aa15.37■□□□□ 0.05
SHMT2-204ENST00000553324 PPARDQ03181 441 aa15.37■□□□□ 0.05
SHMT2-204ENST00000553324 ZNF542PQ5EBM4 170 aa15.37■□□□□ 0.05
SHMT2-204ENST00000553324 FAXCQ5TGI0 409 aa15.37■□□□□ 0.05
SHMT2-204ENST00000553324 NT5DC3Q86UY8 548 aa15.37■□□□□ 0.05
SHMT2-204ENST00000553324 GALNT15Q8N3T1 639 aa15.37■□□□□ 0.05
SHMT2-204ENST00000553324 SDR16C5Q8N3Y7 309 aa15.37■□□□□ 0.05
SHMT2-204ENST00000553324 CHCHD4Q8N4Q1 142 aa15.37■□□□□ 0.05
SHMT2-204ENST00000553324 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP15.37■□□□□ 0.05
SHMT2-204ENST00000553324 RNF10Q8N5U6 811 aaKnown RBP15.37■□□□□ 0.05
SHMT2-204ENST00000553324 CNTD1Q8N815 330 aa15.37■□□□□ 0.05
SHMT2-204ENST00000553324 PNPLA1Q8N8W4 532 aa15.37■□□□□ 0.05
SHMT2-204ENST00000553324 CCDC112Q8NEF3 446 aa15.37■□□□□ 0.05
SHMT2-204ENST00000553324 OR4C6Q8NH72 309 aa15.37■□□□□ 0.05
SHMT2-204ENST00000553324 COQ10AQ96MF6 247 aa15.37■□□□□ 0.05
SHMT2-204ENST00000553324 VAT1Q99536 393 aa15.37■□□□□ 0.05
SHMT2-204ENST00000553324 SCNM1Q9BWG6 230 aa15.37■□□□□ 0.05
SHMT2-204ENST00000553324 TDRD1Q9BXT4 1180 aaKnown RBP15.37■□□□□ 0.05
SHMT2-204ENST00000553324 TSGA10Q9BZW7 698 aa15.37■□□□□ 0.05
SHMT2-204ENST00000553324 SLC25A51Q9H1U9 297 aa15.37■□□□□ 0.05
SHMT2-204ENST00000553324 USP29Q9HBJ7 922 aa15.37■□□□□ 0.05
SHMT2-204ENST00000553324 TOR4AQ9NXH8 423 aa15.37■□□□□ 0.05
SHMT2-204ENST00000553324 NCKIPSDQ9NZQ3 722 aa15.37■□□□□ 0.05
SHMT2-204ENST00000553324 SEPT10Q9P0V9 454 aa15.37■□□□□ 0.05
SHMT2-204ENST00000553324 AMFRQ9UKV5 643 aa15.37■□□□□ 0.05
SHMT2-204ENST00000553324 CHKBQ9Y259 395 aa15.37■□□□□ 0.05
SHMT2-204ENST00000553324 A0A0J9YYE9 177 aa15.36■□□□□ 0.05
SHMT2-204ENST00000553324 GOLGA8CPA6NN73 597 aa15.36■□□□□ 0.05
SHMT2-204ENST00000553324 TPP1O14773 563 aa15.36■□□□□ 0.05
SHMT2-204ENST00000553324 HYAL3O43820 417 aaPredicted RBP15.36■□□□□ 0.05
SHMT2-204ENST00000553324 ZNF189O75820 626 aaPredicted RBP15.36■□□□□ 0.05
SHMT2-204ENST00000553324 TRBC1P01850 177 aa15.36■□□□□ 0.05
SHMT2-204ENST00000553324 PCCBP05166 539 aa15.36■□□□□ 0.05
SHMT2-204ENST00000553324 HNF1BP35680 557 aa15.36■□□□□ 0.05
SHMT2-204ENST00000553324 CD86P42081 329 aa15.36■□□□□ 0.05
SHMT2-204ENST00000553324 DUSP3P51452 185 aaPredicted RBP15.36■□□□□ 0.05
SHMT2-204ENST00000553324 NIPAL4Q0D2K0 466 aa15.36■□□□□ 0.05
SHMT2-204ENST00000553324 ZBTB17Q13105 803 aa15.36■□□□□ 0.05
SHMT2-204ENST00000553324 EIF2B5Q13144 721 aaKnown RBP15.36■□□□□ 0.05
SHMT2-204ENST00000553324 XRCC4Q13426 336 aa15.36■□□□□ 0.05
SHMT2-204ENST00000553324 NFATC4Q14934 902 aa15.36■□□□□ 0.05
SHMT2-204ENST00000553324 SLC14A2Q15849 920 aa15.36■□□□□ 0.05
SHMT2-204ENST00000553324 CNGA3Q16281 694 aa15.36■□□□□ 0.05
SHMT2-204ENST00000553324 CCDC181Q5TID7 509 aa15.36■□□□□ 0.05
SHMT2-204ENST00000553324 ESRP1Q6NXG1 681 aaKnown RBP15.36■□□□□ 0.05
SHMT2-204ENST00000553324 PNCKQ6P2M8 343 aa15.36■□□□□ 0.05
SHMT2-204ENST00000553324 ENPP7Q6UWV6 458 aa15.36■□□□□ 0.05
SHMT2-204ENST00000553324 BBS12Q6ZW61 710 aa15.36■□□□□ 0.05
SHMT2-204ENST00000553324 PEX26Q7Z412 305 aa15.36■□□□□ 0.05
SHMT2-204ENST00000553324 NLRP8Q86W28 1048 aa15.36■□□□□ 0.05
SHMT2-204ENST00000553324 UBL4BQ8N7F7 174 aa15.36■□□□□ 0.05
SHMT2-204ENST00000553324 LRRC57Q8N9N7 239 aa15.36■□□□□ 0.05
SHMT2-204ENST00000553324 FAM181AQ8N9Y4 354 aa15.36■□□□□ 0.05
SHMT2-204ENST00000553324 LRRN4Q8WUT4 740 aa15.36■□□□□ 0.05
SHMT2-204ENST00000553324 KRT35Q92764 455 aa15.36■□□□□ 0.05
SHMT2-204ENST00000553324 NUS1Q96E22 293 aa15.36■□□□□ 0.05
SHMT2-204ENST00000553324 AGAP3Q96P47 875 aa15.36■□□□□ 0.05
SHMT2-204ENST00000553324 LYSMD1Q96S90 227 aa15.36■□□□□ 0.05
SHMT2-204ENST00000553324 SAE1Q9UBE0 346 aaPredicted RBP15.36■□□□□ 0.05
SHMT2-204ENST00000553324 APOBEC3BQ9UH17 382 aaKnown RBP15.36■□□□□ 0.05
SHMT2-204ENST00000553324 MSRB2Q9Y3D2 182 aa15.36■□□□□ 0.05
SHMT2-204ENST00000553324 MACROD2A1Z1Q3 448 aa15.35■□□□□ 0.05
SHMT2-204ENST00000553324 NPIPB15A6NHN6 443 aaPredicted RBP15.35■□□□□ 0.05
SHMT2-204ENST00000553324 MIF4GDA9UHW6 222 aaKnown RBP15.35■□□□□ 0.05
SHMT2-204ENST00000553324 ANKRD66B4E2M5 251 aa15.35■□□□□ 0.05
SHMT2-204ENST00000553324 APOC4-APOC2K7ER74 178 aa15.35■□□□□ 0.05
SHMT2-204ENST00000553324 ARHGAP6O43182 974 aa15.35■□□□□ 0.05
SHMT2-204ENST00000553324 AQP9O43315 295 aa15.35■□□□□ 0.05
SHMT2-204ENST00000553324 SIGLEC6O43699 453 aa15.35■□□□□ 0.05
SHMT2-204ENST00000553324 NRDCO43847 1150 aa15.35■□□□□ 0.05
SHMT2-204ENST00000553324 TJP3O95049 919 aa15.35■□□□□ 0.05
SHMT2-204ENST00000553324 RASGRP1O95267 797 aa15.35■□□□□ 0.05
SHMT2-204ENST00000553324 TNFP01375 233 aa15.35■□□□□ 0.05
SHMT2-204ENST00000553324 APOC2P02655 101 aa15.35■□□□□ 0.05
SHMT2-204ENST00000553324 PYGLP06737 847 aa15.35■□□□□ 0.05
SHMT2-204ENST00000553324 TSHRP16473 764 aa15.35■□□□□ 0.05
SHMT2-204ENST00000553324 CTPS1P17812 591 aa15.35■□□□□ 0.05
SHMT2-204ENST00000553324 TEAD1P28347 426 aa15.35■□□□□ 0.05
SHMT2-204ENST00000553324 PTPN7P35236 360 aa15.35■□□□□ 0.05
SHMT2-204ENST00000553324 KIAA1024LP59773 190 aa15.35■□□□□ 0.05
SHMT2-204ENST00000553324 SKOR1P84550 965 aa15.35■□□□□ 0.05
SHMT2-204ENST00000553324 DPTQ07507 201 aa15.35■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms