RNA–Protein interactions for RNA: ENST00000553280.1

SCFD1-209, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 574 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-209ENST00000553280 SOWAHAQ2M3V2 549 aa5.18□□□□□ -1.58
SCFD1-209ENST00000553280 SLC9C1Q4G0N8 1177 aa5.18□□□□□ -1.58
SCFD1-209ENST00000553280 CDONQ4KMG0 1287 aa5.18□□□□□ -1.58
SCFD1-209ENST00000553280 ESCO2Q56NI9 601 aa5.18□□□□□ -1.58
SCFD1-209ENST00000553280 PRAMEF19Q5SWL8 479 aa5.18□□□□□ -1.58
SCFD1-209ENST00000553280 ERMARDQ5T6L9 678 aa5.18□□□□□ -1.58
SCFD1-209ENST00000553280 PLEKHA7Q6IQ23 1121 aa5.18□□□□□ -1.58
SCFD1-209ENST00000553280 FBXO46Q6PJ61 603 aaPredicted RBP5.18□□□□□ -1.58
SCFD1-209ENST00000553280 QSOX2Q6ZRP7 698 aa5.18□□□□□ -1.58
SCFD1-209ENST00000553280 HAPLN4Q86UW8 402 aa5.18□□□□□ -1.58
SCFD1-209ENST00000553280 LRRC57Q8N9N7 239 aa5.18□□□□□ -1.58
SCFD1-209ENST00000553280 APPL2Q8NEU8 664 aa5.18□□□□□ -1.58
SCFD1-209ENST00000553280 SEMA6DQ8NFY4 1073 aa5.18□□□□□ -1.58
SCFD1-209ENST00000553280 HUS1BQ8NHY5 278 aa5.18□□□□□ -1.58
SCFD1-209ENST00000553280 IGFBPL1Q8WX77 278 aa5.18□□□□□ -1.58
SCFD1-209ENST00000553280 SLC41A2Q96JW4 573 aa5.18□□□□□ -1.58
SCFD1-209ENST00000553280 PPP1R13BQ96KQ4 1090 aa5.18□□□□□ -1.58
SCFD1-209ENST00000553280 FAM110AQ9BQ89 295 aa5.18□□□□□ -1.58
SCFD1-209ENST00000553280 TMEM47Q9BQJ4 181 aa5.18□□□□□ -1.58
SCFD1-209ENST00000553280 TUBB6Q9BUF5 446 aa5.18□□□□□ -1.58
SCFD1-209ENST00000553280 KIFC3Q9BVG8 833 aa5.18□□□□□ -1.58
SCFD1-209ENST00000553280 SCNM1Q9BWG6 230 aa5.18□□□□□ -1.58
SCFD1-209ENST00000553280 IFIH1Q9BYX4 1025 aaKnown RBP5.18□□□□□ -1.58
SCFD1-209ENST00000553280 EDEM3Q9BZQ6 932 aa5.18□□□□□ -1.58
SCFD1-209ENST00000553280 RSPH9Q9H1X1 276 aaPredicted RBP5.18□□□□□ -1.58
SCFD1-209ENST00000553280 HRH4Q9H3N8 390 aa5.18□□□□□ -1.58
SCFD1-209ENST00000553280 DECR2Q9NUI1 292 aa5.18□□□□□ -1.58
SCFD1-209ENST00000553280 C5AR2Q9P296 337 aa5.18□□□□□ -1.58
SCFD1-209ENST00000553280 EXO1Q9UQ84 846 aaKnown RBP5.18□□□□□ -1.58
SCFD1-209ENST00000553280 TRBV5-3A0A0A0MS03 114 aa5.17□□□□□ -1.58
SCFD1-209ENST00000553280 LRRC72A6NJI9 287 aa5.17□□□□□ -1.58
SCFD1-209ENST00000553280 F8W810 466 aa5.17□□□□□ -1.58
SCFD1-209ENST00000553280 TBCAO75347 108 aaKnown RBP5.17□□□□□ -1.58
SCFD1-209ENST00000553280 DAB1O75553 588 aa5.17□□□□□ -1.58
SCFD1-209ENST00000553280 JRKO75564 520 aa5.17□□□□□ -1.58
SCFD1-209ENST00000553280 MMP2P08253 660 aa5.17□□□□□ -1.58
SCFD1-209ENST00000553280 MMP3P08254 477 aa5.17□□□□□ -1.58
SCFD1-209ENST00000553280 TRIM21P19474 475 aaKnown RBP5.17□□□□□ -1.58
SCFD1-209ENST00000553280 LIG4P49917 911 aa5.17□□□□□ -1.58
SCFD1-209ENST00000553280 KRT83P78385 493 aa5.17□□□□□ -1.58
SCFD1-209ENST00000553280 KRTAP1-1Q07627 177 aa5.17□□□□□ -1.58
SCFD1-209ENST00000553280 CAPSQ13938 189 aa5.17□□□□□ -1.58
SCFD1-209ENST00000553280 LPIN1Q14693 890 aa5.17□□□□□ -1.58
SCFD1-209ENST00000553280 ARHGEF6Q15052 776 aa5.17□□□□□ -1.58
SCFD1-209ENST00000553280 C9orf152Q5JTZ5 239 aa5.17□□□□□ -1.58
SCFD1-209ENST00000553280 KRT79Q5XKE5 535 aa5.17□□□□□ -1.58
SCFD1-209ENST00000553280 LINGO2Q7L985 606 aa5.17□□□□□ -1.58
SCFD1-209ENST00000553280 TSPAN33Q86UF1 283 aa5.17□□□□□ -1.58
SCFD1-209ENST00000553280 SLC35F3Q8IY50 421 aa5.17□□□□□ -1.58
SCFD1-209ENST00000553280 RBFAQ8N0V3 343 aa5.17□□□□□ -1.58
SCFD1-209ENST00000553280 MINDY1Q8N5J2 469 aa5.17□□□□□ -1.58
SCFD1-209ENST00000553280 KDM1BQ8NB78 822 aa5.17□□□□□ -1.58
SCFD1-209ENST00000553280 BEST2Q8NFU1 509 aa5.17□□□□□ -1.58
SCFD1-209ENST00000553280 OR14L1PQ8NHC6 308 aa5.17□□□□□ -1.58
SCFD1-209ENST00000553280 ZNF653Q96CK0 615 aa5.17□□□□□ -1.58
SCFD1-209ENST00000553280 TMCO6Q96DC7 493 aa5.17□□□□□ -1.58
SCFD1-209ENST00000553280 SPATA17Q96L03 361 aa5.17□□□□□ -1.58
SCFD1-209ENST00000553280 SH2D3AQ9BRG2 576 aa5.17□□□□□ -1.58
SCFD1-209ENST00000553280 ADPGKQ9BRR6 497 aa5.17□□□□□ -1.58
SCFD1-209ENST00000553280 MRGBPQ9NV56 204 aa5.17□□□□□ -1.58
SCFD1-209ENST00000553280 TMEM45AQ9NWC5 275 aa5.17□□□□□ -1.58
SCFD1-209ENST00000553280 PSD3Q9NYI0 1048 aa5.17□□□□□ -1.58
SCFD1-209ENST00000553280 PPIEQ9UNP9 301 aaKnown RBP5.17□□□□□ -1.58
SCFD1-209ENST00000553280 NFE2L3Q9Y4A8 694 aa5.17□□□□□ -1.58
SCFD1-209ENST00000553280 INSL6Q9Y581 213 aa5.17□□□□□ -1.58
SCFD1-209ENST00000553280 TRPV2Q9Y5S1 764 aa5.17□□□□□ -1.58
SCFD1-209ENST00000553280 WDR17Q8IZU2 1322 aa5.17□□□□□ -1.58
SCFD1-209ENST00000553280 A0A1B0GVM2 712 aa5.16□□□□□ -1.58
SCFD1-209ENST00000553280 AVILO75366 819 aa5.16□□□□□ -1.58
SCFD1-209ENST00000553280 MTA2O94776 668 aa5.16□□□□□ -1.58
SCFD1-209ENST00000553280 AFPP02771 609 aaKnown RBP5.16□□□□□ -1.58
SCFD1-209ENST00000553280 TPOP07202 933 aa5.16□□□□□ -1.58
SCFD1-209ENST00000553280 VDRP11473 427 aa5.16□□□□□ -1.58
SCFD1-209ENST00000553280 SCG2P13521 617 aa5.16□□□□□ -1.58
SCFD1-209ENST00000553280 ACADLP28330 430 aa5.16□□□□□ -1.58
SCFD1-209ENST00000553280 TAS2R40P59535 323 aa5.16□□□□□ -1.58
SCFD1-209ENST00000553280 SORDQ00796 357 aa5.16□□□□□ -1.58
SCFD1-209ENST00000553280 FAM27E3Q08E93 113 aa5.16□□□□□ -1.58
SCFD1-209ENST00000553280 NAE1Q13564 534 aa5.16□□□□□ -1.58
SCFD1-209ENST00000553280 GRAPQ13588 217 aa5.16□□□□□ -1.58
SCFD1-209ENST00000553280 TMEM119Q4V9L6 283 aa5.16□□□□□ -1.58
SCFD1-209ENST00000553280 PIK3CD-AS1Q5SR53 167 aa5.16□□□□□ -1.58
SCFD1-209ENST00000553280 LRIF1Q5T3J3 769 aa5.16□□□□□ -1.58
SCFD1-209ENST00000553280 STRIP1Q5VSL9 837 aa5.16□□□□□ -1.58
SCFD1-209ENST00000553280 IL27RAQ6UWB1 636 aa5.16□□□□□ -1.58
SCFD1-209ENST00000553280 PLPPR4Q7Z2D5 763 aa5.16□□□□□ -1.58
SCFD1-209ENST00000553280 GALNTL5Q7Z4T8 443 aa5.16□□□□□ -1.58
SCFD1-209ENST00000553280 SLFN11Q7Z7L1 901 aa5.16□□□□□ -1.58
SCFD1-209ENST00000553280 ARHGEF25Q86VW2 580 aa5.16□□□□□ -1.58
SCFD1-209ENST00000553280 GALNT13Q8IUC8 556 aa5.16□□□□□ -1.58
SCFD1-209ENST00000553280 MCEMP1Q8IX19 187 aa5.16□□□□□ -1.58
SCFD1-209ENST00000553280 CCDC13Q8IYE1 715 aa5.16□□□□□ -1.58
SCFD1-209ENST00000553280 PARP16Q8N5Y8 322 aa5.16□□□□□ -1.58
SCFD1-209ENST00000553280 ZBTB2Q8N680 514 aa5.16□□□□□ -1.58
SCFD1-209ENST00000553280 HORMAD2Q8N7B1 307 aa5.16□□□□□ -1.58
SCFD1-209ENST00000553280 DUSP19Q8WTR2 217 aa5.16□□□□□ -1.58
SCFD1-209ENST00000553280 IGSF8Q969P0 613 aa5.16□□□□□ -1.58
SCFD1-209ENST00000553280 OTULINQ96BN8 352 aa5.16□□□□□ -1.58
SCFD1-209ENST00000553280 HARBI1Q96MB7 349 aa5.16□□□□□ -1.58
SCFD1-209ENST00000553280 PAFAH2Q99487 392 aa5.16□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms