RNA–Protein interactions for RNA: ENST00000553011.5

PTCH1-226, Transcript of patched 1, humanhuman

TSL 1 (best)

Gene PTCH1, Length 1,037 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-226ENST00000553011 USP45Q70EL2 814 aa14.16□□□□□ -0.14
PTCH1-226ENST00000553011 ABI3BPQ7Z7G0 1075 aa14.16□□□□□ -0.14
PTCH1-226ENST00000553011 TP53I13Q8NBR0 393 aaPredicted RBP14.16□□□□□ -0.14
PTCH1-226ENST00000553011 DENND6BQ8NEG7 585 aa14.16□□□□□ -0.14
PTCH1-226ENST00000553011 OR13H1Q8NG92 308 aa14.16□□□□□ -0.14
PTCH1-226ENST00000553011 CCDC110Q8TBZ0 833 aa14.16□□□□□ -0.14
PTCH1-226ENST00000553011 C1orf54Q8WWF1 131 aa14.16□□□□□ -0.14
PTCH1-226ENST00000553011 CENPTQ96BT3 561 aa14.16□□□□□ -0.14
PTCH1-226ENST00000553011 KLHDC7BQ96G42 594 aa14.16□□□□□ -0.14
PTCH1-226ENST00000553011 OXNAD1Q96HP4 312 aaPredicted RBP14.16□□□□□ -0.14
PTCH1-226ENST00000553011 SPATA13Q96N96 652 aa14.16□□□□□ -0.14
PTCH1-226ENST00000553011 FCRL5Q96RD9 977 aa14.16□□□□□ -0.14
PTCH1-226ENST00000553011 TRIB3Q96RU7 358 aa14.16□□□□□ -0.14
PTCH1-226ENST00000553011 FERMT1Q9BQL6 677 aa14.16□□□□□ -0.14
PTCH1-226ENST00000553011 GAREM1Q9H706 876 aa14.16□□□□□ -0.14
PTCH1-226ENST00000553011 MBNL1Q9NR56 388 aaKnown RBP14.16□□□□□ -0.14
PTCH1-226ENST00000553011 RSPH14Q9UHP6 348 aa14.16□□□□□ -0.14
PTCH1-226ENST00000553011 CDV3Q9UKY7 258 aaKnown RBP14.16□□□□□ -0.14
PTCH1-226ENST00000553011 HS3ST3A1Q9Y663 406 aa14.16□□□□□ -0.14
PTCH1-226ENST00000553011 CFAP69A5D8W1 941 aa14.15□□□□□ -0.14
PTCH1-226ENST00000553011 CAPN8A6NHC0 703 aa14.15□□□□□ -0.14
PTCH1-226ENST00000553011 LIASO43766 372 aa14.15□□□□□ -0.14
PTCH1-226ENST00000553011 RECQL5O94762 991 aaPredicted RBP14.15□□□□□ -0.14
PTCH1-226ENST00000553011 FGGP02679 453 aa14.15□□□□□ -0.14
PTCH1-226ENST00000553011 ATP1A1P05023 1023 aaKnown RBP14.15□□□□□ -0.14
PTCH1-226ENST00000553011 THEGLP0DJG4 465 aa14.15□□□□□ -0.14
PTCH1-226ENST00000553011 NFKBIAP25963 317 aa14.15□□□□□ -0.14
PTCH1-226ENST00000553011 LIMK1P53667 647 aa14.15□□□□□ -0.14
PTCH1-226ENST00000553011 GDF10P55107 478 aa14.15□□□□□ -0.14
PTCH1-226ENST00000553011 WNT3AP56704 352 aa14.15□□□□□ -0.14
PTCH1-226ENST00000553011 RPL26P61254 145 aaKnown RBP14.15□□□□□ -0.14
PTCH1-226ENST00000553011 CDK18Q07002 472 aa14.15□□□□□ -0.14
PTCH1-226ENST00000553011 ACOX1Q15067 660 aa14.15□□□□□ -0.14
PTCH1-226ENST00000553011 IRF4Q15306 451 aa14.15□□□□□ -0.14
PTCH1-226ENST00000553011 WSCD2Q2TBF2 565 aa14.15□□□□□ -0.14
PTCH1-226ENST00000553011 ANKRD20A2Q5SQ80 823 aa14.15□□□□□ -0.14
PTCH1-226ENST00000553011 ANKRD20A1Q5TYW2 823 aa14.15□□□□□ -0.14
PTCH1-226ENST00000553011 ANKRD20A3Q5VUR7 823 aa14.15□□□□□ -0.14
PTCH1-226ENST00000553011 CRTC1Q6UUV9 634 aa14.15□□□□□ -0.14
PTCH1-226ENST00000553011 KYAT3Q6YP21 454 aaKnown RBP14.15□□□□□ -0.14
PTCH1-226ENST00000553011 PTAR1Q7Z6K3 402 aaPredicted RBP14.15□□□□□ -0.14
PTCH1-226ENST00000553011 IQCHQ86VS3 1027 aa14.15□□□□□ -0.14
PTCH1-226ENST00000553011 SPATS2Q86XZ4 545 aaKnown RBP14.15□□□□□ -0.14
PTCH1-226ENST00000553011 NDUFAF2Q8N183 169 aa14.15□□□□□ -0.14
PTCH1-226ENST00000553011 FAM71DQ8N9W8 422 aa14.15□□□□□ -0.14
PTCH1-226ENST00000553011 SKA1Q96BD8 255 aa14.15□□□□□ -0.14
PTCH1-226ENST00000553011 RMDN1Q96DB5 314 aa14.15□□□□□ -0.14
PTCH1-226ENST00000553011 GORASP1Q9BQQ3 440 aa14.15□□□□□ -0.14
PTCH1-226ENST00000553011 TMEM121Q9BTD3 319 aa14.15□□□□□ -0.14
PTCH1-226ENST00000553011 C1QTNF7Q9BXJ2 289 aa14.15□□□□□ -0.14
PTCH1-226ENST00000553011 GBA3Q9H227 469 aa14.15□□□□□ -0.14
PTCH1-226ENST00000553011 FAM153AQ9UHL3 310 aa14.15□□□□□ -0.14
PTCH1-226ENST00000553011 RPL26L1Q9UNX3 145 aaKnown RBP14.15□□□□□ -0.14
PTCH1-226ENST00000553011 FNDC3AQ9Y2H6 1198 aaKnown RBP14.15□□□□□ -0.14
PTCH1-226ENST00000553011 MYLKQ15746 1914 aa14.15□□□□□ -0.14
PTCH1-226ENST00000553011 LRP4O75096 1905 aa14.14□□□□□ -0.15
PTCH1-226ENST00000553011 A6NNZ2 444 aa14.14□□□□□ -0.15
PTCH1-226ENST00000553011 ANKRD66B4E2M5 251 aa14.14□□□□□ -0.15
PTCH1-226ENST00000553011 FPGTO14772 594 aa14.14□□□□□ -0.15
PTCH1-226ENST00000553011 SLC30A4O14863 429 aa14.14□□□□□ -0.15
PTCH1-226ENST00000553011 OPHN1O60890 802 aa14.14□□□□□ -0.15
PTCH1-226ENST00000553011 STK10O94804 968 aaKnown RBP14.14□□□□□ -0.15
PTCH1-226ENST00000553011 CER1O95813 267 aa14.14□□□□□ -0.15
PTCH1-226ENST00000553011 PIRTP0C851 137 aa14.14□□□□□ -0.15
PTCH1-226ENST00000553011 PSMB4P28070 264 aa14.14□□□□□ -0.15
PTCH1-226ENST00000553011 OVGP1Q12889 678 aa14.14□□□□□ -0.15
PTCH1-226ENST00000553011 SNX1Q13596 522 aa14.14□□□□□ -0.15
PTCH1-226ENST00000553011 ARHGEF7Q14155 803 aa14.14□□□□□ -0.15
PTCH1-226ENST00000553011 LRRC14Q15048 493 aa14.14□□□□□ -0.15
PTCH1-226ENST00000553011 AGERQ15109 404 aa14.14□□□□□ -0.15
PTCH1-226ENST00000553011 OASLQ15646 514 aaKnown RBP14.14□□□□□ -0.15
PTCH1-226ENST00000553011 ZNF423Q2M1K9 1284 aa14.14□□□□□ -0.15
PTCH1-226ENST00000553011 TPRG1LQ5T0D9 272 aa14.14□□□□□ -0.15
PTCH1-226ENST00000553011 LRRC66Q68CR7 880 aa14.14□□□□□ -0.15
PTCH1-226ENST00000553011 ITPRIPL1Q6GPH6 555 aa14.14□□□□□ -0.15
PTCH1-226ENST00000553011 IL27RAQ6UWB1 636 aa14.14□□□□□ -0.15
PTCH1-226ENST00000553011 Q6ZSR6 202 aa14.14□□□□□ -0.15
PTCH1-226ENST00000553011 RFLNAQ6ZTI6 216 aa14.14□□□□□ -0.15
PTCH1-226ENST00000553011 HSD11B1LQ7Z5J1 315 aa14.14□□□□□ -0.15
PTCH1-226ENST00000553011 SLC22A18ASQ8N1D0 253 aa14.14□□□□□ -0.15
PTCH1-226ENST00000553011 C17orf53Q8N3J3 647 aaPredicted RBP14.14□□□□□ -0.15
PTCH1-226ENST00000553011 IFT43Q96FT9 208 aa14.14□□□□□ -0.15
PTCH1-226ENST00000553011 MRGPRX2Q96LB1 330 aa14.14□□□□□ -0.15
PTCH1-226ENST00000553011 COQ10AQ96MF6 247 aa14.14□□□□□ -0.15
PTCH1-226ENST00000553011 MLPHQ9BV36 600 aaPredicted RBP14.14□□□□□ -0.15
PTCH1-226ENST00000553011 ADGRE3Q9BY15 652 aa14.14□□□□□ -0.15
PTCH1-226ENST00000553011 CAAP1Q9H8G2 361 aa14.14□□□□□ -0.15
PTCH1-226ENST00000553011 GDF3Q9NR23 364 aa14.14□□□□□ -0.15
PTCH1-226ENST00000553011 DNAAF2Q9NVR5 837 aaKnown RBP14.14□□□□□ -0.15
PTCH1-226ENST00000553011 C5orf60A6NFR6 353 aa14.13□□□□□ -0.15
PTCH1-226ENST00000553011 CLDN7O95471 211 aa14.13□□□□□ -0.15
PTCH1-226ENST00000553011 NDST3O95803 873 aa14.13□□□□□ -0.15
PTCH1-226ENST00000553011 PCCBP05166 539 aa14.13□□□□□ -0.15
PTCH1-226ENST00000553011 C1SP09871 688 aa14.13□□□□□ -0.15
PTCH1-226ENST00000553011 MSNP26038 577 aaKnown RBP14.13□□□□□ -0.15
PTCH1-226ENST00000553011 ETV3P41162 512 aa14.13□□□□□ -0.15
PTCH1-226ENST00000553011 PFN3P60673 137 aa14.13□□□□□ -0.15
PTCH1-226ENST00000553011 IL9RQ01113 521 aa14.13□□□□□ -0.15
PTCH1-226ENST00000553011 PTSQ03393 145 aa14.13□□□□□ -0.15
PTCH1-226ENST00000553011 LONRF2Q1L5Z9 754 aa14.13□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms