RNA–Protein interactions for RNA: ENST00000552829.2

SUPT16H-202, Transcript of SPT16 homolog, facilitates chromatin remodeling subunit, humanhuman

TSL 2

Gene SUPT16H, Length 669 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT16H-202ENST00000552829 HOXC4P09017 264 aaPredicted RBP11.43□□□□□ -0.58
SUPT16H-202ENST00000552829 GPR3P46089 330 aa11.43□□□□□ -0.58
SUPT16H-202ENST00000552829 SUOXP51687 545 aa11.43□□□□□ -0.58
SUPT16H-202ENST00000552829 PMS1P54277 932 aaKnown RBP11.43□□□□□ -0.58
SUPT16H-202ENST00000552829 MAZP56270 477 aaKnown RBP11.43□□□□□ -0.58
SUPT16H-202ENST00000552829 KIAA1024LP59773 190 aa11.43□□□□□ -0.58
SUPT16H-202ENST00000552829 SNRPD1P62314 119 aaKnown RBP11.43□□□□□ -0.58
SUPT16H-202ENST00000552829 ABHD18Q0P651 414 aa11.43□□□□□ -0.58
SUPT16H-202ENST00000552829 PAK1Q13153 545 aa11.43□□□□□ -0.58
SUPT16H-202ENST00000552829 MTM1Q13496 603 aa11.43□□□□□ -0.58
SUPT16H-202ENST00000552829 SEPT6Q14141 434 aa11.43□□□□□ -0.58
SUPT16H-202ENST00000552829 TPD52L1Q16890 204 aaPredicted RBP11.43□□□□□ -0.58
SUPT16H-202ENST00000552829 COBLL1Q53SF7 1204 aa11.43□□□□□ -0.58
SUPT16H-202ENST00000552829 ATXN7L2Q5T6C5 722 aaPredicted RBP11.43□□□□□ -0.58
SUPT16H-202ENST00000552829 DCAF12Q5T6F0 453 aa11.43□□□□□ -0.58
SUPT16H-202ENST00000552829 ATP1A1-AS1Q5TC04 95 aa11.43□□□□□ -0.58
SUPT16H-202ENST00000552829 LRRC31Q6UY01 552 aa11.43□□□□□ -0.58
SUPT16H-202ENST00000552829 FAM183BPQ6ZVS7 135 aa11.43□□□□□ -0.58
SUPT16H-202ENST00000552829 HEATR4Q86WZ0 1026 aa11.43□□□□□ -0.58
SUPT16H-202ENST00000552829 NLGN4XQ8N0W4 816 aa11.43□□□□□ -0.58
SUPT16H-202ENST00000552829 EHBP1Q8NDI1 1231 aa11.43□□□□□ -0.58
SUPT16H-202ENST00000552829 NLGN4YQ8NFZ3 816 aaPredicted RBP11.43□□□□□ -0.58
SUPT16H-202ENST00000552829 KIAA1143Q96AT1 154 aaPredicted RBP11.43□□□□□ -0.58
SUPT16H-202ENST00000552829 RTP4Q96DX8 246 aa11.43□□□□□ -0.58
SUPT16H-202ENST00000552829 DPEP2Q9H4A9 486 aa11.43□□□□□ -0.58
SUPT16H-202ENST00000552829 ACP6Q9NPH0 428 aa11.43□□□□□ -0.58
SUPT16H-202ENST00000552829 SPATS2LQ9NUQ6 558 aaKnown RBP11.43□□□□□ -0.58
SUPT16H-202ENST00000552829 TMEM184BQ9Y519 407 aaPredicted RBP11.43□□□□□ -0.58
SUPT16H-202ENST00000552829 KCTD3Q9Y597 815 aa11.43□□□□□ -0.58
SUPT16H-202ENST00000552829 ZFHX3Q15911 3703 aa11.43□□□□□ -0.58
SUPT16H-202ENST00000552829 CELSR1Q9NYQ6 3014 aa11.42□□□□□ -0.58
SUPT16H-202ENST00000552829 TRIM49BA6NDI0 452 aa11.42□□□□□ -0.58
SUPT16H-202ENST00000552829 EFCAB7A8K855 629 aa11.42□□□□□ -0.58
SUPT16H-202ENST00000552829 P4HA2O15460 535 aa11.42□□□□□ -0.58
SUPT16H-202ENST00000552829 FGF1P05230 155 aa11.42□□□□□ -0.58
SUPT16H-202ENST00000552829 THRAP10827 490 aa11.42□□□□□ -0.58
SUPT16H-202ENST00000552829 ALDH4A1P30038 563 aa11.42□□□□□ -0.58
SUPT16H-202ENST00000552829 CSF2RBP32927 897 aa11.42□□□□□ -0.58
SUPT16H-202ENST00000552829 CSTF2P33240 577 aaKnown RBP eCLIP11.42□□□□□ -0.58
SUPT16H-202ENST00000552829 RAB15P59190 212 aa11.42□□□□□ -0.58
SUPT16H-202ENST00000552829 SLC6A3Q01959 620 aa11.42□□□□□ -0.58
SUPT16H-202ENST00000552829 STIM1Q13586 685 aa11.42□□□□□ -0.58
SUPT16H-202ENST00000552829 POLD3Q15054 466 aaPredicted RBP11.42□□□□□ -0.58
SUPT16H-202ENST00000552829 ANKS6Q68DC2 871 aa11.42□□□□□ -0.58
SUPT16H-202ENST00000552829 ASB18Q6ZVZ8 466 aa11.42□□□□□ -0.58
SUPT16H-202ENST00000552829 NRROSQ86YC3 692 aa11.42□□□□□ -0.58
SUPT16H-202ENST00000552829 CCDC13Q8IYE1 715 aa11.42□□□□□ -0.58
SUPT16H-202ENST00000552829 UNC5BQ8IZJ1 945 aa11.42□□□□□ -0.58
SUPT16H-202ENST00000552829 RYBPQ8N488 228 aaPredicted RBP11.42□□□□□ -0.58
SUPT16H-202ENST00000552829 PLA2G15Q8NCC3 412 aa11.42□□□□□ -0.58
SUPT16H-202ENST00000552829 OR56A4Q8NGH8 313 aa11.42□□□□□ -0.58
SUPT16H-202ENST00000552829 KIAA1524Q8TCG1 905 aa11.42□□□□□ -0.58
SUPT16H-202ENST00000552829 STARD8Q92502 1023 aa11.42□□□□□ -0.58
SUPT16H-202ENST00000552829 TEFMQ96QE5 360 aaKnown RBP11.42□□□□□ -0.58
SUPT16H-202ENST00000552829 MRPL40Q9NQ50 206 aaKnown RBP11.42□□□□□ -0.58
SUPT16H-202ENST00000552829 PPARGC1AQ9UBK2 798 aaKnown RBP11.42□□□□□ -0.58
SUPT16H-202ENST00000552829 ADGRG4Q8IZF6 3080 aa11.42□□□□□ -0.58
SUPT16H-202ENST00000552829 PDZD2O15018 2839 aa11.42□□□□□ -0.58
SUPT16H-202ENST00000552829 POLEQ07864 2286 aa11.41□□□□□ -0.58
SUPT16H-202ENST00000552829 IGHV1OR21-1A0A087WYE8 117 aa11.41□□□□□ -0.58
SUPT16H-202ENST00000552829 TSPAN11A1L157 253 aa11.41□□□□□ -0.58
SUPT16H-202ENST00000552829 RHPN2P1A8MT19 583 aa11.41□□□□□ -0.58
SUPT16H-202ENST00000552829 MKRN2OSH3BPM6 223 aa11.41□□□□□ -0.58
SUPT16H-202ENST00000552829 THAP12O43422 761 aa11.41□□□□□ -0.58
SUPT16H-202ENST00000552829 PDGFAP04085 211 aa11.41□□□□□ -0.58
SUPT16H-202ENST00000552829 ERBB2P04626 1255 aa11.41□□□□□ -0.58
SUPT16H-202ENST00000552829 KRT5P13647 590 aa11.41□□□□□ -0.58
SUPT16H-202ENST00000552829 TCN2P20062 427 aa11.41□□□□□ -0.58
SUPT16H-202ENST00000552829 ERCC5P28715 1186 aaPredicted RBP11.41□□□□□ -0.58
SUPT16H-202ENST00000552829 TRIM23P36406 574 aa11.41□□□□□ -0.58
SUPT16H-202ENST00000552829 ZNF75DP51815 510 aa11.41□□□□□ -0.58
SUPT16H-202ENST00000552829 GEMIN4P57678 1058 aaKnown RBP11.41□□□□□ -0.58
SUPT16H-202ENST00000552829 MC2RQ01718 297 aa11.41□□□□□ -0.58
SUPT16H-202ENST00000552829 ELP6Q0PNE2 266 aa11.41□□□□□ -0.58
SUPT16H-202ENST00000552829 C1QL3Q5VWW1 255 aa11.41□□□□□ -0.58
SUPT16H-202ENST00000552829 BNIPLQ7Z465 357 aa11.41□□□□□ -0.58
SUPT16H-202ENST00000552829 DRC7Q8IY82 874 aa11.41□□□□□ -0.58
SUPT16H-202ENST00000552829 ENOX1Q8TC92 643 aaKnown RBP11.41□□□□□ -0.58
SUPT16H-202ENST00000552829 CPT1CQ8TCG5 803 aa11.41□□□□□ -0.58
SUPT16H-202ENST00000552829 HCAR2Q8TDS4 363 aa11.41□□□□□ -0.58
SUPT16H-202ENST00000552829 DPYSL5Q9BPU6 564 aa11.41□□□□□ -0.58
SUPT16H-202ENST00000552829 TRIM5Q9C035 493 aa11.41□□□□□ -0.58
SUPT16H-202ENST00000552829 ZYG11BQ9C0D3 744 aa11.41□□□□□ -0.58
SUPT16H-202ENST00000552829 TTYH3Q9C0H2 523 aa11.41□□□□□ -0.58
SUPT16H-202ENST00000552829 HSD3B7Q9H2F3 369 aa11.41□□□□□ -0.58
SUPT16H-202ENST00000552829 ZNF768Q9H5H4 540 aaKnown RBP11.41□□□□□ -0.58
SUPT16H-202ENST00000552829 SAMSN1Q9NSI8 373 aaKnown RBP11.41□□□□□ -0.58
SUPT16H-202ENST00000552829 NDFIP2Q9NV92 336 aa11.41□□□□□ -0.58
SUPT16H-202ENST00000552829 FANCLQ9NW38 375 aa11.41□□□□□ -0.58
SUPT16H-202ENST00000552829 TMEM51Q9NW97 253 aa11.41□□□□□ -0.58
SUPT16H-202ENST00000552829 TMEM9Q9P0T7 183 aa11.41□□□□□ -0.58
SUPT16H-202ENST00000552829 MAP4K5Q9Y4K4 846 aa11.41□□□□□ -0.58
SUPT16H-202ENST00000552829 DIDO1Q9BTC0 2240 aaKnown RBP11.41□□□□□ -0.58
SUPT16H-202ENST00000552829 HIVEP1P15822 2718 aa11.41□□□□□ -0.58
SUPT16H-202ENST00000552829 AKAP9Q99996 3911 aa11.41□□□□□ -0.58
SUPT16H-202ENST00000552829 PSMA7O14818 248 aa11.4□□□□□ -0.58
SUPT16H-202ENST00000552829 PPM1DO15297 605 aa11.4□□□□□ -0.58
SUPT16H-202ENST00000552829 SRGAP2O75044 1071 aa11.4□□□□□ -0.58
SUPT16H-202ENST00000552829 DLGAP3O95886 979 aa11.4□□□□□ -0.58
SUPT16H-202ENST00000552829 F9P00740 461 aa11.4□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms