RNA–Protein interactions for RNA: ENST00000551845.5

PTCH1-225, Transcript of patched 1, humanhuman

TSL 5

Gene PTCH1, Length 809 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-225ENST00000551845 SUZ12Q15022 739 aaKnown RBP10.66□□□□□ -0.7
PTCH1-225ENST00000551845 ACOX1Q15067 660 aa10.66□□□□□ -0.7
PTCH1-225ENST00000551845 SLC14A2Q15849 920 aa10.66□□□□□ -0.7
PTCH1-225ENST00000551845 HLA-BQ31612 363 aa10.66□□□□□ -0.7
PTCH1-225ENST00000551845 ANKRD20A2Q5SQ80 823 aa10.66□□□□□ -0.7
PTCH1-225ENST00000551845 FAM182AQ5T1J6 154 aa10.66□□□□□ -0.7
PTCH1-225ENST00000551845 ANKRD20A1Q5TYW2 823 aa10.66□□□□□ -0.7
PTCH1-225ENST00000551845 ANKRD20A3Q5VUR7 823 aa10.66□□□□□ -0.7
PTCH1-225ENST00000551845 ITPRIPL1Q6GPH6 555 aa10.66□□□□□ -0.7
PTCH1-225ENST00000551845 LIPIQ6XZB0 460 aa10.66□□□□□ -0.7
PTCH1-225ENST00000551845 DCP2Q8IU60 420 aaKnown RBP10.66□□□□□ -0.7
PTCH1-225ENST00000551845 MINDY1Q8N5J2 469 aa10.66□□□□□ -0.7
PTCH1-225ENST00000551845 TMEM145Q8NBT3 493 aa10.66□□□□□ -0.7
PTCH1-225ENST00000551845 CENPTQ96BT3 561 aa10.66□□□□□ -0.7
PTCH1-225ENST00000551845 IFT43Q96FT9 208 aa10.66□□□□□ -0.7
PTCH1-225ENST00000551845 PBKQ96KB5 322 aa10.66□□□□□ -0.7
PTCH1-225ENST00000551845 MLPHQ9BV36 600 aaPredicted RBP10.66□□□□□ -0.7
PTCH1-225ENST00000551845 TMEM121BQ9BXQ6 578 aaPredicted RBP10.66□□□□□ -0.7
PTCH1-225ENST00000551845 GAREM1Q9H706 876 aa10.66□□□□□ -0.7
PTCH1-225ENST00000551845 USP29Q9HBJ7 922 aa10.66□□□□□ -0.7
PTCH1-225ENST00000551845 GDF3Q9NR23 364 aa10.66□□□□□ -0.7
PTCH1-225ENST00000551845 KCTD5Q9NXV2 234 aa10.66□□□□□ -0.7
PTCH1-225ENST00000551845 B4GALT6Q9UBX8 382 aa10.66□□□□□ -0.7
PTCH1-225ENST00000551845 FAM153AQ9UHL3 310 aa10.66□□□□□ -0.7
PTCH1-225ENST00000551845 RSPH14Q9UHP6 348 aa10.66□□□□□ -0.7
PTCH1-225ENST00000551845 DNPEPQ9ULA0 475 aa10.66□□□□□ -0.7
PTCH1-225ENST00000551845 SNX11Q9Y5W9 270 aa10.66□□□□□ -0.7
PTCH1-225ENST00000551845 A0A0J9YYE9 177 aa10.65□□□□□ -0.7
PTCH1-225ENST00000551845 TCRBV7S2A1N4TA0A589 114 aa10.65□□□□□ -0.7
PTCH1-225ENST00000551845 C5orf60A6NFR6 353 aa10.65□□□□□ -0.7
PTCH1-225ENST00000551845 TOR1BO14657 336 aa10.65□□□□□ -0.7
PTCH1-225ENST00000551845 PMPCBO75439 489 aa10.65□□□□□ -0.7
PTCH1-225ENST00000551845 RECQL5O94762 991 aaPredicted RBP10.65□□□□□ -0.7
PTCH1-225ENST00000551845 CER1O95813 267 aa10.65□□□□□ -0.7
PTCH1-225ENST00000551845 MT-CYBP00156 380 aaPredicted RBP10.65□□□□□ -0.7
PTCH1-225ENST00000551845 EPOP01588 193 aa10.65□□□□□ -0.7
PTCH1-225ENST00000551845 TRBC1P01850 177 aa10.65□□□□□ -0.7
PTCH1-225ENST00000551845 FGGP02679 453 aa10.65□□□□□ -0.7
PTCH1-225ENST00000551845 THEGLP0DJG4 465 aa10.65□□□□□ -0.7
PTCH1-225ENST00000551845 C6P13671 934 aa10.65□□□□□ -0.7
PTCH1-225ENST00000551845 NFKB1P19838 968 aa10.65□□□□□ -0.7
PTCH1-225ENST00000551845 VIPR1P32241 457 aa10.65□□□□□ -0.7
PTCH1-225ENST00000551845 CD68P34810 354 aaPredicted RBP10.65□□□□□ -0.7
PTCH1-225ENST00000551845 MMP12P39900 470 aa10.65□□□□□ -0.7
PTCH1-225ENST00000551845 CLDN2P57739 230 aa10.65□□□□□ -0.7
PTCH1-225ENST00000551845 SLC14A1Q13336 389 aa10.65□□□□□ -0.7
PTCH1-225ENST00000551845 MPP3Q13368 585 aa10.65□□□□□ -0.7
PTCH1-225ENST00000551845 IHHQ14623 411 aa10.65□□□□□ -0.7
PTCH1-225ENST00000551845 LRRC14Q15048 493 aa10.65□□□□□ -0.7
PTCH1-225ENST00000551845 AGERQ15109 404 aa10.65□□□□□ -0.7
PTCH1-225ENST00000551845 PCSK7Q16549 785 aa10.65□□□□□ -0.7
PTCH1-225ENST00000551845 LONRF2Q1L5Z9 754 aa10.65□□□□□ -0.7
PTCH1-225ENST00000551845 UAP1L1Q3KQV9 507 aa10.65□□□□□ -0.7
PTCH1-225ENST00000551845 DENND2CQ68D51 928 aa10.65□□□□□ -0.7
PTCH1-225ENST00000551845 Q6ZSR6 202 aa10.65□□□□□ -0.7
PTCH1-225ENST00000551845 KDELC2Q7Z4H8 507 aa10.65□□□□□ -0.7
PTCH1-225ENST00000551845 CBARPQ8N350 705 aaPredicted RBP10.65□□□□□ -0.7
PTCH1-225ENST00000551845 SLC35F6Q8N357 371 aa10.65□□□□□ -0.7
PTCH1-225ENST00000551845 DENND6BQ8NEG7 585 aa10.65□□□□□ -0.7
PTCH1-225ENST00000551845 LPCAT1Q8NF37 534 aa10.65□□□□□ -0.7
PTCH1-225ENST00000551845 SPATA22Q8NHS9 363 aa10.65□□□□□ -0.7
PTCH1-225ENST00000551845 SLC35B2Q8TB61 432 aa10.65□□□□□ -0.7
PTCH1-225ENST00000551845 GATA6Q92908 595 aa10.65□□□□□ -0.7
PTCH1-225ENST00000551845 BMFQ96LC9 184 aa10.65□□□□□ -0.7
PTCH1-225ENST00000551845 PPP1R2P1Q96PQ5 205 aa10.65□□□□□ -0.7
PTCH1-225ENST00000551845 MCCC1Q96RQ3 725 aaPredicted RBP10.65□□□□□ -0.7
PTCH1-225ENST00000551845 SRPK1Q96SB4 655 aaKnown RBP10.65□□□□□ -0.7
PTCH1-225ENST00000551845 KLF6Q99612 283 aaPredicted RBP10.65□□□□□ -0.7
PTCH1-225ENST00000551845 MYOCQ99972 504 aa10.65□□□□□ -0.7
PTCH1-225ENST00000551845 FZD3Q9NPG1 666 aa10.65□□□□□ -0.7
PTCH1-225ENST00000551845 HOMER3Q9NSC5 361 aa10.65□□□□□ -0.7
PTCH1-225ENST00000551845 UBP1Q9NZI7 540 aa10.65□□□□□ -0.7
PTCH1-225ENST00000551845 ZNF148Q9UQR1 794 aa10.65□□□□□ -0.7
PTCH1-225ENST00000551845 CA5BQ9Y2D0 317 aa10.65□□□□□ -0.7
PTCH1-225ENST00000551845 AAR2Q9Y312 384 aaKnown RBP10.65□□□□□ -0.7
PTCH1-225ENST00000551845 SPAG17Q6Q759 2223 aa10.65□□□□□ -0.71
PTCH1-225ENST00000551845 POM121BA6NF01 834 aa10.64□□□□□ -0.71
PTCH1-225ENST00000551845 A6NNZ2 444 aa10.64□□□□□ -0.71
PTCH1-225ENST00000551845 PSMD11O00231 422 aa10.64□□□□□ -0.71
PTCH1-225ENST00000551845 RAD51BO15315 384 aa10.64□□□□□ -0.71
PTCH1-225ENST00000551845 GCATO75600 419 aa10.64□□□□□ -0.71
PTCH1-225ENST00000551845 ANXA9O76027 345 aa10.64□□□□□ -0.71
PTCH1-225ENST00000551845 HEXIM1O94992 359 aaKnown RBP10.64□□□□□ -0.71
PTCH1-225ENST00000551845 ALPIP09923 528 aa10.64□□□□□ -0.71
PTCH1-225ENST00000551845 CEACAM1P13688 526 aa10.64□□□□□ -0.71
PTCH1-225ENST00000551845 ZNF30P17039 623 aa10.64□□□□□ -0.71
PTCH1-225ENST00000551845 CXCR5P32302 372 aa10.64□□□□□ -0.71
PTCH1-225ENST00000551845 ACTN2P35609 894 aa10.64□□□□□ -0.71
PTCH1-225ENST00000551845 CTSKP43235 329 aa10.64□□□□□ -0.71
PTCH1-225ENST00000551845 RABIFP47224 123 aa10.64□□□□□ -0.71
PTCH1-225ENST00000551845 ARRB1P49407 418 aaPredicted RBP10.64□□□□□ -0.71
PTCH1-225ENST00000551845 GEMP55040 296 aa10.64□□□□□ -0.71
PTCH1-225ENST00000551845 NXPH1P58417 271 aa10.64□□□□□ -0.71
PTCH1-225ENST00000551845 YPEL5P62699 121 aa10.64□□□□□ -0.71
PTCH1-225ENST00000551845 BNC1Q01954 994 aa10.64□□□□□ -0.71
PTCH1-225ENST00000551845 PTSQ03393 145 aa10.64□□□□□ -0.71
PTCH1-225ENST00000551845 RALGDSQ12967 914 aa10.64□□□□□ -0.71
PTCH1-225ENST00000551845 PTK2BQ14289 1009 aa10.64□□□□□ -0.71
PTCH1-225ENST00000551845 CCNG2Q16589 344 aa10.64□□□□□ -0.71
PTCH1-225ENST00000551845 QPCTQ16769 361 aa10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms