RNA–Protein interactions for RNA: ENST00000550592.1

LIMA1-205, Transcript of LIM domain and actin binding 1, humanhuman

TSL 4

Gene LIMA1, Length 567 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMA1-205ENST00000550592 WDTC1Q8N5D0 677 aa5.08□□□□□ -1.6
LIMA1-205ENST00000550592 ENGASEQ8NFI3 743 aa5.08□□□□□ -1.6
LIMA1-205ENST00000550592 TMEM163Q8TC26 289 aa5.08□□□□□ -1.6
LIMA1-205ENST00000550592 POMGNT1Q8WZA1 660 aa5.08□□□□□ -1.6
LIMA1-205ENST00000550592 TMEM18Q96B42 140 aa5.08□□□□□ -1.6
LIMA1-205ENST00000550592 PABPC5Q96DU9 382 aaKnown RBP5.08□□□□□ -1.6
LIMA1-205ENST00000550592 WDFY2Q96P53 400 aa5.08□□□□□ -1.6
LIMA1-205ENST00000550592 SIN3AQ96ST3 1273 aa5.08□□□□□ -1.6
LIMA1-205ENST00000550592 MXRA8Q9BRK3 442 aa5.08□□□□□ -1.6
LIMA1-205ENST00000550592 SLITRK6Q9H5Y7 841 aa5.08□□□□□ -1.6
LIMA1-205ENST00000550592 FZD3Q9NPG1 666 aa5.08□□□□□ -1.6
LIMA1-205ENST00000550592 SMYD2Q9NRG4 433 aa5.08□□□□□ -1.6
LIMA1-205ENST00000550592 SLC6A13Q9NSD5 602 aa5.08□□□□□ -1.6
LIMA1-205ENST00000550592 DLGAP2Q9P1A6 1054 aa5.08□□□□□ -1.6
LIMA1-205ENST00000550592 ABI3Q9P2A4 366 aa5.08□□□□□ -1.6
LIMA1-205ENST00000550592 HEY2Q9UBP5 337 aa5.08□□□□□ -1.6
LIMA1-205ENST00000550592 COG5Q9UP83 839 aa5.08□□□□□ -1.6
LIMA1-205ENST00000550592 LSM4Q9Y4Z0 139 aaKnown RBP5.08□□□□□ -1.6
LIMA1-205ENST00000550592 A3GALT2U3KPV4 340 aa5.08□□□□□ -1.6
LIMA1-205ENST00000550592 EP400Q96L91 3159 aa5.08□□□□□ -1.6
LIMA1-205ENST00000550592 TIAM1Q13009 1591 aa5.08□□□□□ -1.6
LIMA1-205ENST00000550592 NCOA3Q9Y6Q9 1424 aa5.07□□□□□ -1.6
LIMA1-205ENST00000550592 CEP350Q5VT06 3117 aa5.07□□□□□ -1.6
LIMA1-205ENST00000550592 AGAP14A8MT82 685 aa5.07□□□□□ -1.6
LIMA1-205ENST00000550592 MYO1GB0I1T2 1018 aa5.07□□□□□ -1.6
LIMA1-205ENST00000550592 SNAP23O00161 211 aa5.07□□□□□ -1.6
LIMA1-205ENST00000550592 VILLO15195 856 aa5.07□□□□□ -1.6
LIMA1-205ENST00000550592 EPN2O95208 641 aa5.07□□□□□ -1.6
LIMA1-205ENST00000550592 FGBP02675 491 aa5.07□□□□□ -1.6
LIMA1-205ENST00000550592 CHRNB2P17787 502 aa5.07□□□□□ -1.6
LIMA1-205ENST00000550592 ITGAXP20702 1163 aa5.07□□□□□ -1.6
LIMA1-205ENST00000550592 SHMT1P34896 483 aa5.07□□□□□ -1.6
LIMA1-205ENST00000550592 PSMB10P40306 273 aa5.07□□□□□ -1.6
LIMA1-205ENST00000550592 PPP3CCP48454 512 aa5.07□□□□□ -1.6
LIMA1-205ENST00000550592 ALDH7A1P49419 539 aaKnown RBP5.07□□□□□ -1.6
LIMA1-205ENST00000550592 CDH12P55289 794 aa5.07□□□□□ -1.6
LIMA1-205ENST00000550592 TMPRSS3P57727 454 aa5.07□□□□□ -1.6
LIMA1-205ENST00000550592 PRAMEP78395 509 aa5.07□□□□□ -1.6
LIMA1-205ENST00000550592 CREB5Q02930 508 aa5.07□□□□□ -1.6
LIMA1-205ENST00000550592 CEBPZQ03701 1054 aaKnown RBP5.07□□□□□ -1.6
LIMA1-205ENST00000550592 ACVR2BQ13705 512 aa5.07□□□□□ -1.6
LIMA1-205ENST00000550592 CAPSQ13938 189 aa5.07□□□□□ -1.6
LIMA1-205ENST00000550592 KCTD2Q14681 263 aa5.07□□□□□ -1.6
LIMA1-205ENST00000550592 CRYMQ14894 314 aa5.07□□□□□ -1.6
LIMA1-205ENST00000550592 EZH2Q15910 746 aaKnown RBP5.07□□□□□ -1.6
LIMA1-205ENST00000550592 DUSP6Q16828 381 aa5.07□□□□□ -1.6
LIMA1-205ENST00000550592 SOWAHAQ2M3V2 549 aa5.07□□□□□ -1.6
LIMA1-205ENST00000550592 TCTN1Q2MV58 587 aa5.07□□□□□ -1.6
LIMA1-205ENST00000550592 DUSP28Q4G0W2 176 aa5.07□□□□□ -1.6
LIMA1-205ENST00000550592 ESCO2Q56NI9 601 aa5.07□□□□□ -1.6
LIMA1-205ENST00000550592 PRAMEF19Q5SWL8 479 aa5.07□□□□□ -1.6
LIMA1-205ENST00000550592 LRRC8EQ6NSJ5 796 aa5.07□□□□□ -1.6
LIMA1-205ENST00000550592 CES5AQ6NT32 575 aa5.07□□□□□ -1.6
LIMA1-205ENST00000550592 KLHL35Q6PF15 583 aa5.07□□□□□ -1.6
LIMA1-205ENST00000550592 SARM1Q6SZW1 724 aa5.07□□□□□ -1.6
LIMA1-205ENST00000550592 SLC16A12Q6ZSM3 486 aa5.07□□□□□ -1.6
LIMA1-205ENST00000550592 TRILQ7L0X0 811 aa5.07□□□□□ -1.6
LIMA1-205ENST00000550592 TDRPQ86YL5 185 aa5.07□□□□□ -1.6
LIMA1-205ENST00000550592 ZCCHC9Q8N567 271 aaKnown RBP5.07□□□□□ -1.6
LIMA1-205ENST00000550592 CCDC89Q8N998 374 aa5.07□□□□□ -1.6
LIMA1-205ENST00000550592 MMABQ96EY8 250 aaPredicted RBP5.07□□□□□ -1.6
LIMA1-205ENST00000550592 ZC3HAV1LQ96H79 300 aaKnown RBP5.07□□□□□ -1.6
LIMA1-205ENST00000550592 CRAMP1Q96RY5 1269 aa5.07□□□□□ -1.6
LIMA1-205ENST00000550592 MSTO1Q9BUK6 570 aa5.07□□□□□ -1.6
LIMA1-205ENST00000550592 KRTAP4-11Q9BYQ6 195 aa5.07□□□□□ -1.6
LIMA1-205ENST00000550592 NPFFR1Q9GZQ6 430 aa5.07□□□□□ -1.6
LIMA1-205ENST00000550592 LHPPQ9H008 270 aa5.07□□□□□ -1.6
LIMA1-205ENST00000550592 DECR2Q9NUI1 292 aa5.07□□□□□ -1.6
LIMA1-205ENST00000550592 PLK2Q9NYY3 685 aa5.07□□□□□ -1.6
LIMA1-205ENST00000550592 RAI2Q9Y5P3 530 aa5.07□□□□□ -1.6
LIMA1-205ENST00000550592 NKTRP30414 1462 aaKnown RBP5.07□□□□□ -1.6
LIMA1-205ENST00000550592 RALGAPBQ86X10 1494 aa5.07□□□□□ -1.6
LIMA1-205ENST00000550592 ARHGAP23Q9P227 1491 aa5.07□□□□□ -1.6
LIMA1-205ENST00000550592 PNPLA6Q8IY17 1366 aa5.06□□□□□ -1.6
LIMA1-205ENST00000550592 FAM237AA0A1B0GTK4 181 aa5.06□□□□□ -1.6
LIMA1-205ENST00000550592 FRMD3A2A2Y4 597 aa5.06□□□□□ -1.6
LIMA1-205ENST00000550592 ATP2C2O75185 946 aa5.06□□□□□ -1.6
LIMA1-205ENST00000550592 NDUFB8O95169 186 aa5.06□□□□□ -1.6
LIMA1-205ENST00000550592 OR2C1O95371 312 aa5.06□□□□□ -1.6
LIMA1-205ENST00000550592 IPO7O95373 1038 aaKnown RBP5.06□□□□□ -1.6
LIMA1-205ENST00000550592 CENPBP07199 599 aaPredicted RBP5.06□□□□□ -1.6
LIMA1-205ENST00000550592 HSP90AA1P07900 732 aaKnown RBP5.06□□□□□ -1.6
LIMA1-205ENST00000550592 FGF2P09038 288 aa5.06□□□□□ -1.6
LIMA1-205ENST00000550592 ETFAP13804 333 aa5.06□□□□□ -1.6
LIMA1-205ENST00000550592 PPARGP37231 505 aaPredicted RBP5.06□□□□□ -1.6
LIMA1-205ENST00000550592 UBA7P41226 1012 aa5.06□□□□□ -1.6
LIMA1-205ENST00000550592 NANOS3P60323 173 aaKnown RBP5.06□□□□□ -1.6
LIMA1-205ENST00000550592 RBMS2Q15434 407 aaKnown RBP5.06□□□□□ -1.6
LIMA1-205ENST00000550592 SGO1Q5FBB7 561 aa5.06□□□□□ -1.6
LIMA1-205ENST00000550592 SHC4Q6S5L8 630 aa5.06□□□□□ -1.6
LIMA1-205ENST00000550592 PARM1Q6UWI2 310 aa5.06□□□□□ -1.6
LIMA1-205ENST00000550592 NOXA1Q86UR1 476 aa5.06□□□□□ -1.6
LIMA1-205ENST00000550592 ARFGAP1Q8N6T3 406 aa5.06□□□□□ -1.6
LIMA1-205ENST00000550592 SLC35F5Q8WV83 523 aa5.06□□□□□ -1.6
LIMA1-205ENST00000550592 FBXL8Q96CD0 374 aa5.06□□□□□ -1.6
LIMA1-205ENST00000550592 CMTM3Q96MX0 182 aa5.06□□□□□ -1.6
LIMA1-205ENST00000550592 SLITRK1Q96PX8 696 aa5.06□□□□□ -1.6
LIMA1-205ENST00000550592 NUDT16L1Q9BRJ7 211 aaKnown RBP5.06□□□□□ -1.6
LIMA1-205ENST00000550592 TMEM79Q9BSE2 394 aa5.06□□□□□ -1.6
LIMA1-205ENST00000550592 KAT14Q9H8E8 782 aa5.06□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms