RNA–Protein interactions for RNA: ENST00000550552.5

TMEM106C-215, Transcript of transmembrane protein 106C, humanhuman

TSL 1 (best) BASIC

Gene TMEM106C, Length 776 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM106C-215ENST00000550552 SYCE1Q8N0S2 351 aa6.51□□□□□ -1.37
TMEM106C-215ENST00000550552 CCDC112Q8NEF3 446 aa6.51□□□□□ -1.37
TMEM106C-215ENST00000550552 SPATA22Q8NHS9 363 aa6.51□□□□□ -1.37
TMEM106C-215ENST00000550552 BAHD1Q8TBE0 780 aaPredicted RBP6.51□□□□□ -1.37
TMEM106C-215ENST00000550552 ACTL9Q8TC94 416 aa6.51□□□□□ -1.37
TMEM106C-215ENST00000550552 RHBDD1Q8TEB9 315 aa6.51□□□□□ -1.37
TMEM106C-215ENST00000550552 TFB1MQ8WVM0 346 aaKnown RBP6.51□□□□□ -1.37
TMEM106C-215ENST00000550552 EID2BQ96D98 161 aa6.51□□□□□ -1.37
TMEM106C-215ENST00000550552 IMP4Q96G21 291 aaKnown RBP6.51□□□□□ -1.37
TMEM106C-215ENST00000550552 COQ10AQ96MF6 247 aa6.51□□□□□ -1.37
TMEM106C-215ENST00000550552 ZNF830Q96NB3 372 aaPredicted RBP6.51□□□□□ -1.37
TMEM106C-215ENST00000550552 TRIB3Q96RU7 358 aa6.51□□□□□ -1.37
TMEM106C-215ENST00000550552 RBM15Q96T37 977 aaKnown RBP eCLIP6.51□□□□□ -1.37
TMEM106C-215ENST00000550552 TDRD1Q9BXT4 1180 aaKnown RBP6.51□□□□□ -1.37
TMEM106C-215ENST00000550552 KCNF1Q9H3M0 494 aa6.51□□□□□ -1.37
TMEM106C-215ENST00000550552 USP29Q9HBJ7 922 aa6.51□□□□□ -1.37
TMEM106C-215ENST00000550552 GLOD4Q9HC38 313 aa6.51□□□□□ -1.37
TMEM106C-215ENST00000550552 LZTFL1Q9NQ48 299 aa6.51□□□□□ -1.37
TMEM106C-215ENST00000550552 GDF3Q9NR23 364 aa6.51□□□□□ -1.37
TMEM106C-215ENST00000550552 UCKL1Q9NWZ5 548 aa6.51□□□□□ -1.37
TMEM106C-215ENST00000550552 PCOLCE2Q9UKZ9 415 aa6.51□□□□□ -1.37
TMEM106C-215ENST00000550552 PHTF1Q9UMS5 762 aa6.51□□□□□ -1.37
TMEM106C-215ENST00000550552 PPP2R2CQ9Y2T4 447 aa6.51□□□□□ -1.37
TMEM106C-215ENST00000550552 TTLL3Q9Y4R7 772 aa6.51□□□□□ -1.37
TMEM106C-215ENST00000550552 PCDHGB2Q9Y5G2 931 aa6.51□□□□□ -1.37
TMEM106C-215ENST00000550552 ASCC3Q8N3C0 2202 aaKnown RBP6.51□□□□□ -1.37
TMEM106C-215ENST00000550552 ADAMTS9Q9P2N4 1935 aa6.5□□□□□ -1.37
TMEM106C-215ENST00000550552 ASPMQ8IZT6 3477 aa6.5□□□□□ -1.37
TMEM106C-215ENST00000550552 DOCK9Q9BZ29 2069 aa6.5□□□□□ -1.37
TMEM106C-215ENST00000550552 PLXNA2O75051 1894 aa6.5□□□□□ -1.37
TMEM106C-215ENST00000550552 A0A0J9YYE9 177 aa6.5□□□□□ -1.37
TMEM106C-215ENST00000550552 SPAARA0A1B0GVQ0 90 aa6.5□□□□□ -1.37
TMEM106C-215ENST00000550552 A0A1W2PQ67 120 aa6.5□□□□□ -1.37
TMEM106C-215ENST00000550552 HACD1B0YJ81 288 aa6.5□□□□□ -1.37
TMEM106C-215ENST00000550552 ANKRD66B4E2M5 251 aa6.5□□□□□ -1.37
TMEM106C-215ENST00000550552 PPP1R12AO14974 1030 aaPredicted RBP6.5□□□□□ -1.37
TMEM106C-215ENST00000550552 KRT86O43790 486 aa6.5□□□□□ -1.37
TMEM106C-215ENST00000550552 LZTS3O60299 673 aaPredicted RBP6.5□□□□□ -1.37
TMEM106C-215ENST00000550552 MAGEC1O60732 1142 aa6.5□□□□□ -1.37
TMEM106C-215ENST00000550552 SDC3O75056 442 aa6.5□□□□□ -1.37
TMEM106C-215ENST00000550552 NEBLO76041 1014 aa6.5□□□□□ -1.37
TMEM106C-215ENST00000550552 HEXIM1O94992 359 aaKnown RBP6.5□□□□□ -1.37
TMEM106C-215ENST00000550552 CLDN7O95471 211 aa6.5□□□□□ -1.37
TMEM106C-215ENST00000550552 MT-CYBP00156 380 aaPredicted RBP6.5□□□□□ -1.37
TMEM106C-215ENST00000550552 TRBC1P01850 177 aa6.5□□□□□ -1.37
TMEM106C-215ENST00000550552 CCDC175P0C221 793 aa6.5□□□□□ -1.37
TMEM106C-215ENST00000550552 ELFN1P0C7U0 828 aa6.5□□□□□ -1.37
TMEM106C-215ENST00000550552 GIMD1P0DJR0 217 aa6.5□□□□□ -1.37
TMEM106C-215ENST00000550552 RBL1P28749 1068 aa6.5□□□□□ -1.37
TMEM106C-215ENST00000550552 VIPR1P32241 457 aa6.5□□□□□ -1.37
TMEM106C-215ENST00000550552 TRIM23P36406 574 aa6.5□□□□□ -1.37
TMEM106C-215ENST00000550552 ETV3P41162 512 aa6.5□□□□□ -1.37
TMEM106C-215ENST00000550552 RABIFP47224 123 aa6.5□□□□□ -1.37
TMEM106C-215ENST00000550552 CCT8P50990 548 aa6.5□□□□□ -1.37
TMEM106C-215ENST00000550552 OTUD4Q01804 1114 aaKnown RBP6.5□□□□□ -1.37
TMEM106C-215ENST00000550552 EIF2B5Q13144 721 aaKnown RBP6.5□□□□□ -1.37
TMEM106C-215ENST00000550552 KLF1Q13351 362 aaPredicted RBP6.5□□□□□ -1.37
TMEM106C-215ENST00000550552 XRCC4Q13426 336 aa6.5□□□□□ -1.37
TMEM106C-215ENST00000550552 PDE1CQ14123 709 aaPredicted RBP6.5□□□□□ -1.37
TMEM106C-215ENST00000550552 ACOX1Q15067 660 aa6.5□□□□□ -1.37
TMEM106C-215ENST00000550552 TRIP6Q15654 476 aaKnown RBP6.5□□□□□ -1.37
TMEM106C-215ENST00000550552 QPCTQ16769 361 aa6.5□□□□□ -1.37
TMEM106C-215ENST00000550552 MEI1Q5TIA1 1274 aa6.5□□□□□ -1.37
TMEM106C-215ENST00000550552 DENND2CQ68D51 928 aa6.5□□□□□ -1.37
TMEM106C-215ENST00000550552 KYAT3Q6YP21 454 aaKnown RBP6.5□□□□□ -1.37
TMEM106C-215ENST00000550552 Q6ZVL8 140 aa6.5□□□□□ -1.37
TMEM106C-215ENST00000550552 HSD11B1LQ7Z5J1 315 aa6.5□□□□□ -1.37
TMEM106C-215ENST00000550552 PTAR1Q7Z6K3 402 aaPredicted RBP6.5□□□□□ -1.37
TMEM106C-215ENST00000550552 TECPR1Q7Z6L1 1165 aa6.5□□□□□ -1.37
TMEM106C-215ENST00000550552 SLCO6A1Q86UG4 719 aa6.5□□□□□ -1.37
TMEM106C-215ENST00000550552 DCP2Q8IU60 420 aaKnown RBP6.5□□□□□ -1.37
TMEM106C-215ENST00000550552 REXO1L1PQ8IX06 675 aa6.5□□□□□ -1.37
TMEM106C-215ENST00000550552 ZNF567Q8N184 647 aa6.5□□□□□ -1.37
TMEM106C-215ENST00000550552 TXLNBQ8N3L3 684 aa6.5□□□□□ -1.37
TMEM106C-215ENST00000550552 UBL4BQ8N7F7 174 aa6.5□□□□□ -1.37
TMEM106C-215ENST00000550552 PAF1Q8N7H5 531 aa6.5□□□□□ -1.37
TMEM106C-215ENST00000550552 DENND6BQ8NEG7 585 aa6.5□□□□□ -1.37
TMEM106C-215ENST00000550552 FAM174AQ8TBP5 190 aa6.5□□□□□ -1.37
TMEM106C-215ENST00000550552 SETD7Q8WTS6 366 aaKnown RBP6.5□□□□□ -1.37
TMEM106C-215ENST00000550552 HTR3CQ8WXA8 447 aa6.5□□□□□ -1.37
TMEM106C-215ENST00000550552 OXNAD1Q96HP4 312 aaPredicted RBP6.5□□□□□ -1.37
TMEM106C-215ENST00000550552 QKIQ96PU8 341 aaKnown RBP eCLIP6.5□□□□□ -1.37
TMEM106C-215ENST00000550552 GORASP1Q9BQQ3 440 aa6.5□□□□□ -1.37
TMEM106C-215ENST00000550552 APOOQ9BUR5 198 aa6.5□□□□□ -1.37
TMEM106C-215ENST00000550552 LGR4Q9BXB1 951 aa6.5□□□□□ -1.37
TMEM106C-215ENST00000550552 TSGA10Q9BZW7 698 aa6.5□□□□□ -1.37
TMEM106C-215ENST00000550552 SLC25A51Q9H1U9 297 aa6.5□□□□□ -1.37
TMEM106C-215ENST00000550552 TCEAL2Q9H3H9 227 aaPredicted RBP6.5□□□□□ -1.37
TMEM106C-215ENST00000550552 PCDH9Q9HC56 1237 aa6.5□□□□□ -1.37
TMEM106C-215ENST00000550552 UBP1Q9NZI7 540 aa6.5□□□□□ -1.37
TMEM106C-215ENST00000550552 WASF3Q9UPY6 502 aa6.5□□□□□ -1.37
TMEM106C-215ENST00000550552 R3HDM2Q9Y2K5 976 aaKnown RBP6.5□□□□□ -1.37
TMEM106C-215ENST00000550552 OR1A2Q9Y585 309 aa6.5□□□□□ -1.37
TMEM106C-215ENST00000550552 BPTFQ12830 3046 aa6.5□□□□□ -1.37
TMEM106C-215ENST00000550552 CABIN1Q9Y6J0 2220 aa6.49□□□□□ -1.37
TMEM106C-215ENST00000550552 CHD8Q9HCK8 2581 aa6.49□□□□□ -1.37
TMEM106C-215ENST00000550552 LOC285095A0A1B0GVY8 99 aa6.49□□□□□ -1.37
TMEM106C-215ENST00000550552 TMEM202A6NGA9 273 aa6.49□□□□□ -1.37
TMEM106C-215ENST00000550552 F5H423 210 aaPredicted RBP6.49□□□□□ -1.37
TMEM106C-215ENST00000550552 H7C0C1 242 aa6.49□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms