RNA–Protein interactions for RNA: ENST00000550418.5

RBFOX1-212, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 1 (best) BASIC

Gene RBFOX1, Length 4,775 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-212ENST00000550418 CRISPLD1Q9H336 500 aa15.84■□□□□ 0.13
RBFOX1-212ENST00000550418 SSR3Q9UNL2 185 aa15.84■□□□□ 0.13
RBFOX1-212ENST00000550418 WNT10BO00744 389 aa15.84■□□□□ 0.13
RBFOX1-212ENST00000550418 BCKDKO14874 412 aa15.84■□□□□ 0.13
RBFOX1-212ENST00000550418 RGL2O15211 777 aa15.84■□□□□ 0.13
RBFOX1-212ENST00000550418 SEMA3DO95025 777 aa15.84■□□□□ 0.13
RBFOX1-212ENST00000550418 S100A9P06702 114 aaKnown RBP15.84■□□□□ 0.13
RBFOX1-212ENST00000550418 OR1E1P30953 314 aa15.84■□□□□ 0.13
RBFOX1-212ENST00000550418 GTF2A2P52657 109 aa15.84■□□□□ 0.13
RBFOX1-212ENST00000550418 LIPEQ05469 1076 aa15.84■□□□□ 0.13
RBFOX1-212ENST00000550418 ENPEPQ07075 957 aa15.84■□□□□ 0.13
RBFOX1-212ENST00000550418 BNIP3Q12983 259 aa15.84■□□□□ 0.13
RBFOX1-212ENST00000550418 CAMK2GQ13555 558 aaPredicted RBP15.84■□□□□ 0.13
RBFOX1-212ENST00000550418 OGFOD2Q6N063 350 aa15.84■□□□□ 0.13
RBFOX1-212ENST00000550418 TRAPPC12Q8WVT3 735 aa15.84■□□□□ 0.13
RBFOX1-212ENST00000550418 PPM1MQ96MI6 270 aa15.84■□□□□ 0.13
RBFOX1-212ENST00000550418 IDI2Q9BXS1 227 aa15.84■□□□□ 0.13
RBFOX1-212ENST00000550418 FAM126AQ9BYI3 521 aaPredicted RBP15.84■□□□□ 0.13
RBFOX1-212ENST00000550418 C1orf21Q9H246 121 aa15.84■□□□□ 0.13
RBFOX1-212ENST00000550418 POLE3Q9NRF9 147 aa15.84■□□□□ 0.13
RBFOX1-212ENST00000550418 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP15.84■□□□□ 0.13
RBFOX1-212ENST00000550418 FAM198AQ9UFP1 575 aa15.84■□□□□ 0.13
RBFOX1-212ENST00000550418 GNPTGQ9UJJ9 305 aa15.84■□□□□ 0.13
RBFOX1-212ENST00000550418 PSMD11O00231 422 aa15.84■□□□□ 0.13
RBFOX1-212ENST00000550418 IFRD1O00458 451 aaPredicted RBP15.84■□□□□ 0.13
RBFOX1-212ENST00000550418 TOR1BO14657 336 aa15.84■□□□□ 0.13
RBFOX1-212ENST00000550418 BUD23O43709 281 aaKnown RBP15.84■□□□□ 0.13
RBFOX1-212ENST00000550418 STX4Q12846 297 aa15.84■□□□□ 0.13
RBFOX1-212ENST00000550418 IL18R1Q13478 541 aa15.84■□□□□ 0.13
RBFOX1-212ENST00000550418 SFT2D3Q587I9 215 aa15.84■□□□□ 0.13
RBFOX1-212ENST00000550418 PPM1LQ5SGD2 360 aa15.84■□□□□ 0.13
RBFOX1-212ENST00000550418 ANKRD23Q86SG2 305 aa15.84■□□□□ 0.13
RBFOX1-212ENST00000550418 AP3S1Q92572 193 aa15.84■□□□□ 0.13
RBFOX1-212ENST00000550418 ZFP42Q96MM3 310 aa15.84■□□□□ 0.13
RBFOX1-212ENST00000550418 CD320Q9NPF0 282 aa15.84■□□□□ 0.13
RBFOX1-212ENST00000550418 CLCA2Q9UQC9 943 aa15.84■□□□□ 0.13
RBFOX1-212ENST00000550418 TMEM63AO94886 807 aa15.83■□□□□ 0.13
RBFOX1-212ENST00000550418 FTH1P02794 183 aa15.83■□□□□ 0.13
RBFOX1-212ENST00000550418 ERBB2P04626 1255 aa15.83■□□□□ 0.13
RBFOX1-212ENST00000550418 USP17L7P0C7H9 530 aa15.83■□□□□ 0.13
RBFOX1-212ENST00000550418 SLC7A1P30825 629 aa15.83■□□□□ 0.13
RBFOX1-212ENST00000550418 THOP1P52888 689 aa15.83■□□□□ 0.13
RBFOX1-212ENST00000550418 SHROOM1Q2M3G4 852 aaPredicted RBP15.83■□□□□ 0.13
RBFOX1-212ENST00000550418 C16orf62Q7Z3J2 963 aa15.83■□□□□ 0.13
RBFOX1-212ENST00000550418 FBXO16Q8IX29 292 aaPredicted RBP15.83■□□□□ 0.13
RBFOX1-212ENST00000550418 SLC4A11Q8NBS3 891 aa15.83■□□□□ 0.13
RBFOX1-212ENST00000550418 NXNL1Q96CM4 212 aa15.83■□□□□ 0.13
RBFOX1-212ENST00000550418 SMARCD1Q96GM5 515 aa15.83■□□□□ 0.13
RBFOX1-212ENST00000550418 POLR1EQ9GZS1 481 aaKnown RBP15.83■□□□□ 0.13
RBFOX1-212ENST00000550418 RASSF1Q9NS23 344 aa15.83■□□□□ 0.13
RBFOX1-212ENST00000550418 CCDC59Q9P031 241 aaKnown RBP15.83■□□□□ 0.13
RBFOX1-212ENST00000550418 MRPL42Q9Y6G3 142 aaKnown RBP15.83■□□□□ 0.13
RBFOX1-212ENST00000550418 PMF1-BGLAPU3KQ54 211 aa15.83■□□□□ 0.13
RBFOX1-212ENST00000550418 DISP2A7MBM2 1401 aa15.83■□□□□ 0.13
RBFOX1-212ENST00000550418 CLTBP09497 229 aa15.83■□□□□ 0.12
RBFOX1-212ENST00000550418 TBX4P57082 545 aa15.83■□□□□ 0.12
RBFOX1-212ENST00000550418 ST8SIA6P61647 398 aa15.83■□□□□ 0.12
RBFOX1-212ENST00000550418 CSNK2BP67870 215 aa15.83■□□□□ 0.12
RBFOX1-212ENST00000550418 LGALS3BPQ08380 585 aa15.83■□□□□ 0.12
RBFOX1-212ENST00000550418 MINDY2Q8NBR6 621 aa15.83■□□□□ 0.12
RBFOX1-212ENST00000550418 NETO2Q8NC67 525 aa15.83■□□□□ 0.12
RBFOX1-212ENST00000550418 SYNPO2Q9UMS6 1093 aa15.83■□□□□ 0.12
RBFOX1-212ENST00000550418 FAM240BA0A1B0GVZ2 78 aa15.83■□□□□ 0.12
RBFOX1-212ENST00000550418 AGRPO00253 132 aa15.83■□□□□ 0.12
RBFOX1-212ENST00000550418 STK25O00506 426 aa15.83■□□□□ 0.12
RBFOX1-212ENST00000550418 SLC22A2O15244 555 aa15.83■□□□□ 0.12
RBFOX1-212ENST00000550418 XRCC1P18887 633 aaPredicted RBP15.83■□□□□ 0.12
RBFOX1-212ENST00000550418 ITGAXP20702 1163 aa15.83■□□□□ 0.12
RBFOX1-212ENST00000550418 CYP2A7P20853 494 aa15.83■□□□□ 0.12
RBFOX1-212ENST00000550418 CYP2C18P33260 490 aa15.83■□□□□ 0.12
RBFOX1-212ENST00000550418 AKR1D1P51857 326 aa15.83■□□□□ 0.12
RBFOX1-212ENST00000550418 FCGRTP55899 365 aa15.83■□□□□ 0.12
RBFOX1-212ENST00000550418 MERTKQ12866 999 aa15.83■□□□□ 0.12
RBFOX1-212ENST00000550418 SDE2Q6IQ49 451 aa15.83■□□□□ 0.12
RBFOX1-212ENST00000550418 SLC27A1Q6PCB7 646 aa15.83■□□□□ 0.12
RBFOX1-212ENST00000550418 PIGZQ86VD9 579 aa15.83■□□□□ 0.12
RBFOX1-212ENST00000550418 VSIG10LQ86VR7 867 aa15.83■□□□□ 0.12
RBFOX1-212ENST00000550418 GRPEL2Q8TAA5 225 aa15.83■□□□□ 0.12
RBFOX1-212ENST00000550418 SERPINB11Q96P15 392 aa15.83■□□□□ 0.12
RBFOX1-212ENST00000550418 OSMRQ99650 979 aa15.83■□□□□ 0.12
RBFOX1-212ENST00000550418 SP140LQ9H930 580 aa15.83■□□□□ 0.12
RBFOX1-212ENST00000550418 MARCH7Q9H992 704 aa15.83■□□□□ 0.12
RBFOX1-212ENST00000550418 DMAC2Q9NW81 257 aa15.83■□□□□ 0.12
RBFOX1-212ENST00000550418 TOR4AQ9NXH8 423 aa15.83■□□□□ 0.12
RBFOX1-212ENST00000550418 FFAR3O14843 346 aa15.83■□□□□ 0.12
RBFOX1-212ENST00000550418 GPR42O15529 346 aa15.83■□□□□ 0.12
RBFOX1-212ENST00000550418 PLOD3O60568 738 aa15.83■□□□□ 0.12
RBFOX1-212ENST00000550418 NDUFS2O75306 463 aa15.83■□□□□ 0.12
RBFOX1-212ENST00000550418 LYPLA2O95372 231 aa15.83■□□□□ 0.12
RBFOX1-212ENST00000550418 STAT5AP42229 794 aa15.83■□□□□ 0.12
RBFOX1-212ENST00000550418 C5orf22Q49AR2 442 aa15.83■□□□□ 0.12
RBFOX1-212ENST00000550418 KRT74Q7RTS7 529 aa15.83■□□□□ 0.12
RBFOX1-212ENST00000550418 STK40Q8N2I9 435 aa15.83■□□□□ 0.12
RBFOX1-212ENST00000550418 REPS2Q8NFH8 660 aa15.83■□□□□ 0.12
RBFOX1-212ENST00000550418 MCOLN3Q8TDD5 553 aa15.83■□□□□ 0.12
RBFOX1-212ENST00000550418 ROPN1LQ96C74 230 aa15.83■□□□□ 0.12
RBFOX1-212ENST00000550418 MTFMTQ96DP5 389 aaKnown RBP15.83■□□□□ 0.12
RBFOX1-212ENST00000550418 ALG2Q9H553 416 aa15.83■□□□□ 0.12
RBFOX1-212ENST00000550418 VPS28Q9UK41 221 aa15.83■□□□□ 0.12
RBFOX1-212ENST00000550418 MRPS7Q9Y2R9 242 aaKnown RBP15.83■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms