RNA–Protein interactions for RNA: ENST00000550406.1

RAB5C-206, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB5C, Length 500 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-206ENST00000550406 ZBTB32Q9Y2Y4 487 aaPredicted RBP13.08□□□□□ -0.32
RAB5C-206ENST00000550406 ERI2A8K979 691 aaKnown RBP13.07□□□□□ -0.32
RAB5C-206ENST00000550406 WNT9AO14904 365 aa13.07□□□□□ -0.32
RAB5C-206ENST00000550406 RAD51BO15315 384 aa13.07□□□□□ -0.32
RAB5C-206ENST00000550406 TP73O15350 636 aa13.07□□□□□ -0.32
RAB5C-206ENST00000550406 FGF1P05230 155 aa13.07□□□□□ -0.32
RAB5C-206ENST00000550406 C1SP09871 688 aa13.07□□□□□ -0.32
RAB5C-206ENST00000550406 CYP2A6P11509 494 aaPredicted RBP13.07□□□□□ -0.32
RAB5C-206ENST00000550406 TPH1P17752 444 aa13.07□□□□□ -0.32
RAB5C-206ENST00000550406 TPSB2P20231 275 aa13.07□□□□□ -0.32
RAB5C-206ENST00000550406 NBL1P41271 181 aa13.07□□□□□ -0.32
RAB5C-206ENST00000550406 BASP1P80723 227 aaKnown RBP13.07□□□□□ -0.32
RAB5C-206ENST00000550406 CREB5Q02930 508 aa13.07□□□□□ -0.32
RAB5C-206ENST00000550406 PPP1R7Q15435 360 aa13.07□□□□□ -0.32
RAB5C-206ENST00000550406 TPSAB1Q15661 275 aa13.07□□□□□ -0.32
RAB5C-206ENST00000550406 LPAL2Q16609 132 aa13.07□□□□□ -0.32
RAB5C-206ENST00000550406 SPDYCQ5MJ68 293 aa13.07□□□□□ -0.32
RAB5C-206ENST00000550406 LRRC66Q68CR7 880 aa13.07□□□□□ -0.32
RAB5C-206ENST00000550406 KIAA1161Q6NSJ0 714 aa13.07□□□□□ -0.32
RAB5C-206ENST00000550406 PRR23BQ6ZRT6 265 aa13.07□□□□□ -0.32
RAB5C-206ENST00000550406 SYDE1Q6ZW31 735 aaPredicted RBP13.07□□□□□ -0.32
RAB5C-206ENST00000550406 ZNF534Q76KX8 674 aa13.07□□□□□ -0.32
RAB5C-206ENST00000550406 ARMCX6Q7L4S7 300 aa13.07□□□□□ -0.32
RAB5C-206ENST00000550406 LPCAT2Q7L5N7 544 aa13.07□□□□□ -0.32
RAB5C-206ENST00000550406 LYSMD3Q7Z3D4 306 aa13.07□□□□□ -0.32
RAB5C-206ENST00000550406 TECPR1Q7Z6L1 1165 aa13.07□□□□□ -0.32
RAB5C-206ENST00000550406 C11orf74Q86VG3 221 aa13.07□□□□□ -0.32
RAB5C-206ENST00000550406 TTC30BQ8N4P2 665 aa13.07□□□□□ -0.32
RAB5C-206ENST00000550406 MMGT1Q8N4V1 131 aa13.07□□□□□ -0.32
RAB5C-206ENST00000550406 PAF1Q8N7H5 531 aa13.07□□□□□ -0.32
RAB5C-206ENST00000550406 LRRN4CLQ8ND94 238 aa13.07□□□□□ -0.32
RAB5C-206ENST00000550406 OR52K1Q8NGK4 314 aa13.07□□□□□ -0.32
RAB5C-206ENST00000550406 CXorf40AQ8TE69 158 aa13.07□□□□□ -0.32
RAB5C-206ENST00000550406 DNASE2BQ8WZ79 361 aa13.07□□□□□ -0.32
RAB5C-206ENST00000550406 COQ10AQ96MF6 247 aa13.07□□□□□ -0.32
RAB5C-206ENST00000550406 HSPA12BQ96MM6 686 aa13.07□□□□□ -0.32
RAB5C-206ENST00000550406 CARD6Q9BX69 1037 aa13.07□□□□□ -0.32
RAB5C-206ENST00000550406 FSD1LQ9BXM9 530 aa13.07□□□□□ -0.32
RAB5C-206ENST00000550406 SLC17A9Q9BYT1 436 aa13.07□□□□□ -0.32
RAB5C-206ENST00000550406 L2HGDHQ9H9P8 463 aa13.07□□□□□ -0.32
RAB5C-206ENST00000550406 MAGEE1Q9HCI5 957 aa13.07□□□□□ -0.32
RAB5C-206ENST00000550406 CASS4Q9NQ75 786 aa13.07□□□□□ -0.32
RAB5C-206ENST00000550406 EIF2B3Q9NR50 452 aaKnown RBP13.07□□□□□ -0.32
RAB5C-206ENST00000550406 PIH1D1Q9NWS0 290 aaKnown RBP13.07□□□□□ -0.32
RAB5C-206ENST00000550406 SHOC2Q9UQ13 582 aa13.07□□□□□ -0.32
RAB5C-206ENST00000550406 PLXNB3Q9ULL4 1909 aa13.07□□□□□ -0.32
RAB5C-206ENST00000550406 GOLGA6CA6NDK9 693 aa13.06□□□□□ -0.32
RAB5C-206ENST00000550406 GOLGA6BA6NDN3 693 aa13.06□□□□□ -0.32
RAB5C-206ENST00000550406 GOLGA8CPA6NN73 597 aa13.06□□□□□ -0.32
RAB5C-206ENST00000550406 BHMG1C9JSJ3 638 aaPredicted RBP13.06□□□□□ -0.32
RAB5C-206ENST00000550406 NEMP1O14524 444 aa13.06□□□□□ -0.32
RAB5C-206ENST00000550406 DNALI1O14645 258 aaPredicted RBP13.06□□□□□ -0.32
RAB5C-206ENST00000550406 TMEM63AO94886 807 aa13.06□□□□□ -0.32
RAB5C-206ENST00000550406 PAK4O96013 591 aaPredicted RBP13.06□□□□□ -0.32
RAB5C-206ENST00000550406 APRTP07741 180 aa13.06□□□□□ -0.32
RAB5C-206ENST00000550406 GOLGA6DP0CG33 693 aa13.06□□□□□ -0.32
RAB5C-206ENST00000550406 C6P13671 934 aa13.06□□□□□ -0.32
RAB5C-206ENST00000550406 ITPKAP23677 461 aa13.06□□□□□ -0.32
RAB5C-206ENST00000550406 DHPSP49366 369 aaPredicted RBP13.06□□□□□ -0.32
RAB5C-206ENST00000550406 STC1P52823 247 aa13.06□□□□□ -0.32
RAB5C-206ENST00000550406 RPS21P63220 83 aaKnown RBP13.06□□□□□ -0.32
RAB5C-206ENST00000550406 RNASEH2BQ5TBB1 312 aaKnown RBP13.06□□□□□ -0.32
RAB5C-206ENST00000550406 CCDC70Q6NSX1 233 aa13.06□□□□□ -0.32
RAB5C-206ENST00000550406 ZC3H14Q6PJT7 736 aaKnown RBP13.06□□□□□ -0.32
RAB5C-206ENST00000550406 USP45Q70EL2 814 aa13.06□□□□□ -0.32
RAB5C-206ENST00000550406 TMC3Q7Z5M5 1100 aa13.06□□□□□ -0.32
RAB5C-206ENST00000550406 NDUFAF2Q8N183 169 aa13.06□□□□□ -0.32
RAB5C-206ENST00000550406 NAT8LQ8N9F0 302 aa13.06□□□□□ -0.32
RAB5C-206ENST00000550406 PHOX2BQ99453 314 aa13.06□□□□□ -0.32
RAB5C-206ENST00000550406 KLF6Q99612 283 aaPredicted RBP13.06□□□□□ -0.32
RAB5C-206ENST00000550406 LRRC1Q9BTT6 524 aa13.06□□□□□ -0.32
RAB5C-206ENST00000550406 FZD3Q9NPG1 666 aa13.06□□□□□ -0.32
RAB5C-206ENST00000550406 TMEM74BQ9NUR3 256 aa13.06□□□□□ -0.32
RAB5C-206ENST00000550406 GOLGA6AQ9NYA3 693 aa13.06□□□□□ -0.32
RAB5C-206ENST00000550406 EIF2B4Q9UI10 523 aaKnown RBP13.06□□□□□ -0.32
RAB5C-206ENST00000550406 CA5BQ9Y2D0 317 aa13.06□□□□□ -0.32
RAB5C-206ENST00000550406 ZNF711Q9Y462 761 aa13.06□□□□□ -0.32
RAB5C-206ENST00000550406 TMEM131Q92545 1883 aa13.06□□□□□ -0.32
RAB5C-206ENST00000550406 CACNA1HO95180 2353 aa13.05□□□□□ -0.32
RAB5C-206ENST00000550406 C1orf232A0A0U1RR37 186 aa13.05□□□□□ -0.32
RAB5C-206ENST00000550406 A0A1W2PPC4 97 aa13.05□□□□□ -0.32
RAB5C-206ENST00000550406 FAM187AA6NFU0 413 aa13.05□□□□□ -0.32
RAB5C-206ENST00000550406 E7EVH7 732 aa13.05□□□□□ -0.32
RAB5C-206ENST00000550406 SLC31A1O15431 190 aa13.05□□□□□ -0.32
RAB5C-206ENST00000550406 TM7SF2O76062 418 aa13.05□□□□□ -0.32
RAB5C-206ENST00000550406 RHOBTB1O94844 696 aa13.05□□□□□ -0.32
RAB5C-206ENST00000550406 ELFN1P0C7U0 828 aa13.05□□□□□ -0.32
RAB5C-206ENST00000550406 CD27P26842 260 aa13.05□□□□□ -0.32
RAB5C-206ENST00000550406 ADCY8P40145 1251 aa13.05□□□□□ -0.32
RAB5C-206ENST00000550406 RPL21P46778 160 aaKnown RBP13.05□□□□□ -0.32
RAB5C-206ENST00000550406 LMAN1P49257 510 aa13.05□□□□□ -0.32
RAB5C-206ENST00000550406 PTPRCAPQ14761 206 aa13.05□□□□□ -0.32
RAB5C-206ENST00000550406 AGERQ15109 404 aa13.05□□□□□ -0.32
RAB5C-206ENST00000550406 TRADDQ15628 312 aa13.05□□□□□ -0.32
RAB5C-206ENST00000550406 CERCAMQ5T4B2 595 aa13.05□□□□□ -0.32
RAB5C-206ENST00000550406 DENND2CQ68D51 928 aa13.05□□□□□ -0.32
RAB5C-206ENST00000550406 NAPEPLDQ6IQ20 393 aa13.05□□□□□ -0.32
RAB5C-206ENST00000550406 Q6ZVL8 140 aa13.05□□□□□ -0.32
RAB5C-206ENST00000550406 CAND1Q86VP6 1230 aaKnown RBP13.05□□□□□ -0.32
RAB5C-206ENST00000550406 PELI3Q8N2H9 469 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms