RNA–Protein interactions for RNA: ENST00000549578.5

VPS29-206, Transcript of VPS29, retromer complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS29, Length 1,523 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-206ENST00000549578 CACNA1HO95180 2353 aa21.24■□□□□ 0.99
VPS29-206ENST00000549578 C1orf232A0A0U1RR37 186 aa21.24■□□□□ 0.99
VPS29-206ENST00000549578 IGLON5A6NGN9 336 aa21.24■□□□□ 0.99
VPS29-206ENST00000549578 GOLGA8CPA6NN73 597 aa21.24■□□□□ 0.99
VPS29-206ENST00000549578 GOLGA8MH3BSY2 632 aa21.24■□□□□ 0.99
VPS29-206ENST00000549578 LILRB5O75023 590 aa21.24■□□□□ 0.99
VPS29-206ENST00000549578 SEC31AO94979 1220 aaKnown RBP21.24■□□□□ 0.99
VPS29-206ENST00000549578 HEXIM1O94992 359 aaKnown RBP21.24■□□□□ 0.99
VPS29-206ENST00000549578 FSBPO95073 299 aa21.24■□□□□ 0.99
VPS29-206ENST00000549578 CLDN7O95471 211 aa21.24■□□□□ 0.99
VPS29-206ENST00000549578 ELFN1P0C7U0 828 aa21.24■□□□□ 0.99
VPS29-206ENST00000549578 CNR2P34972 360 aa21.24■□□□□ 0.99
VPS29-206ENST00000549578 CDK16Q00536 496 aa21.24■□□□□ 0.99
VPS29-206ENST00000549578 MTM1Q13496 603 aa21.24■□□□□ 0.99
VPS29-206ENST00000549578 ARHGEF7Q14155 803 aa21.24■□□□□ 0.99
VPS29-206ENST00000549578 CDKN3Q16667 212 aa21.24■□□□□ 0.99
VPS29-206ENST00000549578 DENND2CQ68D51 928 aa21.24■□□□□ 0.99
VPS29-206ENST00000549578 KIAA0895LQ68EN5 471 aa21.24■□□□□ 0.99
VPS29-206ENST00000549578 DUPD1Q68J44 220 aa21.24■□□□□ 0.99
VPS29-206ENST00000549578 NEK5Q6P3R8 708 aa21.24■□□□□ 0.99
VPS29-206ENST00000549578 LIPIQ6XZB0 460 aa21.24■□□□□ 0.99
VPS29-206ENST00000549578 ZNF534Q76KX8 674 aa21.24■□□□□ 0.99
VPS29-206ENST00000549578 CEP68Q76N32 757 aa21.24■□□□□ 0.99
VPS29-206ENST00000549578 LYSMD3Q7Z3D4 306 aa21.24■□□□□ 0.99
VPS29-206ENST00000549578 HORMAD1Q86X24 394 aa21.24■□□□□ 0.99
VPS29-206ENST00000549578 KLK6Q92876 244 aa21.24■□□□□ 0.99
VPS29-206ENST00000549578 RAB17Q9H0T7 212 aa21.24■□□□□ 0.99
VPS29-206ENST00000549578 CASS4Q9NQ75 786 aa21.24■□□□□ 0.99
VPS29-206ENST00000549578 COQ6Q9Y2Z9 468 aa21.24■□□□□ 0.99
VPS29-206ENST00000549578 ZNF711Q9Y462 761 aa21.24■□□□□ 0.99
VPS29-206ENST00000549578 LRRK1Q38SD2 2015 aa21.23■□□□□ 0.99
VPS29-206ENST00000549578 TRPM6Q9BX84 2022 aa21.23■□□□□ 0.99
VPS29-206ENST00000549578 C10orf142B7Z368 130 aa21.23■□□□□ 0.99
VPS29-206ENST00000549578 AURKAO14965 403 aa21.23■□□□□ 0.99
VPS29-206ENST00000549578 IGHV4-34P06331 123 aa21.23■□□□□ 0.99
VPS29-206ENST00000549578 C6P13671 934 aa21.23■□□□□ 0.99
VPS29-206ENST00000549578 RPS21P63220 83 aaKnown RBP21.23■□□□□ 0.99
VPS29-206ENST00000549578 CDH17Q12864 832 aa21.23■□□□□ 0.99
VPS29-206ENST00000549578 MSLNQ13421 630 aaPredicted RBP21.23■□□□□ 0.99
VPS29-206ENST00000549578 TMEM259Q4ZIN3 620 aa21.23■□□□□ 0.99
VPS29-206ENST00000549578 KIAA1161Q6NSJ0 714 aa21.23■□□□□ 0.99
VPS29-206ENST00000549578 PCGF5Q86SE9 256 aa21.23■□□□□ 0.99
VPS29-206ENST00000549578 BIRC7Q96CA5 298 aa21.23■□□□□ 0.99
VPS29-206ENST00000549578 VPS13AQ96RL7 3174 aa21.23■□□□□ 0.99
VPS29-206ENST00000549578 DOCK9Q9BZ29 2069 aa21.22■□□□□ 0.99
VPS29-206ENST00000549578 ITGA8P53708 1063 aa21.22■□□□□ 0.99
VPS29-206ENST00000549578 ZNF284Q2VY69 593 aa21.22■□□□□ 0.99
VPS29-206ENST00000549578 ARMCX6Q7L4S7 300 aa21.22■□□□□ 0.99
VPS29-206ENST00000549578 LPCAT2Q7L5N7 544 aa21.22■□□□□ 0.99
VPS29-206ENST00000549578 HSD11B1LQ7Z5J1 315 aa21.22■□□□□ 0.99
VPS29-206ENST00000549578 C11orf74Q86VG3 221 aa21.22■□□□□ 0.99
VPS29-206ENST00000549578 TRIM69Q86WT6 500 aa21.22■□□□□ 0.99
VPS29-206ENST00000549578 SLC41A1Q8IVJ1 513 aa21.22■□□□□ 0.99
VPS29-206ENST00000549578 CADM4Q8NFZ8 388 aa21.22■□□□□ 0.99
VPS29-206ENST00000549578 HSPA12BQ96MM6 686 aa21.22■□□□□ 0.99
VPS29-206ENST00000549578 GPR63Q9BZJ6 419 aa21.22■□□□□ 0.99
VPS29-206ENST00000549578 DUSP15Q9H1R2 295 aaPredicted RBP21.22■□□□□ 0.99
VPS29-206ENST00000549578 DMGDHQ9UI17 866 aaKnown RBP21.22■□□□□ 0.99
VPS29-206ENST00000549578 ZBTB32Q9Y2Y4 487 aaPredicted RBP21.22■□□□□ 0.99
VPS29-206ENST00000549578 THADAQ6YHU6 1953 aa21.22■□□□□ 0.99
VPS29-206ENST00000549578 MYLKQ15746 1914 aa21.21■□□□□ 0.99
VPS29-206ENST00000549578 CEP192Q8TEP8 1941 aa21.21■□□□□ 0.99
VPS29-206ENST00000549578 FANCMQ8IYD8 2048 aa21.21■□□□□ 0.99
VPS29-206ENST00000549578 ESYT3A0FGR9 886 aa21.21■□□□□ 0.99
VPS29-206ENST00000549578 TP73O15350 636 aa21.21■□□□□ 0.99
VPS29-206ENST00000549578 C1SP09871 688 aa21.21■□□□□ 0.99
VPS29-206ENST00000549578 PTGER3P43115 390 aa21.21■□□□□ 0.99
VPS29-206ENST00000549578 SESN2P58004 480 aaPredicted RBP21.21■□□□□ 0.99
VPS29-206ENST00000549578 PTSQ03393 145 aa21.21■□□□□ 0.99
VPS29-206ENST00000549578 SIM2Q14190 667 aaPredicted RBP21.21■□□□□ 0.99
VPS29-206ENST00000549578 FGL2Q14314 439 aa21.21■□□□□ 0.99
VPS29-206ENST00000549578 POU6F1Q14863 301 aa21.21■□□□□ 0.99
VPS29-206ENST00000549578 TRADDQ15628 312 aa21.21■□□□□ 0.99
VPS29-206ENST00000549578 PLK5Q496M5 336 aa21.21■□□□□ 0.99
VPS29-206ENST00000549578 CERCAMQ5T4B2 595 aa21.21■□□□□ 0.99
VPS29-206ENST00000549578 PMS2CLQ68D20 193 aa21.21■□□□□ 0.99
VPS29-206ENST00000549578 HIBCHQ6NVY1 386 aaPredicted RBP21.21■□□□□ 0.99
VPS29-206ENST00000549578 LRRC8BQ6P9F7 803 aa21.21■□□□□ 0.99
VPS29-206ENST00000549578 GLT6D1Q7Z4J2 308 aa21.21■□□□□ 0.99
VPS29-206ENST00000549578 MCUQ8NE86 351 aa21.21■□□□□ 0.99
VPS29-206ENST00000549578 SNX19Q92543 992 aa21.21■□□□□ 0.99
VPS29-206ENST00000549578 EID2BQ96D98 161 aa21.21■□□□□ 0.99
VPS29-206ENST00000549578 PCED1AQ9H1Q7 454 aa21.21■□□□□ 0.99
VPS29-206ENST00000549578 ZFYVE1Q9HBF4 777 aa21.21■□□□□ 0.99
VPS29-206ENST00000549578 HACD3Q9P035 362 aa21.21■□□□□ 0.99
VPS29-206ENST00000549578 USP34Q70CQ2 3546 aa21.2■□□□□ 0.99
VPS29-206ENST00000549578 METTL12A8MUP2 240 aa21.2■□□□□ 0.98
VPS29-206ENST00000549578 LATO43561 262 aa21.2■□□□□ 0.98
VPS29-206ENST00000549578 LZTS3O60299 673 aaPredicted RBP21.2■□□□□ 0.98
VPS29-206ENST00000549578 AVILO75366 819 aa21.2■□□□□ 0.98
VPS29-206ENST00000549578 TM7SF2O76062 418 aa21.2■□□□□ 0.98
VPS29-206ENST00000549578 ZNF30P17039 623 aa21.2■□□□□ 0.98
VPS29-206ENST00000549578 GM2AP17900 193 aa21.2■□□□□ 0.98
VPS29-206ENST00000549578 CCR5P51681 352 aa21.2■□□□□ 0.98
VPS29-206ENST00000549578 STC1P52823 247 aa21.2■□□□□ 0.98
VPS29-206ENST00000549578 SARNPP82979 210 aaKnown RBP21.2■□□□□ 0.98
VPS29-206ENST00000549578 GUCY2DQ02846 1103 aa21.2■□□□□ 0.98
VPS29-206ENST00000549578 MORF4L2Q15014 288 aa21.2■□□□□ 0.98
VPS29-206ENST00000549578 ACOX1Q15067 660 aa21.2■□□□□ 0.98
VPS29-206ENST00000549578 GLE1Q53GS7 698 aaKnown RBP21.2■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms