RNA–Protein interactions for RNA: ENST00000549274.1

SMARCD1-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 3

Gene SMARCD1, Length 611 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-206ENST00000549274 MTG2Q9H4K7 406 aa9.8□□□□□ -0.84
SMARCD1-206ENST00000549274 ZFYVE1Q9HBF4 777 aa9.8□□□□□ -0.84
SMARCD1-206ENST00000549274 PCDH12Q9NPG4 1184 aa9.8□□□□□ -0.84
SMARCD1-206ENST00000549274 GDF3Q9NR23 364 aa9.8□□□□□ -0.84
SMARCD1-206ENST00000549274 SARDHQ9UL12 918 aa9.8□□□□□ -0.84
SMARCD1-206ENST00000549274 MUC3AQ02505 3323 aa9.79□□□□□ -0.84
SMARCD1-206ENST00000549274 CACNA1IQ9P0X4 2223 aa9.79□□□□□ -0.84
SMARCD1-206ENST00000549274 C1orf232A0A0U1RR37 186 aa9.79□□□□□ -0.84
SMARCD1-206ENST00000549274 F5H423 210 aaPredicted RBP9.79□□□□□ -0.84
SMARCD1-206ENST00000549274 K7ESF4 209 aa9.79□□□□□ -0.84
SMARCD1-206ENST00000549274 TOR1BO14657 336 aa9.79□□□□□ -0.84
SMARCD1-206ENST00000549274 AREL1O15033 823 aa9.79□□□□□ -0.84
SMARCD1-206ENST00000549274 PFDN6O15212 129 aa9.79□□□□□ -0.84
SMARCD1-206ENST00000549274 TM7SF2O76062 418 aa9.79□□□□□ -0.84
SMARCD1-206ENST00000549274 SEMA4FO95754 770 aa9.79□□□□□ -0.84
SMARCD1-206ENST00000549274 AGTP01019 485 aa9.79□□□□□ -0.84
SMARCD1-206ENST00000549274 PDGFBP01127 241 aaPredicted RBP9.79□□□□□ -0.84
SMARCD1-206ENST00000549274 PRLP01236 227 aa9.79□□□□□ -0.84
SMARCD1-206ENST00000549274 PDHA1P08559 390 aa9.79□□□□□ -0.84
SMARCD1-206ENST00000549274 GSTA2P09210 222 aa9.79□□□□□ -0.84
SMARCD1-206ENST00000549274 TSHRP16473 764 aa9.79□□□□□ -0.84
SMARCD1-206ENST00000549274 LPOP22079 712 aaPredicted RBP9.79□□□□□ -0.84
SMARCD1-206ENST00000549274 GKP32189 559 aa9.79□□□□□ -0.84
SMARCD1-206ENST00000549274 HMGCLP35914 325 aa9.79□□□□□ -0.84
SMARCD1-206ENST00000549274 PPARGP37231 505 aaPredicted RBP9.79□□□□□ -0.84
SMARCD1-206ENST00000549274 MAGEA3P43357 314 aa9.79□□□□□ -0.84
SMARCD1-206ENST00000549274 CCR5P51681 352 aa9.79□□□□□ -0.84
SMARCD1-206ENST00000549274 ADPRHP54922 357 aa9.79□□□□□ -0.84
SMARCD1-206ENST00000549274 DCDC1P59894 354 aa9.79□□□□□ -0.84
SMARCD1-206ENST00000549274 FAM193AP78312 1265 aa9.79□□□□□ -0.84
SMARCD1-206ENST00000549274 SLC7A5Q01650 507 aa9.79□□□□□ -0.84
SMARCD1-206ENST00000549274 SGCGQ13326 291 aa9.79□□□□□ -0.84
SMARCD1-206ENST00000549274 SETMARQ53H47 684 aaPredicted RBP9.79□□□□□ -0.84
SMARCD1-206ENST00000549274 SYCP2LQ5T4T6 812 aa9.79□□□□□ -0.84
SMARCD1-206ENST00000549274 PIP5KL1Q5T9C9 394 aa9.79□□□□□ -0.84
SMARCD1-206ENST00000549274 PDPK2PQ6A1A2 396 aa9.79□□□□□ -0.84
SMARCD1-206ENST00000549274 WDR93Q6P2C0 686 aa9.79□□□□□ -0.84
SMARCD1-206ENST00000549274 CASC4Q6P4E1 433 aa9.79□□□□□ -0.84
SMARCD1-206ENST00000549274 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP9.79□□□□□ -0.84
SMARCD1-206ENST00000549274 ZNF765Q7L2R6 523 aa9.79□□□□□ -0.84
SMARCD1-206ENST00000549274 CYP2U1Q7Z449 544 aa9.79□□□□□ -0.84
SMARCD1-206ENST00000549274 NLRP8Q86W28 1048 aa9.79□□□□□ -0.84
SMARCD1-206ENST00000549274 TRIM69Q86WT6 500 aa9.79□□□□□ -0.84
SMARCD1-206ENST00000549274 SLC25A41Q8N5S1 370 aa9.79□□□□□ -0.84
SMARCD1-206ENST00000549274 AADATQ8N5Z0 425 aa9.79□□□□□ -0.84
SMARCD1-206ENST00000549274 TMEM105Q8N8V8 129 aa9.79□□□□□ -0.84
SMARCD1-206ENST00000549274 DENND6BQ8NEG7 585 aa9.79□□□□□ -0.84
SMARCD1-206ENST00000549274 OR52K1Q8NGK4 314 aa9.79□□□□□ -0.84
SMARCD1-206ENST00000549274 OR14C36Q8NHC7 312 aa9.79□□□□□ -0.84
SMARCD1-206ENST00000549274 DTX3LQ8TDB6 740 aa9.79□□□□□ -0.84
SMARCD1-206ENST00000549274 BLOC1S5Q8TDH9 187 aa9.79□□□□□ -0.84
SMARCD1-206ENST00000549274 SCG3Q8WXD2 468 aaKnown RBP9.79□□□□□ -0.84
SMARCD1-206ENST00000549274 TBRG4Q969Z0 631 aaKnown RBP eCLIP9.79□□□□□ -0.84
SMARCD1-206ENST00000549274 TTC1Q99614 292 aa9.79□□□□□ -0.84
SMARCD1-206ENST00000549274 GORASP1Q9BQQ3 440 aa9.79□□□□□ -0.84
SMARCD1-206ENST00000549274 KCNH6Q9H252 994 aa9.79□□□□□ -0.84
SMARCD1-206ENST00000549274 NFKBIL1Q9UBC1 381 aaPredicted RBP9.79□□□□□ -0.84
SMARCD1-206ENST00000549274 B4GALT6Q9UBX8 382 aa9.79□□□□□ -0.84
SMARCD1-206ENST00000549274 APPL1Q9UKG1 709 aa9.79□□□□□ -0.84
SMARCD1-206ENST00000549274 DMTF1Q9Y222 760 aa9.79□□□□□ -0.84
SMARCD1-206ENST00000549274 ZNF711Q9Y462 761 aa9.79□□□□□ -0.84
SMARCD1-206ENST00000549274 FADS3Q9Y5Q0 445 aa9.79□□□□□ -0.84
SMARCD1-206ENST00000549274 TBC1D3DA0A087WVF3 549 aa9.78□□□□□ -0.84
SMARCD1-206ENST00000549274 TBC1D3IA0A087WXS9 549 aa9.78□□□□□ -0.84
SMARCD1-206ENST00000549274 TBC1D3EA0A087X179 549 aa9.78□□□□□ -0.84
SMARCD1-206ENST00000549274 TBC1D3KA0A087X1G2 549 aa9.78□□□□□ -0.84
SMARCD1-206ENST00000549274 FAM237BA0A1B0GVD1 139 aa9.78□□□□□ -0.84
SMARCD1-206ENST00000549274 TTC24A2A3L6 582 aaPredicted RBP9.78□□□□□ -0.84
SMARCD1-206ENST00000549274 TBC1D3FA6NER0 549 aaPredicted RBP9.78□□□□□ -0.84
SMARCD1-206ENST00000549274 TBC1D3LB9A6J9 549 aa9.78□□□□□ -0.84
SMARCD1-206ENST00000549274 BHMG1C9JSJ3 638 aaPredicted RBP9.78□□□□□ -0.84
SMARCD1-206ENST00000549274 F8W8V4 182 aa9.78□□□□□ -0.84
SMARCD1-206ENST00000549274 STX7O15400 261 aaKnown RBP9.78□□□□□ -0.84
SMARCD1-206ENST00000549274 MAP3K13O43283 966 aa9.78□□□□□ -0.84
SMARCD1-206ENST00000549274 PI15O43692 258 aa9.78□□□□□ -0.84
SMARCD1-206ENST00000549274 RNGTTO60942 597 aaKnown RBP9.78□□□□□ -0.84
SMARCD1-206ENST00000549274 ERLIN1O75477 346 aa9.78□□□□□ -0.84
SMARCD1-206ENST00000549274 TMEM63AO94886 807 aa9.78□□□□□ -0.84
SMARCD1-206ENST00000549274 PCDH8O95206 1070 aa9.78□□□□□ -0.84
SMARCD1-206ENST00000549274 POLBP06746 335 aa9.78□□□□□ -0.84
SMARCD1-206ENST00000549274 TBC1D3HP0C7X1 549 aa9.78□□□□□ -0.84
SMARCD1-206ENST00000549274 HNF1BP35680 557 aa9.78□□□□□ -0.84
SMARCD1-206ENST00000549274 CREB5Q02930 508 aa9.78□□□□□ -0.84
SMARCD1-206ENST00000549274 SEPT6Q14141 434 aa9.78□□□□□ -0.84
SMARCD1-206ENST00000549274 AGERQ15109 404 aa9.78□□□□□ -0.84
SMARCD1-206ENST00000549274 ELF2Q15723 593 aa9.78□□□□□ -0.84
SMARCD1-206ENST00000549274 POM121L1PQ3SYA9 428 aa9.78□□□□□ -0.84
SMARCD1-206ENST00000549274 CCDC38Q502W7 563 aa9.78□□□□□ -0.84
SMARCD1-206ENST00000549274 TBC1D3GQ6DHY5 549 aa9.78□□□□□ -0.84
SMARCD1-206ENST00000549274 TBC1D3CQ6IPX1 549 aa9.78□□□□□ -0.84
SMARCD1-206ENST00000549274 DENND5AQ6IQ26 1287 aa9.78□□□□□ -0.84
SMARCD1-206ENST00000549274 ZNF449Q6P9G9 518 aa9.78□□□□□ -0.84
SMARCD1-206ENST00000549274 KDELC2Q7Z4H8 507 aa9.78□□□□□ -0.84
SMARCD1-206ENST00000549274 PRUNE1Q86TP1 453 aa9.78□□□□□ -0.84
SMARCD1-206ENST00000549274 HORMAD1Q86X24 394 aa9.78□□□□□ -0.84
SMARCD1-206ENST00000549274 LMNTD2Q8IXW0 634 aa9.78□□□□□ -0.84
SMARCD1-206ENST00000549274 TBC1D3Q8IZP1 549 aaPredicted RBP9.78□□□□□ -0.84
SMARCD1-206ENST00000549274 CBARPQ8N350 705 aaPredicted RBP9.78□□□□□ -0.84
SMARCD1-206ENST00000549274 TAB3Q8N5C8 712 aaPredicted RBP9.78□□□□□ -0.84
SMARCD1-206ENST00000549274 FBXO25Q8TCJ0 367 aa9.78□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms