RNA–Protein interactions for RNA: ENST00000548938.5

HDAC7-228, Transcript of histone deacetylase 7, humanhuman

TSL 5

Gene HDAC7, Length 2,719 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-228ENST00000548938 POLD2P49005 469 aa13.77□□□□□ -0.21
HDAC7-228ENST00000548938 CCT8P50990 548 aa13.77□□□□□ -0.21
HDAC7-228ENST00000548938 TKTL1P51854 596 aa13.77□□□□□ -0.21
HDAC7-228ENST00000548938 STX1BP61266 288 aa13.77□□□□□ -0.21
HDAC7-228ENST00000548938 ATP6V0D1P61421 351 aa13.77□□□□□ -0.21
HDAC7-228ENST00000548938 SCAPQ12770 1279 aa13.77□□□□□ -0.21
HDAC7-228ENST00000548938 INPP5AQ14642 412 aa13.77□□□□□ -0.21
HDAC7-228ENST00000548938 KIF19Q2TAC6 998 aa13.77□□□□□ -0.21
HDAC7-228ENST00000548938 IL31Q6EBC2 164 aa13.77□□□□□ -0.21
HDAC7-228ENST00000548938 DENND5AQ6IQ26 1287 aa13.77□□□□□ -0.21
HDAC7-228ENST00000548938 DCLRE1AQ6PJP8 1040 aa13.77□□□□□ -0.21
HDAC7-228ENST00000548938 FAM35AQ86V20 835 aa13.77□□□□□ -0.21
HDAC7-228ENST00000548938 ADGRG5Q8IZF4 528 aa13.77□□□□□ -0.21
HDAC7-228ENST00000548938 CENPSQ8N2Z9 138 aa13.77□□□□□ -0.21
HDAC7-228ENST00000548938 C2CD4AQ8NCU7 369 aaPredicted RBP13.77□□□□□ -0.21
HDAC7-228ENST00000548938 DDHD1Q8NEL9 900 aa13.77□□□□□ -0.21
HDAC7-228ENST00000548938 APPL2Q8NEU8 664 aa13.77□□□□□ -0.21
HDAC7-228ENST00000548938 PPHLN1Q8NEY8 458 aaKnown RBP13.77□□□□□ -0.21
HDAC7-228ENST00000548938 ROPN1LQ96C74 230 aa13.77□□□□□ -0.21
HDAC7-228ENST00000548938 FBXL8Q96CD0 374 aa13.77□□□□□ -0.21
HDAC7-228ENST00000548938 RPL10LQ96L21 214 aaKnown RBP13.77□□□□□ -0.21
HDAC7-228ENST00000548938 C9orf16Q9BUW7 83 aa13.77□□□□□ -0.21
HDAC7-228ENST00000548938 ULBP1Q9BZM6 244 aa13.77□□□□□ -0.21
HDAC7-228ENST00000548938 BRD8Q9H0E9 1235 aa13.77□□□□□ -0.21
HDAC7-228ENST00000548938 ARMC7Q9H6L4 198 aa13.77□□□□□ -0.21
HDAC7-228ENST00000548938 DDIT4Q9NX09 232 aa13.77□□□□□ -0.21
HDAC7-228ENST00000548938 HACD3Q9P035 362 aa13.77□□□□□ -0.21
HDAC7-228ENST00000548938 FBXO5Q9UKT4 447 aa13.77□□□□□ -0.21
HDAC7-228ENST00000548938 FADS3Q9Y5Q0 445 aa13.77□□□□□ -0.21
HDAC7-228ENST00000548938 PTGDR2Q9Y5Y4 395 aa13.77□□□□□ -0.21
HDAC7-228ENST00000548938 MYLKQ15746 1914 aa13.77□□□□□ -0.21
HDAC7-228ENST00000548938 A0A0J9YYE9 177 aa13.77□□□□□ -0.21
HDAC7-228ENST00000548938 AQP12BA6NM10 295 aa13.77□□□□□ -0.21
HDAC7-228ENST00000548938 FXYD1O00168 92 aa13.77□□□□□ -0.21
HDAC7-228ENST00000548938 ACOX3O15254 700 aa13.77□□□□□ -0.21
HDAC7-228ENST00000548938 ZNF189O75820 626 aaPredicted RBP13.77□□□□□ -0.21
HDAC7-228ENST00000548938 RECQL4O94761 1208 aa13.77□□□□□ -0.21
HDAC7-228ENST00000548938 CAPN3P20807 821 aa13.77□□□□□ -0.21
HDAC7-228ENST00000548938 IL10P22301 178 aa13.77□□□□□ -0.21
HDAC7-228ENST00000548938 HOXA11P31270 313 aaPredicted RBP13.77□□□□□ -0.21
HDAC7-228ENST00000548938 CHRNA4P43681 627 aa13.77□□□□□ -0.21
HDAC7-228ENST00000548938 ACADVLP49748 655 aa13.77□□□□□ -0.21
HDAC7-228ENST00000548938 PHEXP78562 749 aa13.77□□□□□ -0.21
HDAC7-228ENST00000548938 VPS26BQ4G0F5 336 aa13.77□□□□□ -0.21
HDAC7-228ENST00000548938 C1QTNF12Q5T7M4 302 aa13.77□□□□□ -0.21
HDAC7-228ENST00000548938 ANKRD26P1Q6NSI1 321 aa13.77□□□□□ -0.21
HDAC7-228ENST00000548938 C16orf87Q6PH81 154 aa13.77□□□□□ -0.21
HDAC7-228ENST00000548938 ABRAXAS1Q6UWZ7 409 aa13.77□□□□□ -0.21
HDAC7-228ENST00000548938 CLEC20AQ6ZU45 233 aa13.77□□□□□ -0.21
HDAC7-228ENST00000548938 KDELC2Q7Z4H8 507 aa13.77□□□□□ -0.21
HDAC7-228ENST00000548938 AQP12AQ8IXF9 295 aa13.77□□□□□ -0.21
HDAC7-228ENST00000548938 SLC15A3Q8IY34 581 aa13.77□□□□□ -0.21
HDAC7-228ENST00000548938 PCYOX1LQ8NBM8 494 aa13.77□□□□□ -0.21
HDAC7-228ENST00000548938 GTF3C2Q8WUA4 911 aaPredicted RBP13.77□□□□□ -0.21
HDAC7-228ENST00000548938 HDAC10Q969S8 669 aa13.77□□□□□ -0.21
HDAC7-228ENST00000548938 CENPNQ96H22 339 aaPredicted RBP13.77□□□□□ -0.21
HDAC7-228ENST00000548938 SLC45A3Q96JT2 553 aa13.77□□□□□ -0.21
HDAC7-228ENST00000548938 SLC9A7Q96T83 725 aa13.77□□□□□ -0.21
HDAC7-228ENST00000548938 KLK14Q9P0G3 267 aa13.77□□□□□ -0.21
HDAC7-228ENST00000548938 ABCD2Q9UBJ2 740 aa13.77□□□□□ -0.21
HDAC7-228ENST00000548938 FBXW11Q9UKB1 542 aa13.77□□□□□ -0.21
HDAC7-228ENST00000548938 TCAF1Q9Y4C2 921 aa13.77□□□□□ -0.21
HDAC7-228ENST00000548938 RASAL1O95294 804 aa13.76□□□□□ -0.21
HDAC7-228ENST00000548938 CELF2O95319 508 aaKnown RBP13.76□□□□□ -0.21
HDAC7-228ENST00000548938 ZNF182P17025 639 aaPredicted RBP13.76□□□□□ -0.21
HDAC7-228ENST00000548938 BMXP51813 675 aa13.76□□□□□ -0.21
HDAC7-228ENST00000548938 MAP3K7CLP57077 242 aa13.76□□□□□ -0.21
HDAC7-228ENST00000548938 FKBP1BP68106 108 aa13.76□□□□□ -0.21
HDAC7-228ENST00000548938 POU4F1Q01851 419 aa13.76□□□□□ -0.21
HDAC7-228ENST00000548938 SEPT6Q14141 434 aa13.76□□□□□ -0.21
HDAC7-228ENST00000548938 INTS6LQ5JSJ4 861 aaKnown RBP13.76□□□□□ -0.21
HDAC7-228ENST00000548938 PAQR9Q6ZVX9 377 aa13.76□□□□□ -0.21
HDAC7-228ENST00000548938 C19orf60Q96EN9 201 aa13.76□□□□□ -0.21
HDAC7-228ENST00000548938 MYRFLQ96LU7 910 aa13.76□□□□□ -0.21
HDAC7-228ENST00000548938 HNRNPABQ99729 332 aaKnown RBP13.76□□□□□ -0.21
HDAC7-228ENST00000548938 TRIM15Q9C019 465 aa13.76□□□□□ -0.21
HDAC7-228ENST00000548938 ATXN3LQ9H3M9 355 aa13.76□□□□□ -0.21
HDAC7-228ENST00000548938 TUT1Q9H6E5 874 aaKnown RBP13.76□□□□□ -0.21
HDAC7-228ENST00000548938 CMTM6Q9NX76 183 aa13.76□□□□□ -0.21
HDAC7-228ENST00000548938 SLC45A1Q9Y2W3 748 aa13.76□□□□□ -0.21
HDAC7-228ENST00000548938 AP3B1O00203 1094 aa13.76□□□□□ -0.21
HDAC7-228ENST00000548938 PIRO00625 290 aa13.76□□□□□ -0.21
HDAC7-228ENST00000548938 ARPC2O15144 300 aa13.76□□□□□ -0.21
HDAC7-228ENST00000548938 LRIG2O94898 1065 aa13.76□□□□□ -0.21
HDAC7-228ENST00000548938 ZNF12P17014 697 aa13.76□□□□□ -0.21
HDAC7-228ENST00000548938 CCNA1P78396 465 aa13.76□□□□□ -0.21
HDAC7-228ENST00000548938 ARHGAP1Q07960 439 aa13.76□□□□□ -0.21
HDAC7-228ENST00000548938 PDCD4Q53EL6 469 aaKnown RBP13.76□□□□□ -0.21
HDAC7-228ENST00000548938 LCN8Q6JVE9 175 aa13.76□□□□□ -0.21
HDAC7-228ENST00000548938 NCCRP1Q6ZVX7 275 aaPredicted RBP13.76□□□□□ -0.21
HDAC7-228ENST00000548938 ARMCX2Q7L311 632 aa13.76□□□□□ -0.21
HDAC7-228ENST00000548938 SPRED1Q7Z699 444 aa13.76□□□□□ -0.21
HDAC7-228ENST00000548938 ANKRD49Q8WVL7 239 aa13.76□□□□□ -0.21
HDAC7-228ENST00000548938 TNIP3Q96KP6 325 aa13.76□□□□□ -0.21
HDAC7-228ENST00000548938 ADAMTS10Q9H324 1103 aa13.76□□□□□ -0.21
HDAC7-228ENST00000548938 TBC1D13Q9NVG8 400 aa13.76□□□□□ -0.21
HDAC7-228ENST00000548938 CENPFP49454 3210 aa13.75□□□□□ -0.21
HDAC7-228ENST00000548938 LTA4HP09960 611 aaKnown RBP13.75□□□□□ -0.21
HDAC7-228ENST00000548938 MTHFD1P11586 935 aaKnown RBP13.75□□□□□ -0.21
HDAC7-228ENST00000548938 NCAM1P13591 858 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms