RNA–Protein interactions for RNA: ENST00000548650.1

CHMP1A-205, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 3

Gene CHMP1A, Length 566 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-205ENST00000548650 TTC24A2A3L6 582 aaPredicted RBP17.45■□□□□ 0.38
CHMP1A-205ENST00000548650 CDRT15L2A8MXV6 281 aa17.45■□□□□ 0.38
CHMP1A-205ENST00000548650 D6RAR5 112 aa17.45■□□□□ 0.38
CHMP1A-205ENST00000548650 CACNB4O00305 520 aaPredicted RBP17.45■□□□□ 0.38
CHMP1A-205ENST00000548650 HTRA2O43464 458 aaPredicted RBP17.45■□□□□ 0.38
CHMP1A-205ENST00000548650 SOCS5O75159 536 aa17.45■□□□□ 0.38
CHMP1A-205ENST00000548650 C1QL1O75973 258 aa17.45■□□□□ 0.38
CHMP1A-205ENST00000548650 AMPD1P23109 780 aa17.45■□□□□ 0.38
CHMP1A-205ENST00000548650 HSPA9P38646 679 aaKnown RBP17.45■□□□□ 0.38
CHMP1A-205ENST00000548650 PBX1P40424 430 aa17.45■□□□□ 0.38
CHMP1A-205ENST00000548650 ARL4AP40617 200 aa17.45■□□□□ 0.38
CHMP1A-205ENST00000548650 TMPRSS3P57727 454 aa17.45■□□□□ 0.38
CHMP1A-205ENST00000548650 POLR2LP62875 67 aaKnown RBP17.45■□□□□ 0.38
CHMP1A-205ENST00000548650 SLC25A11Q02978 314 aaKnown RBP17.45■□□□□ 0.38
CHMP1A-205ENST00000548650 TDRD12Q587J7 1177 aaKnown RBP17.45■□□□□ 0.38
CHMP1A-205ENST00000548650 B3GNT8Q7Z7M8 397 aa17.45■□□□□ 0.38
CHMP1A-205ENST00000548650 PAF1Q8N7H5 531 aa17.45■□□□□ 0.38
CHMP1A-205ENST00000548650 NIPA2Q8N8Q9 360 aa17.45■□□□□ 0.38
CHMP1A-205ENST00000548650 OR56A4Q8NGH8 313 aa17.45■□□□□ 0.38
CHMP1A-205ENST00000548650 WDR36Q8NI36 951 aaKnown RBP17.45■□□□□ 0.38
CHMP1A-205ENST00000548650 SLC39A7Q92504 469 aa17.45■□□□□ 0.38
CHMP1A-205ENST00000548650 HSPH1Q92598 858 aa17.45■□□□□ 0.38
CHMP1A-205ENST00000548650 COQ10AQ96MF6 247 aa17.45■□□□□ 0.38
CHMP1A-205ENST00000548650 MGME1Q9BQP7 344 aa17.45■□□□□ 0.38
CHMP1A-205ENST00000548650 MRPL40Q9NQ50 206 aaKnown RBP17.45■□□□□ 0.38
CHMP1A-205ENST00000548650 UNC13CQ8NB66 2214 aa17.45■□□□□ 0.38
CHMP1A-205ENST00000548650 CCDC187A0A096LP49 1063 aa17.44■□□□□ 0.38
CHMP1A-205ENST00000548650 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP17.44■□□□□ 0.38
CHMP1A-205ENST00000548650 A0A1W2PQJ5 194 aa17.44■□□□□ 0.38
CHMP1A-205ENST00000548650 A0A1W2PQM1 296 aa17.44■□□□□ 0.38
CHMP1A-205ENST00000548650 TK2O00142 265 aa17.44■□□□□ 0.38
CHMP1A-205ENST00000548650 MAFKO60675 156 aa17.44■□□□□ 0.38
CHMP1A-205ENST00000548650 CPP00450 1065 aa17.44■□□□□ 0.38
CHMP1A-205ENST00000548650 SERPINC1P01008 464 aa17.44■□□□□ 0.38
CHMP1A-205ENST00000548650 HOXC4P09017 264 aaPredicted RBP17.44■□□□□ 0.38
CHMP1A-205ENST00000548650 RARAP10276 462 aa17.44■□□□□ 0.38
CHMP1A-205ENST00000548650 RBMS1P29558 406 aaKnown RBP17.44■□□□□ 0.38
CHMP1A-205ENST00000548650 TRIM23P36406 574 aa17.44■□□□□ 0.38
CHMP1A-205ENST00000548650 UCNP55089 124 aa17.44■□□□□ 0.38
CHMP1A-205ENST00000548650 CNGA3Q16281 694 aa17.44■□□□□ 0.38
CHMP1A-205ENST00000548650 BOLA3Q53S33 107 aa17.44■□□□□ 0.38
CHMP1A-205ENST00000548650 PCSK4Q6UW60 755 aa17.44■□□□□ 0.38
CHMP1A-205ENST00000548650 CLEC14AQ86T13 490 aa17.44■□□□□ 0.38
CHMP1A-205ENST00000548650 ATPAF2Q8N5M1 289 aa17.44■□□□□ 0.38
CHMP1A-205ENST00000548650 GPR156Q8NFN8 814 aa17.44■□□□□ 0.38
CHMP1A-205ENST00000548650 LIN37Q96GY3 246 aaPredicted RBP17.44■□□□□ 0.38
CHMP1A-205ENST00000548650 NUDCD1Q96RS6 583 aa17.44■□□□□ 0.38
CHMP1A-205ENST00000548650 LGR4Q9BXB1 951 aa17.44■□□□□ 0.38
CHMP1A-205ENST00000548650 THAP2Q9H0W7 228 aa17.44■□□□□ 0.38
CHMP1A-205ENST00000548650 WDR26Q9H7D7 661 aa17.44■□□□□ 0.38
CHMP1A-205ENST00000548650 CPNE5Q9HCH3 593 aa17.44■□□□□ 0.38
CHMP1A-205ENST00000548650 PCDH18Q9HCL0 1135 aa17.44■□□□□ 0.38
CHMP1A-205ENST00000548650 SSUH2Q9Y2M2 353 aa17.44■□□□□ 0.38
CHMP1A-205ENST00000548650 PCDHGC4Q9Y5F7 938 aa17.44■□□□□ 0.38
CHMP1A-205ENST00000548650 AHCTF1Q8WYP5 2266 aa17.44■□□□□ 0.38
CHMP1A-205ENST00000548650 ATMQ13315 3056 aa17.43■□□□□ 0.38
CHMP1A-205ENST00000548650 A8MX80 341 aa17.43■□□□□ 0.38
CHMP1A-205ENST00000548650 TNFRSF10CO14798 259 aa17.43■□□□□ 0.38
CHMP1A-205ENST00000548650 KLK10O43240 276 aa17.43■□□□□ 0.38
CHMP1A-205ENST00000548650 NOBOXO60393 691 aa17.43■□□□□ 0.38
CHMP1A-205ENST00000548650 TNFP01375 233 aa17.43■□□□□ 0.38
CHMP1A-205ENST00000548650 RPLP0P05388 317 aaKnown RBP17.43■□□□□ 0.38
CHMP1A-205ENST00000548650 LHCGRP22888 699 aa17.43■□□□□ 0.38
CHMP1A-205ENST00000548650 KELP23276 732 aa17.43■□□□□ 0.38
CHMP1A-205ENST00000548650 MLLT3P42568 568 aaPredicted RBP17.43■□□□□ 0.38
CHMP1A-205ENST00000548650 TRAF2Q12933 501 aa17.43■□□□□ 0.38
CHMP1A-205ENST00000548650 PIGHQ14442 188 aaPredicted RBP17.43■□□□□ 0.38
CHMP1A-205ENST00000548650 ACOX1Q15067 660 aa17.43■□□□□ 0.38
CHMP1A-205ENST00000548650 BROXQ5VW32 411 aa17.43■□□□□ 0.38
CHMP1A-205ENST00000548650 SFTPA2Q8IWL1 248 aa17.43■□□□□ 0.38
CHMP1A-205ENST00000548650 LSM14AQ8ND56 463 aaKnown RBP17.43■□□□□ 0.38
CHMP1A-205ENST00000548650 TEKT4Q8WW24 435 aa17.43■□□□□ 0.38
CHMP1A-205ENST00000548650 SYN2Q92777 582 aaPredicted RBP17.43■□□□□ 0.38
CHMP1A-205ENST00000548650 NUS1Q96E22 293 aa17.43■□□□□ 0.38
CHMP1A-205ENST00000548650 BTBD6Q96KE9 485 aa17.43■□□□□ 0.38
CHMP1A-205ENST00000548650 GFM1Q96RP9 751 aaKnown RBP17.43■□□□□ 0.38
CHMP1A-205ENST00000548650 DPH1Q9BZG8 443 aa17.43■□□□□ 0.38
CHMP1A-205ENST00000548650 NOD2Q9HC29 1040 aa17.43■□□□□ 0.38
CHMP1A-205ENST00000548650 A0A1W2PQ67 120 aa17.42■□□□□ 0.38
CHMP1A-205ENST00000548650 HEXIM1O94992 359 aaKnown RBP17.42■□□□□ 0.38
CHMP1A-205ENST00000548650 ITGA2BP08514 1039 aa17.42■□□□□ 0.38
CHMP1A-205ENST00000548650 MYCLP1P12525 358 aaPredicted RBP17.42■□□□□ 0.38
CHMP1A-205ENST00000548650 VIPR1P32241 457 aa17.42■□□□□ 0.38
CHMP1A-205ENST00000548650 SERPINB6P35237 376 aa17.42■□□□□ 0.38
CHMP1A-205ENST00000548650 MAXP61244 160 aa17.42■□□□□ 0.38
CHMP1A-205ENST00000548650 CCL7P80098 99 aa17.42■□□□□ 0.38
CHMP1A-205ENST00000548650 CERCAMQ5T4B2 595 aa17.42■□□□□ 0.38
CHMP1A-205ENST00000548650 PNCKQ6P2M8 343 aa17.42■□□□□ 0.38
CHMP1A-205ENST00000548650 FOXR1Q6PIV2 292 aa17.42■□□□□ 0.38
CHMP1A-205ENST00000548650 LUZP1Q86V48 1076 aa17.42■□□□□ 0.38
CHMP1A-205ENST00000548650 OR6C4Q8NGE1 309 aa17.42■□□□□ 0.38
CHMP1A-205ENST00000548650 CCL4L1Q8NHW4 92 aa17.42■□□□□ 0.38
CHMP1A-205ENST00000548650 PDCD6IPQ8WUM4 868 aaKnown RBP17.42■□□□□ 0.38
CHMP1A-205ENST00000548650 MCCC1Q96RQ3 725 aaPredicted RBP17.42■□□□□ 0.38
CHMP1A-205ENST00000548650 NUP85Q9BW27 656 aa17.42■□□□□ 0.38
CHMP1A-205ENST00000548650 TMEM168Q9H0V1 697 aa17.42■□□□□ 0.38
CHMP1A-205ENST00000548650 CBX8Q9HC52 389 aa17.42■□□□□ 0.38
CHMP1A-205ENST00000548650 EPB41L5Q9HCM4 733 aa17.42■□□□□ 0.38
CHMP1A-205ENST00000548650 ANAPC7Q9UJX3 599 aa17.42■□□□□ 0.38
CHMP1A-205ENST00000548650 ZFC3H1O60293 1989 aaKnown RBP17.42■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms