RNA–Protein interactions for RNA: ENST00000548132.1

GCN1-204, Transcript of GCN1, eIF2 alpha kinase activator homolog, humanhuman

TSL 3

Gene GCN1, Length 498 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCN1-204ENST00000548132 MRPL40Q9NQ50 206 aaKnown RBP12.49□□□□□ -0.41
GCN1-204ENST00000548132 DONSONQ9NYP3 566 aa12.49□□□□□ -0.41
GCN1-204ENST00000548132 KLQ9UEF7 1012 aa12.49□□□□□ -0.41
GCN1-204ENST00000548132 PCDHGC4Q9Y5F7 938 aa12.49□□□□□ -0.41
GCN1-204ENST00000548132 RAI2Q9Y5P3 530 aa12.49□□□□□ -0.41
GCN1-204ENST00000548132 ST14Q9Y5Y6 855 aa12.49□□□□□ -0.41
GCN1-204ENST00000548132 DGKBQ9Y6T7 804 aa12.49□□□□□ -0.41
GCN1-204ENST00000548132 SDK2Q58EX2 2172 aa12.48□□□□□ -0.41
GCN1-204ENST00000548132 A0A1W2PQM1 296 aa12.48□□□□□ -0.41
GCN1-204ENST00000548132 CPED1A4D0V7 1026 aa12.48□□□□□ -0.41
GCN1-204ENST00000548132 NOBOXO60393 691 aa12.48□□□□□ -0.41
GCN1-204ENST00000548132 USP12O75317 370 aa12.48□□□□□ -0.41
GCN1-204ENST00000548132 HEXIM1O94992 359 aaKnown RBP12.48□□□□□ -0.41
GCN1-204ENST00000548132 CPP00450 1065 aa12.48□□□□□ -0.41
GCN1-204ENST00000548132 XPAP23025 273 aaPredicted RBP12.48□□□□□ -0.41
GCN1-204ENST00000548132 TRIM23P36406 574 aa12.48□□□□□ -0.41
GCN1-204ENST00000548132 HSPA9P38646 679 aaKnown RBP12.48□□□□□ -0.41
GCN1-204ENST00000548132 ARL4AP40617 200 aa12.48□□□□□ -0.41
GCN1-204ENST00000548132 SRP54P61011 504 aaKnown RBP12.48□□□□□ -0.41
GCN1-204ENST00000548132 TLE3Q04726 772 aa12.48□□□□□ -0.41
GCN1-204ENST00000548132 GALNT2Q10471 571 aa12.48□□□□□ -0.41
GCN1-204ENST00000548132 BOLA3Q53S33 107 aa12.48□□□□□ -0.41
GCN1-204ENST00000548132 ALKBH5Q6P6C2 394 aaKnown RBP12.48□□□□□ -0.41
GCN1-204ENST00000548132 IGF2-ASQ6U949 168 aa12.48□□□□□ -0.41
GCN1-204ENST00000548132 PCSK4Q6UW60 755 aa12.48□□□□□ -0.41
GCN1-204ENST00000548132 RFLNAQ6ZTI6 216 aa12.48□□□□□ -0.41
GCN1-204ENST00000548132 HSD11B1LQ7Z5J1 315 aa12.48□□□□□ -0.41
GCN1-204ENST00000548132 B3GNT8Q7Z7M8 397 aa12.48□□□□□ -0.41
GCN1-204ENST00000548132 CBARPQ8N350 705 aaPredicted RBP12.48□□□□□ -0.41
GCN1-204ENST00000548132 FSTL5Q8N475 847 aaPredicted RBP12.48□□□□□ -0.41
GCN1-204ENST00000548132 TEX26Q8N6G2 289 aa12.48□□□□□ -0.41
GCN1-204ENST00000548132 PQLC3Q8N755 202 aa12.48□□□□□ -0.41
GCN1-204ENST00000548132 ARL10Q8N8L6 244 aa12.48□□□□□ -0.41
GCN1-204ENST00000548132 CCL4L1Q8NHW4 92 aa12.48□□□□□ -0.41
GCN1-204ENST00000548132 LRRN4Q8WUT4 740 aa12.48□□□□□ -0.41
GCN1-204ENST00000548132 CPLX3Q8WVH0 158 aa12.48□□□□□ -0.41
GCN1-204ENST00000548132 MAML1Q92585 1016 aa12.48□□□□□ -0.41
GCN1-204ENST00000548132 CCDC74AQ96AQ1 378 aa12.48□□□□□ -0.41
GCN1-204ENST00000548132 DTD2Q96FN9 168 aa12.48□□□□□ -0.41
GCN1-204ENST00000548132 DNAJC7Q99615 494 aa12.48□□□□□ -0.41
GCN1-204ENST00000548132 IL12RB2Q99665 862 aa12.48□□□□□ -0.41
GCN1-204ENST00000548132 CCDC3Q9BQI4 270 aa12.48□□□□□ -0.41
GCN1-204ENST00000548132 SLC13A1Q9BZW2 595 aa12.48□□□□□ -0.41
GCN1-204ENST00000548132 RCOR3Q9P2K3 495 aaPredicted RBP12.48□□□□□ -0.41
GCN1-204ENST00000548132 AK5Q9Y6K8 562 aa12.48□□□□□ -0.41
GCN1-204ENST00000548132 PIEZO2Q9H5I5 2752 aa12.48□□□□□ -0.41
GCN1-204ENST00000548132 A8MX80 341 aa12.47□□□□□ -0.41
GCN1-204ENST00000548132 D6RAR5 112 aa12.47□□□□□ -0.41
GCN1-204ENST00000548132 RASGRP1O95267 797 aa12.47□□□□□ -0.41
GCN1-204ENST00000548132 PGLSO95336 258 aa12.47□□□□□ -0.41
GCN1-204ENST00000548132 FUCA1P04066 466 aa12.47□□□□□ -0.41
GCN1-204ENST00000548132 ANXA6P08133 673 aa12.47□□□□□ -0.41
GCN1-204ENST00000548132 PDHA1P08559 390 aa12.47□□□□□ -0.41
GCN1-204ENST00000548132 VIPR1P32241 457 aa12.47□□□□□ -0.41
GCN1-204ENST00000548132 GJC1P36383 396 aa12.47□□□□□ -0.41
GCN1-204ENST00000548132 MMP13P45452 471 aa12.47□□□□□ -0.41
GCN1-204ENST00000548132 DUSP3P51452 185 aaPredicted RBP12.47□□□□□ -0.41
GCN1-204ENST00000548132 CDH6P55285 790 aa12.47□□□□□ -0.41
GCN1-204ENST00000548132 PAFAH1B3Q15102 231 aaKnown RBP12.47□□□□□ -0.41
GCN1-204ENST00000548132 HS1BP3Q53T59 392 aa12.47□□□□□ -0.41
GCN1-204ENST00000548132 C3orf38Q5JPI3 329 aa12.47□□□□□ -0.41
GCN1-204ENST00000548132 FAM182AQ5T1J6 154 aa12.47□□□□□ -0.41
GCN1-204ENST00000548132 CFAP58Q5T655 872 aa12.47□□□□□ -0.41
GCN1-204ENST00000548132 FAXCQ5TGI0 409 aa12.47□□□□□ -0.41
GCN1-204ENST00000548132 ENPP7Q6UWV6 458 aa12.47□□□□□ -0.41
GCN1-204ENST00000548132 NRROSQ86YC3 692 aa12.47□□□□□ -0.41
GCN1-204ENST00000548132 SPACA3Q8IXA5 215 aa12.47□□□□□ -0.41
GCN1-204ENST00000548132 GPR156Q8NFN8 814 aa12.47□□□□□ -0.41
GCN1-204ENST00000548132 PIH1D2Q8WWB5 315 aa12.47□□□□□ -0.41
GCN1-204ENST00000548132 NUS1Q96E22 293 aa12.47□□□□□ -0.41
GCN1-204ENST00000548132 ZNF670Q9BS34 389 aa12.47□□□□□ -0.41
GCN1-204ENST00000548132 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP12.47□□□□□ -0.41
GCN1-204ENST00000548132 FRMD8Q9BZ67 464 aaPredicted RBP12.47□□□□□ -0.41
GCN1-204ENST00000548132 NCKIPSDQ9NZQ3 722 aa12.47□□□□□ -0.41
GCN1-204ENST00000548132 SIRPGQ9P1W8 387 aa12.47□□□□□ -0.41
GCN1-204ENST00000548132 IP6K2Q9UHH9 426 aa12.47□□□□□ -0.41
GCN1-204ENST00000548132 SATB2Q9UPW6 733 aa12.47□□□□□ -0.41
GCN1-204ENST00000548132 BZW2Q9Y6E2 419 aaKnown RBP12.47□□□□□ -0.41
GCN1-204ENST00000548132 BOD1L1Q8NFC6 3051 aa12.46□□□□□ -0.41
GCN1-204ENST00000548132 TLN1Q9Y490 2541 aaKnown RBP12.46□□□□□ -0.41
GCN1-204ENST00000548132 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP12.46□□□□□ -0.41
GCN1-204ENST00000548132 PRSS38A1L453 326 aa12.46□□□□□ -0.41
GCN1-204ENST00000548132 TCEA3O75764 348 aa12.46□□□□□ -0.41
GCN1-204ENST00000548132 C1QL1O75973 258 aa12.46□□□□□ -0.41
GCN1-204ENST00000548132 PROSCO94903 275 aa12.46□□□□□ -0.41
GCN1-204ENST00000548132 HLA-DQB2P05538 268 aa12.46□□□□□ -0.41
GCN1-204ENST00000548132 HOXC4P09017 264 aaPredicted RBP12.46□□□□□ -0.41
GCN1-204ENST00000548132 ALPIP09923 528 aa12.46□□□□□ -0.41
GCN1-204ENST00000548132 MYCLP1P12525 358 aaPredicted RBP12.46□□□□□ -0.41
GCN1-204ENST00000548132 SERPINB6P35237 376 aa12.46□□□□□ -0.41
GCN1-204ENST00000548132 ETV3P41162 512 aa12.46□□□□□ -0.41
GCN1-204ENST00000548132 GARSP41250 739 aaKnown RBP12.46□□□□□ -0.41
GCN1-204ENST00000548132 LSSP48449 732 aa12.46□□□□□ -0.41
GCN1-204ENST00000548132 GBE1Q04446 702 aa12.46□□□□□ -0.41
GCN1-204ENST00000548132 SLC10A2Q12908 348 aaPredicted RBP12.46□□□□□ -0.41
GCN1-204ENST00000548132 COL9A2Q14055 689 aaPredicted RBP12.46□□□□□ -0.41
GCN1-204ENST00000548132 SLC18A3Q16572 532 aa12.46□□□□□ -0.41
GCN1-204ENST00000548132 CCDC122Q5T0U0 273 aa12.46□□□□□ -0.41
GCN1-204ENST00000548132 RBM44Q6ZP01 1051 aaKnown RBP12.46□□□□□ -0.41
GCN1-204ENST00000548132 TMPRSS9Q7Z410 1059 aa12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms