RNA–Protein interactions for RNA: ENST00000547486.1

CPSF6-204, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 2

Gene CPSF6, Length 872 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-204ENST00000547486 RBM15Q96T37 977 aaKnown RBP eCLIP13.39□□□□□ -0.271e-10■□□□□ 11.1
CPSF6-204ENST00000547486 NUP85Q9BW27 656 aa13.39□□□□□ -0.27
CPSF6-204ENST00000547486 FGF22Q9HCT0 170 aa13.39□□□□□ -0.27
CPSF6-204ENST00000547486 ANAPC7Q9UJX3 599 aa13.39□□□□□ -0.27
CPSF6-204ENST00000547486 GPR34Q9UPC5 381 aa13.39□□□□□ -0.27
CPSF6-204ENST00000547486 DOLKQ9UPQ8 538 aa13.39□□□□□ -0.27
CPSF6-204ENST00000547486 DGKBQ9Y6T7 804 aa13.39□□□□□ -0.27
CPSF6-204ENST00000547486 A0A0U1RQS6 177 aa13.38□□□□□ -0.27
CPSF6-204ENST00000547486 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP13.38□□□□□ -0.27
CPSF6-204ENST00000547486 NTN3O00634 580 aaPredicted RBP13.38□□□□□ -0.27
CPSF6-204ENST00000547486 TCEA3O75764 348 aa13.38□□□□□ -0.27
CPSF6-204ENST00000547486 TNFP01375 233 aa13.38□□□□□ -0.27
CPSF6-204ENST00000547486 FUCA1P04066 466 aa13.38□□□□□ -0.27
CPSF6-204ENST00000547486 GYPCP04921 128 aa13.38□□□□□ -0.27
CPSF6-204ENST00000547486 HOXC4P09017 264 aaPredicted RBP13.38□□□□□ -0.27
CPSF6-204ENST00000547486 ARSEP51690 589 aa13.38□□□□□ -0.27
CPSF6-204ENST00000547486 KIAA1024LP59773 190 aa13.38□□□□□ -0.27
CPSF6-204ENST00000547486 TRAF2Q12933 501 aa13.38□□□□□ -0.27
CPSF6-204ENST00000547486 ZNF235Q14590 738 aa13.38□□□□□ -0.27
CPSF6-204ENST00000547486 IHHQ14623 411 aa13.38□□□□□ -0.27
CPSF6-204ENST00000547486 ACOX1Q15067 660 aa13.38□□□□□ -0.27
CPSF6-204ENST00000547486 NFKBIBQ15653 356 aa13.38□□□□□ -0.27
CPSF6-204ENST00000547486 C3orf38Q5JPI3 329 aa13.38□□□□□ -0.27
CPSF6-204ENST00000547486 ALKBH5Q6P6C2 394 aaKnown RBP13.38□□□□□ -0.27
CPSF6-204ENST00000547486 PAF1Q8N7H5 531 aa13.38□□□□□ -0.27
CPSF6-204ENST00000547486 CCL4L1Q8NHW4 92 aa13.38□□□□□ -0.27
CPSF6-204ENST00000547486 FAM71BQ8TC56 605 aa13.38□□□□□ -0.27
CPSF6-204ENST00000547486 PDCD6IPQ8WUM4 868 aaKnown RBP13.38□□□□□ -0.27
CPSF6-204ENST00000547486 SCG3Q8WXD2 468 aaKnown RBP13.38□□□□□ -0.27
CPSF6-204ENST00000547486 SPOCK2Q92563 424 aa13.38□□□□□ -0.27
CPSF6-204ENST00000547486 CCDC74AQ96AQ1 378 aa13.38□□□□□ -0.27
CPSF6-204ENST00000547486 SMIM14Q96QK8 99 aa13.38□□□□□ -0.27
CPSF6-204ENST00000547486 MGME1Q9BQP7 344 aa13.38□□□□□ -0.27
CPSF6-204ENST00000547486 TMEM168Q9H0V1 697 aa13.38□□□□□ -0.27
CPSF6-204ENST00000547486 IP6K2Q9UHH9 426 aa13.38□□□□□ -0.27
CPSF6-204ENST00000547486 NENFQ9UMX5 172 aa13.38□□□□□ -0.27
CPSF6-204ENST00000547486 ATRXP46100 2492 aa13.38□□□□□ -0.27
CPSF6-204ENST00000547486 A0A1W2PQM1 296 aa13.37□□□□□ -0.27
CPSF6-204ENST00000547486 LHCGRP22888 699 aa13.37□□□□□ -0.27
CPSF6-204ENST00000547486 CDH6P55285 790 aa13.37□□□□□ -0.27
CPSF6-204ENST00000547486 PCBP4P57723 403 aaKnown RBP13.37□□□□□ -0.27
CPSF6-204ENST00000547486 ERVPABLB-1P60509 514 aa13.37□□□□□ -0.27
CPSF6-204ENST00000547486 CCL7P80098 99 aa13.37□□□□□ -0.27
CPSF6-204ENST00000547486 CNGA3Q16281 694 aa13.37□□□□□ -0.27
CPSF6-204ENST00000547486 CCDC122Q5T0U0 273 aa13.37□□□□□ -0.27
CPSF6-204ENST00000547486 MARC1Q5VT66 337 aa13.37□□□□□ -0.27
CPSF6-204ENST00000547486 DENND2CQ68D51 928 aa13.37□□□□□ -0.27
CPSF6-204ENST00000547486 OGFOD3Q6PK18 319 aa13.37□□□□□ -0.27
CPSF6-204ENST00000547486 IGF2-ASQ6U949 168 aa13.37□□□□□ -0.27
CPSF6-204ENST00000547486 HSD11B1LQ7Z5J1 315 aa13.37□□□□□ -0.27
CPSF6-204ENST00000547486 B3GNT8Q7Z7M8 397 aa13.37□□□□□ -0.27
CPSF6-204ENST00000547486 GKN2Q86XP6 184 aa13.37□□□□□ -0.27
CPSF6-204ENST00000547486 SDR16C5Q8N3Y7 309 aa13.37□□□□□ -0.27
CPSF6-204ENST00000547486 TEX26Q8N6G2 289 aa13.37□□□□□ -0.27
CPSF6-204ENST00000547486 ZNF248Q8NDW4 579 aa13.37□□□□□ -0.27
CPSF6-204ENST00000547486 GPR156Q8NFN8 814 aa13.37□□□□□ -0.27
CPSF6-204ENST00000547486 ATL2Q8NHH9 583 aa13.37□□□□□ -0.27
CPSF6-204ENST00000547486 GRAMD1AQ96CP6 724 aa13.37□□□□□ -0.27
CPSF6-204ENST00000547486 FCRL3Q96P31 734 aaPredicted RBP13.37□□□□□ -0.27
CPSF6-204ENST00000547486 LGMNQ99538 433 aa13.37□□□□□ -0.27
CPSF6-204ENST00000547486 IFNKQ9P0W0 207 aa13.37□□□□□ -0.27
CPSF6-204ENST00000547486 LUC7L2Q9Y383 392 aaKnown RBP13.37□□□□□ -0.27
CPSF6-204ENST00000547486 COL27A1Q8IZC6 1860 aaPredicted RBP13.37□□□□□ -0.27
CPSF6-204ENST00000547486 LRRK1Q38SD2 2015 aa13.36□□□□□ -0.27
CPSF6-204ENST00000547486 NPIPB15A6NHN6 443 aaPredicted RBP13.36□□□□□ -0.27
CPSF6-204ENST00000547486 MYO1FO00160 1098 aa13.36□□□□□ -0.27
CPSF6-204ENST00000547486 CACNB4O00305 520 aaPredicted RBP13.36□□□□□ -0.27
CPSF6-204ENST00000547486 TNFRSF10CO14798 259 aa13.36□□□□□ -0.27
CPSF6-204ENST00000547486 SOCS5O75159 536 aa13.36□□□□□ -0.27
CPSF6-204ENST00000547486 HEXIM1O94992 359 aaKnown RBP13.36□□□□□ -0.27
CPSF6-204ENST00000547486 PGLSO95336 258 aa13.36□□□□□ -0.27
CPSF6-204ENST00000547486 CPP00450 1065 aa13.36□□□□□ -0.27
CPSF6-204ENST00000547486 PDHA1P08559 390 aa13.36□□□□□ -0.27
CPSF6-204ENST00000547486 CTPS1P17812 591 aa13.36□□□□□ -0.27
CPSF6-204ENST00000547486 CASP14P31944 242 aa13.36□□□□□ -0.27
CPSF6-204ENST00000547486 VIPR1P32241 457 aa13.36□□□□□ -0.27
CPSF6-204ENST00000547486 HSPA9P38646 679 aaKnown RBP13.36□□□□□ -0.27
CPSF6-204ENST00000547486 ETV3P41162 512 aa13.36□□□□□ -0.27
CPSF6-204ENST00000547486 MMP13P45452 471 aa13.36□□□□□ -0.27
CPSF6-204ENST00000547486 TPM4P67936 248 aa13.36□□□□□ -0.27
CPSF6-204ENST00000547486 CXADRP78310 365 aa13.36□□□□□ -0.27
CPSF6-204ENST00000547486 SPIDRQ14159 915 aa13.36□□□□□ -0.27
CPSF6-204ENST00000547486 KRT81Q14533 505 aa13.36□□□□□ -0.27
CPSF6-204ENST00000547486 FOXR1Q6PIV2 292 aa13.36□□□□□ -0.27
CPSF6-204ENST00000547486 RFLNAQ6ZTI6 216 aa13.36□□□□□ -0.27
CPSF6-204ENST00000547486 TAF8Q7Z7C8 310 aa13.36□□□□□ -0.27
CPSF6-204ENST00000547486 TSPAN33Q86UF1 283 aa13.36□□□□□ -0.27
CPSF6-204ENST00000547486 ATPAF2Q8N5M1 289 aa13.36□□□□□ -0.27
CPSF6-204ENST00000547486 FAM46DQ8NEK8 389 aa13.36□□□□□ -0.27
CPSF6-204ENST00000547486 LRRN4Q8WUT4 740 aa13.36□□□□□ -0.27
CPSF6-204ENST00000547486 PTCD2Q8WV60 388 aaKnown RBP13.36□□□□□ -0.27
CPSF6-204ENST00000547486 PIH1D2Q8WWB5 315 aa13.36□□□□□ -0.27
CPSF6-204ENST00000547486 SCRN2Q96FV2 425 aa13.36□□□□□ -0.27
CPSF6-204ENST00000547486 UBL7Q96S82 380 aaPredicted RBP13.36□□□□□ -0.27
CPSF6-204ENST00000547486 SYNDIG1Q9H7V2 258 aa13.36□□□□□ -0.27
CPSF6-204ENST00000547486 CYP4F12Q9HCS2 524 aa13.36□□□□□ -0.27
CPSF6-204ENST00000547486 NT5MQ9NPB1 228 aa13.36□□□□□ -0.27
CPSF6-204ENST00000547486 PHTF1Q9UMS5 762 aa13.36□□□□□ -0.27
CPSF6-204ENST00000547486 PCDHGA8Q9Y5G5 932 aa13.36□□□□□ -0.27
CPSF6-204ENST00000547486 A0A1W2PQ67 120 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 86.6 ms